RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 LRP1BQ9NZR2 4599 aa9.12□□□□□ -0.95
CDK5RAP3-218ENST00000580391 DYNC1H1Q14204 4646 aaKnown RBP9.11□□□□□ -0.95
CDK5RAP3-218ENST00000580391 SCXQ7RTU7 201 aa9.11□□□□□ -0.95
CDK5RAP3-218ENST00000580391 LINC00846Q9NV44 126 aa9.11□□□□□ -0.95
CDK5RAP3-218ENST00000580391 SMIM29Q86T20 159 aa9.1□□□□□ -0.95
CDK5RAP3-218ENST00000580391 C1orf137Q5JT78 98 aa9.1□□□□□ -0.95
CDK5RAP3-218ENST00000580391 LINC00336Q6ZUF6 198 aa9.09□□□□□ -0.95
CDK5RAP3-218ENST00000580391 PDE6GP18545 87 aa9.08□□□□□ -0.96
CDK5RAP3-218ENST00000580391 SS18L2Q9UHA2 77 aa9.06□□□□□ -0.96
CDK5RAP3-218ENST00000580391 SPRR1BP22528 89 aa9.04□□□□□ -0.96
CDK5RAP3-218ENST00000580391 A0A1B0GVY2 172 aa9.03□□□□□ -0.96
CDK5RAP3-218ENST00000580391 LINC00643Q86TS7 51 aa9.03□□□□□ -0.96
CDK5RAP3-218ENST00000580391 F8WEM9 126 aa9.03□□□□□ -0.96
CDK5RAP3-218ENST00000580391 ZNF861PO60384 105 aa9.02□□□□□ -0.97
CDK5RAP3-218ENST00000580391 RYR3Q15413 4870 aa9.02□□□□□ -0.97
CDK5RAP3-218ENST00000580391 IGLV7-43P04211 117 aa9.01□□□□□ -0.97
CDK5RAP3-218ENST00000580391 A0A0G2JQZ4 141 aa9□□□□□ -0.97
CDK5RAP3-218ENST00000580391 A0A1W2PNM2 257 aa9□□□□□ -0.97
CDK5RAP3-218ENST00000580391 APOBP04114 4563 aaKnown RBP9□□□□□ -0.97
CDK5RAP3-218ENST00000580391 SPRR4Q96PI1 79 aa9□□□□□ -0.97
CDK5RAP3-218ENST00000580391 IGLV8-61A0A075B6I0 122 aa8.98□□□□□ -0.97
CDK5RAP3-218ENST00000580391 IGFL1Q6UW32 110 aa8.98□□□□□ -0.97
CDK5RAP3-218ENST00000580391 UBL5Q9BZL1 73 aa8.98□□□□□ -0.97
CDK5RAP3-218ENST00000580391 Q8NBF4 154 aa8.97□□□□□ -0.97
CDK5RAP3-218ENST00000580391 ANAPC13Q9BS18 74 aa8.97□□□□□ -0.97
CDK5RAP3-218ENST00000580391 VPS13BQ7Z7G8 4022 aa8.97□□□□□ -0.97
CDK5RAP3-218ENST00000580391 IGKV3D-7A0A0C4DH55 119 aa8.97□□□□□ -0.97
CDK5RAP3-218ENST00000580391 Q6JHZ5 121 aa8.97□□□□□ -0.97
CDK5RAP3-218ENST00000580391 Q6ZVQ6 151 aa8.97□□□□□ -0.97
CDK5RAP3-218ENST00000580391 TRBV7-7A0A0K0K1E9 115 aa8.96□□□□□ -0.98
CDK5RAP3-218ENST00000580391 LINC00483Q53H64 154 aa8.95□□□□□ -0.98
CDK5RAP3-218ENST00000580391 SMIM20Q8N5G0 67 aa8.95□□□□□ -0.98
CDK5RAP3-218ENST00000580391 ZNF706Q9Y5V0 76 aaPredicted RBP8.95□□□□□ -0.98
CDK5RAP3-218ENST00000580391 ANAPC11Q9NYG5 84 aa8.93□□□□□ -0.98
CDK5RAP3-218ENST00000580391 IGLV9-49A0A0B4J1Y8 123 aa8.92□□□□□ -0.98
CDK5RAP3-218ENST00000580391 Q6Q795 121 aa8.92□□□□□ -0.98
CDK5RAP3-218ENST00000580391 C9orf153Q5TBE3 101 aa8.9□□□□□ -0.99
CDK5RAP3-218ENST00000580391 ATP5EP2Q5VTU8 51 aa8.9□□□□□ -0.99
CDK5RAP3-218ENST00000580391 CRYGAP11844 174 aa8.89□□□□□ -0.99
CDK5RAP3-218ENST00000580391 C5orf47Q569G3 176 aa8.89□□□□□ -0.99
CDK5RAP3-218ENST00000580391 IMUPQ9GZP8 106 aa8.89□□□□□ -0.99
CDK5RAP3-218ENST00000580391 FAT1Q14517 4588 aa8.88□□□□□ -0.99
CDK5RAP3-218ENST00000580391 A0A1B0GW54 56 aa8.88□□□□□ -0.99
CDK5RAP3-218ENST00000580391 NREPQ16612 68 aa8.87□□□□□ -0.99
CDK5RAP3-218ENST00000580391 MOBPQ13875 183 aa8.86□□□□□ -0.99
CDK5RAP3-218ENST00000580391 A0A087WSZ3 146 aa8.85□□□□□ -0.99
CDK5RAP3-218ENST00000580391 A0A087WVE0 104 aa8.85□□□□□ -0.99
CDK5RAP3-218ENST00000580391 SMR3BP02814 79 aaPredicted RBP8.84□□□□□ -0.99
CDK5RAP3-218ENST00000580391 HIST1H4AP62805 103 aaKnown RBP8.84□□□□□ -0.99
CDK5RAP3-218ENST00000580391 FAM236AA0A1B0GUQ0 79 aa8.83□□□□□ -1
CDK5RAP3-218ENST00000580391 FAM236BA0A1B0GV22 79 aa8.83□□□□□ -1
CDK5RAP3-218ENST00000580391 RPL37AP61513 92 aaKnown RBP8.82□□□□□ -1
CDK5RAP3-218ENST00000580391 CXCL6P80162 114 aa8.82□□□□□ -1
CDK5RAP3-218ENST00000580391 BPY2O14599 106 aa8.79□□□□□ -1
CDK5RAP3-218ENST00000580391 HRCT1Q6UXD1 115 aa8.79□□□□□ -1
CDK5RAP3-218ENST00000580391 A0A087X002 238 aa8.78□□□□□ -1
CDK5RAP3-218ENST00000580391 Q8N9L7 120 aa8.78□□□□□ -1
CDK5RAP3-218ENST00000580391 KRTAP1-4P0C5Y4 121 aa8.77□□□□□ -1
CDK5RAP3-218ENST00000580391 CCDC179H3BU77 68 aa8.75□□□□□ -1.01
CDK5RAP3-218ENST00000580391 KRTAP13-2Q52LG2 175 aa8.75□□□□□ -1.01
CDK5RAP3-218ENST00000580391 DEFB116Q30KQ4 102 aa8.75□□□□□ -1.01
CDK5RAP3-218ENST00000580391 IGKV4-1P06312 121 aa8.74□□□□□ -1.01
CDK5RAP3-218ENST00000580391 HSPG2P98160 4391 aa8.74□□□□□ -1.01
CDK5RAP3-218ENST00000580391 KRTAP10-4P60372 401 aaPredicted RBP8.73□□□□□ -1.01
CDK5RAP3-218ENST00000580391 DSCR10P59022 87 aa8.73□□□□□ -1.01
CDK5RAP3-218ENST00000580391 FAM229BQ4G0N7 80 aa8.73□□□□□ -1.01
CDK5RAP3-218ENST00000580391 RYR1P21817 5038 aa8.72□□□□□ -1.01
CDK5RAP3-218ENST00000580391 SPINK6Q6UWN8 80 aa8.72□□□□□ -1.01
CDK5RAP3-218ENST00000580391 K7EQZ3 153 aa8.7□□□□□ -1.02
CDK5RAP3-218ENST00000580391 SSBP3-AS1Q7Z2R9 100 aa8.7□□□□□ -1.02
CDK5RAP3-218ENST00000580391 LINC00472Q9H8W2 130 aa8.7□□□□□ -1.02
CDK5RAP3-218ENST00000580391 PKHD1L1Q86WI1 4243 aa8.69□□□□□ -1.02
CDK5RAP3-218ENST00000580391 EPPK1P58107 5090 aaKnown RBP8.69□□□□□ -1.02
CDK5RAP3-218ENST00000580391 PLA2G1BP04054 148 aaKnown RBP8.68□□□□□ -1.02
CDK5RAP3-218ENST00000580391 ATOX1O00244 68 aa8.67□□□□□ -1.02
CDK5RAP3-218ENST00000580391 Q96NJ1 140 aa8.67□□□□□ -1.02
CDK5RAP3-218ENST00000580391 CD164Q04900 197 aa8.64□□□□□ -1.03
CDK5RAP3-218ENST00000580391 KIAA1109Q2LD37 5005 aa8.64□□□□□ -1.03
CDK5RAP3-218ENST00000580391 CDK2AP2O75956 126 aa8.62□□□□□ -1.03
CDK5RAP3-218ENST00000580391 PRR26Q8N8Z3 221 aa8.62□□□□□ -1.03
CDK5RAP3-218ENST00000580391 J3KT08 172 aa8.61□□□□□ -1.03
CDK5RAP3-218ENST00000580391 TYMSOSQ8TAI1 123 aa8.61□□□□□ -1.03
CDK5RAP3-218ENST00000580391 A8MWP4 228 aa8.6□□□□□ -1.03
CDK5RAP3-218ENST00000580391 FAM229AH3BQW9 127 aa8.58□□□□□ -1.04
CDK5RAP3-218ENST00000580391 UQCRQO14949 82 aa8.58□□□□□ -1.04
CDK5RAP3-218ENST00000580391 Q5VSD8 79 aa8.58□□□□□ -1.04
CDK5RAP3-218ENST00000580391 PRR15Q8IV56 129 aa8.58□□□□□ -1.04
CDK5RAP3-218ENST00000580391 HCG22E2RYF7 251 aa8.56□□□□□ -1.04
CDK5RAP3-218ENST00000580391 RPS28P62857 69 aaKnown RBP8.56□□□□□ -1.04
CDK5RAP3-218ENST00000580391 SERP2Q8N6R1 65 aa8.56□□□□□ -1.04
CDK5RAP3-218ENST00000580391 WFDC13Q8IUB5 93 aa8.55□□□□□ -1.04
CDK5RAP3-218ENST00000580391 KRTAP17-1Q9BYP8 105 aa8.55□□□□□ -1.04
CDK5RAP3-218ENST00000580391 COX7CP15954 63 aa8.54□□□□□ -1.04
CDK5RAP3-218ENST00000580391 ASB16-AS1Q495Z4 193 aa8.53□□□□□ -1.04
CDK5RAP3-218ENST00000580391 LRP1Q07954 4544 aaKnown RBP8.53□□□□□ -1.04
CDK5RAP3-218ENST00000580391 NDUFB1O75438 58 aa8.52□□□□□ -1.05
CDK5RAP3-218ENST00000580391 Q5XG85 94 aa8.52□□□□□ -1.05
CDK5RAP3-218ENST00000580391 LINC00304Q8N9R0 145 aa8.52□□□□□ -1.05
CDK5RAP3-218ENST00000580391 TRAV7A0A075B6U4 112 aa8.51□□□□□ -1.05
CDK5RAP3-218ENST00000580391 MMP24-AS1A0A0U1RRL7 71 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms