RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-208ENST00000579466 ANKRD39Q53RE8 183 aa4.91□□□□□ -1.62
MSI2-208ENST00000579466 COPS9Q8WXC6 57 aa4.91□□□□□ -1.62
MSI2-208ENST00000579466 TRBV20-1A0A075B6N2 111 aa4.9□□□□□ -1.63
MSI2-208ENST00000579466 TRAV13-2A0A0B4J235 113 aa4.9□□□□□ -1.63
MSI2-208ENST00000579466 C3orf79P0CE67 100 aa4.9□□□□□ -1.63
MSI2-208ENST00000579466 IFITM1P13164 125 aa4.9□□□□□ -1.63
MSI2-208ENST00000579466 Q6JHZ5 121 aa4.9□□□□□ -1.63
MSI2-208ENST00000579466 ATOH7Q8N100 152 aa4.9□□□□□ -1.63
MSI2-208ENST00000579466 LST1O00453 97 aa4.89□□□□□ -1.63
MSI2-208ENST00000579466 HIST1H2BKO60814 126 aa4.89□□□□□ -1.63
MSI2-208ENST00000579466 HIST1H2BJP06899 126 aa4.89□□□□□ -1.63
MSI2-208ENST00000579466 HIST1H2BOP23527 126 aa4.89□□□□□ -1.63
MSI2-208ENST00000579466 HIST1H2BBP33778 126 aa4.89□□□□□ -1.63
MSI2-208ENST00000579466 HIST1H2BDP58876 126 aa4.89□□□□□ -1.63
MSI2-208ENST00000579466 HIST1H2BCP62807 126 aa4.89□□□□□ -1.63
MSI2-208ENST00000579466 HIST2H2BEQ16778 126 aa4.89□□□□□ -1.63
MSI2-208ENST00000579466 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.89□□□□□ -1.63
MSI2-208ENST00000579466 HIST1H2BHQ93079 126 aa4.89□□□□□ -1.63
MSI2-208ENST00000579466 HIST1H2BNQ99877 126 aa4.89□□□□□ -1.63
MSI2-208ENST00000579466 HIST1H2BMQ99879 126 aa4.89□□□□□ -1.63
MSI2-208ENST00000579466 FAM236DA0A1B0GTK5 79 aa4.88□□□□□ -1.63
MSI2-208ENST00000579466 H3BUT2 72 aa4.88□□□□□ -1.63
MSI2-208ENST00000579466 MT2AP02795 61 aa4.88□□□□□ -1.63
MSI2-208ENST00000579466 FAM236CP0DP71 79 aa4.88□□□□□ -1.63
MSI2-208ENST00000579466 VAMP3Q15836 100 aa4.88□□□□□ -1.63
MSI2-208ENST00000579466 LINC00575Q6W349 94 aa4.88□□□□□ -1.63
MSI2-208ENST00000579466 KRTAP19-1Q8IUB9 90 aa4.88□□□□□ -1.63
MSI2-208ENST00000579466 hADV29S1A0JD25 119 aa4.87□□□□□ -1.63
MSI2-208ENST00000579466 OCIAD2Q56VL3 154 aa4.87□□□□□ -1.63
MSI2-208ENST00000579466 LCE2BO14633 110 aa4.86□□□□□ -1.63
MSI2-208ENST00000579466 Q6ZVH6 145 aa4.86□□□□□ -1.63
MSI2-208ENST00000579466 MT1FP04733 61 aa4.85□□□□□ -1.63
MSI2-208ENST00000579466 C20orf166-AS1Q96NR2 134 aa4.85□□□□□ -1.63
MSI2-208ENST00000579466 SNHG12Q9BXW3 62 aa4.85□□□□□ -1.63
MSI2-208ENST00000579466 A8MUU9 505 aa4.84□□□□□ -1.63
MSI2-208ENST00000579466 DSCR10P59022 87 aa4.84□□□□□ -1.63
MSI2-208ENST00000579466 KRTAP10-10P60014 251 aa4.83□□□□□ -1.64
MSI2-208ENST00000579466 C12orf57Q99622 126 aa4.83□□□□□ -1.64
MSI2-208ENST00000579466 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.82□□□□□ -1.64
MSI2-208ENST00000579466 SS18L2Q9UHA2 77 aa4.82□□□□□ -1.64
MSI2-208ENST00000579466 SIGMAR1Q99720 223 aa4.81□□□□□ -1.64
MSI2-208ENST00000579466 A0A087WSZ3 146 aa4.8□□□□□ -1.64
MSI2-208ENST00000579466 KRTAP9-3Q9BYQ3 159 aa4.8□□□□□ -1.64
MSI2-208ENST00000579466 KRTAP16-1A8MUX0 517 aa4.79□□□□□ -1.64
MSI2-208ENST00000579466 SCGB1D1O95968 90 aa4.79□□□□□ -1.64
MSI2-208ENST00000579466 PPDPFLQ8WWR9 84 aa4.78□□□□□ -1.64
MSI2-208ENST00000579466 COA6Q5JTJ3 125 aaKnown RBP4.77□□□□□ -1.65
MSI2-208ENST00000579466 BVES-AS1Q5T3Y7 98 aa4.77□□□□□ -1.65
MSI2-208ENST00000579466 RBM12B-AS1Q9P1G2 102 aa4.77□□□□□ -1.65
MSI2-208ENST00000579466 HRES1P13985 223 aa4.76□□□□□ -1.65
MSI2-208ENST00000579466 TEN1Q86WV5 123 aa4.76□□□□□ -1.65
MSI2-208ENST00000579466 NDUFV3P56181 108 aaKnown RBP4.75□□□□□ -1.65
MSI2-208ENST00000579466 A0A1B0GV72 72 aa4.73□□□□□ -1.65
MSI2-208ENST00000579466 HSBP1L1C9JCN9 74 aa4.73□□□□□ -1.65
MSI2-208ENST00000579466 LINC00313P59037 77 aa4.73□□□□□ -1.65
MSI2-208ENST00000579466 HIST1H4GQ99525 98 aa4.73□□□□□ -1.65
MSI2-208ENST00000579466 H3BMG7 143 aa4.72□□□□□ -1.65
MSI2-208ENST00000579466 IGKV4-1P06312 121 aa4.72□□□□□ -1.65
MSI2-208ENST00000579466 SNRPEP62304 92 aaKnown RBP4.72□□□□□ -1.65
MSI2-208ENST00000579466 DEFB116Q30KQ4 102 aa4.72□□□□□ -1.65
MSI2-208ENST00000579466 NOTCH2NLQ7Z3S9 236 aa4.72□□□□□ -1.65
MSI2-208ENST00000579466 MPLKIPQ8TAP9 179 aa4.72□□□□□ -1.65
MSI2-208ENST00000579466 FAM218AQ96MZ4 157 aa4.72□□□□□ -1.65
MSI2-208ENST00000579466 FABP2P12104 132 aa4.71□□□□□ -1.66
MSI2-208ENST00000579466 LINC00846Q9NV44 126 aa4.71□□□□□ -1.66
MSI2-208ENST00000579466 A0A1W2PNM2 257 aa4.7□□□□□ -1.66
MSI2-208ENST00000579466 SNCGO76070 127 aa4.7□□□□□ -1.66
MSI2-208ENST00000579466 IGHV6-1A0A0B4J1U7 121 aa4.69□□□□□ -1.66
MSI2-208ENST00000579466 KRTAP19-6Q3LI70 58 aa4.69□□□□□ -1.66
MSI2-208ENST00000579466 RAB37Q96AX2 223 aa4.69□□□□□ -1.66
MSI2-208ENST00000579466 MTURNQ8N3F0 131 aa4.67□□□□□ -1.66
MSI2-208ENST00000579466 H0YGX0 51 aa4.66□□□□□ -1.66
MSI2-208ENST00000579466 S100A2P29034 98 aa4.66□□□□□ -1.66
MSI2-208ENST00000579466 HIST1H2BLQ99880 126 aa4.66□□□□□ -1.66
MSI2-208ENST00000579466 HIST3H2BBQ8N257 126 aa4.65□□□□□ -1.67
MSI2-208ENST00000579466 ANKRD29Q8N6D5 301 aa4.65□□□□□ -1.67
MSI2-208ENST00000579466 Q8N9P0 234 aaPredicted RBP4.65□□□□□ -1.67
MSI2-208ENST00000579466 NEBP20929 6669 aa4.65□□□□□ -1.67
MSI2-208ENST00000579466 A0A0B4J2C4 111 aa4.62□□□□□ -1.67
MSI2-208ENST00000579466 TRBV7-4A0A0J9YYF1 115 aa4.62□□□□□ -1.67
MSI2-208ENST00000579466 GHRHP01286 108 aa4.62□□□□□ -1.67
MSI2-208ENST00000579466 TRACP01848 142 aa4.62□□□□□ -1.67
MSI2-208ENST00000579466 COX8AP10176 69 aa4.62□□□□□ -1.67
MSI2-208ENST00000579466 SPINK7P58062 85 aa4.62□□□□□ -1.67
MSI2-208ENST00000579466 KRTAP6-3Q3LI67 103 aa4.62□□□□□ -1.67
MSI2-208ENST00000579466 ZCCHC13Q8WW36 166 aaKnown RBP4.62□□□□□ -1.67
MSI2-208ENST00000579466 LINC00472Q9H8W2 130 aa4.62□□□□□ -1.67
MSI2-208ENST00000579466 A8MWP4 228 aa4.61□□□□□ -1.67
MSI2-208ENST00000579466 CCKP06307 115 aa4.61□□□□□ -1.67
MSI2-208ENST00000579466 S100A1P23297 94 aa4.61□□□□□ -1.67
MSI2-208ENST00000579466 WFDC13Q8IUB5 93 aa4.61□□□□□ -1.67
MSI2-208ENST00000579466 VPS25Q9BRG1 176 aa4.61□□□□□ -1.67
MSI2-208ENST00000579466 A0A1B0GVX0 72 aa4.6□□□□□ -1.67
MSI2-208ENST00000579466 C14orf144Q96I85 54 aa4.6□□□□□ -1.67
MSI2-208ENST00000579466 A0A1B0GX51 115 aa4.59□□□□□ -1.67
MSI2-208ENST00000579466 TRIAP1O43715 76 aa4.59□□□□□ -1.67
MSI2-208ENST00000579466 DNAL4O96015 105 aa4.59□□□□□ -1.67
MSI2-208ENST00000579466 ORMDL1Q9P0S3 153 aa4.59□□□□□ -1.67
MSI2-208ENST00000579466 C8orf87E5RJ46 101 aa4.58□□□□□ -1.68
MSI2-208ENST00000579466 PRO1854Q9UHT4 67 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms