RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 CEND1Q8N111 149 aa8.19□□□□□ -1.1
MKS1-207ENST00000578789 RAB37Q96AX2 223 aa8.18□□□□□ -1.1
MKS1-207ENST00000578789 hADV29S1A0JD25 119 aa8.16□□□□□ -1.1
MKS1-207ENST00000578789 TMEM238LA0A1B0GVL6 79 aa8.15□□□□□ -1.1
MKS1-207ENST00000578789 Q6ZQY7 126 aa8.15□□□□□ -1.1
MKS1-207ENST00000578789 PRO1933Q9H354 126 aa8.15□□□□□ -1.1
MKS1-207ENST00000578789 FXYD2P54710 66 aa8.14□□□□□ -1.11
MKS1-207ENST00000578789 CD164Q04900 197 aa8.14□□□□□ -1.11
MKS1-207ENST00000578789 H7C2G1 150 aa8.13□□□□□ -1.11
MKS1-207ENST00000578789 HSD52Q0P140 79 aa8.13□□□□□ -1.11
MKS1-207ENST00000578789 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.13□□□□□ -1.11
MKS1-207ENST00000578789 LIMD2Q9BT23 127 aa8.13□□□□□ -1.11
MKS1-207ENST00000578789 KRTAP13-3Q3SY46 172 aa8.11□□□□□ -1.11
MKS1-207ENST00000578789 HRCT1Q6UXD1 115 aa8.11□□□□□ -1.11
MKS1-207ENST00000578789 CDIP1Q9H305 208 aa8.11□□□□□ -1.11
MKS1-207ENST00000578789 UQCR10Q9UDW1 63 aa8.11□□□□□ -1.11
MKS1-207ENST00000578789 PRO1854Q9UHT4 67 aa8.11□□□□□ -1.11
MKS1-207ENST00000578789 H0YGX0 51 aa8.1□□□□□ -1.11
MKS1-207ENST00000578789 PPDPFLQ8WWR9 84 aa8.1□□□□□ -1.11
MKS1-207ENST00000578789 F8WEM9 126 aa8.09□□□□□ -1.11
MKS1-207ENST00000578789 IGLV8-61A0A075B6I0 122 aa8.08□□□□□ -1.12
MKS1-207ENST00000578789 Q5XG85 94 aa8.08□□□□□ -1.12
MKS1-207ENST00000578789 KRTAP4-8Q9BYQ9 185 aa8.08□□□□□ -1.12
MKS1-207ENST00000578789 MUC17Q685J3 4493 aa8.08□□□□□ -1.12
MKS1-207ENST00000578789 FAM218AQ96MZ4 157 aa8.07□□□□□ -1.12
MKS1-207ENST00000578789 A0A0G2JQZ4 141 aa8.06□□□□□ -1.12
MKS1-207ENST00000578789 A0A1B0GX51 115 aa8.05□□□□□ -1.12
MKS1-207ENST00000578789 OCIAD2Q56VL3 154 aa8.05□□□□□ -1.12
MKS1-207ENST00000578789 Q6JHZ5 121 aa8.05□□□□□ -1.12
MKS1-207ENST00000578789 TRIAP1O43715 76 aa8.04□□□□□ -1.12
MKS1-207ENST00000578789 SNCGO76070 127 aa8.04□□□□□ -1.12
MKS1-207ENST00000578789 K7ERJ3 54 aa8.03□□□□□ -1.12
MKS1-207ENST00000578789 CLEC2BQ92478 149 aa8.03□□□□□ -1.12
MKS1-207ENST00000578789 IGFL1Q6UW32 110 aa8.02□□□□□ -1.13
MKS1-207ENST00000578789 SMIM6P0DI80 62 aa8.01□□□□□ -1.13
MKS1-207ENST00000578789 SNHG12Q9BXW3 62 aa8.01□□□□□ -1.13
MKS1-207ENST00000578789 GHRHP01286 108 aa7.98□□□□□ -1.13
MKS1-207ENST00000578789 C1orf195Q5TG92 126 aa7.98□□□□□ -1.13
MKS1-207ENST00000578789 MUC2Q02817 5179 aa7.97□□□□□ -1.13
MKS1-207ENST00000578789 TRBV7-7A0A0K0K1E9 115 aa7.97□□□□□ -1.13
MKS1-207ENST00000578789 H3BUT2 72 aa7.97□□□□□ -1.13
MKS1-207ENST00000578789 TCL1BO95988 128 aa7.97□□□□□ -1.13
MKS1-207ENST00000578789 PSMB2P49721 201 aa7.97□□□□□ -1.13
MKS1-207ENST00000578789 COX6CP09669 75 aa7.96□□□□□ -1.14
MKS1-207ENST00000578789 NDUFV3P56181 108 aaKnown RBP7.96□□□□□ -1.14
MKS1-207ENST00000578789 ASB16-AS1Q495Z4 193 aa7.96□□□□□ -1.14
MKS1-207ENST00000578789 DNAL4O96015 105 aa7.93□□□□□ -1.14
MKS1-207ENST00000578789 Q6Q795 121 aa7.93□□□□□ -1.14
MKS1-207ENST00000578789 KRTAP9-2Q9BYQ4 174 aa7.93□□□□□ -1.14
MKS1-207ENST00000578789 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.92□□□□□ -1.14
MKS1-207ENST00000578789 H3BQ85 93 aa7.92□□□□□ -1.14
MKS1-207ENST00000578789 M0R143 59 aa7.92□□□□□ -1.14
MKS1-207ENST00000578789 FABP2P12104 132 aa7.92□□□□□ -1.14
MKS1-207ENST00000578789 SEC61BP60468 96 aaKnown RBP7.92□□□□□ -1.14
MKS1-207ENST00000578789 ORMDL1Q9P0S3 153 aa7.92□□□□□ -1.14
MKS1-207ENST00000578789 A0A0U1RQV1 116 aa7.9□□□□□ -1.14
MKS1-207ENST00000578789 LOC105371267A0A1B0GV96 52 aa7.9□□□□□ -1.14
MKS1-207ENST00000578789 H3BMG7 143 aa7.9□□□□□ -1.14
MKS1-207ENST00000578789 KRTAP9-6A0A140TA67 174 aa7.89□□□□□ -1.15
MKS1-207ENST00000578789 C9orf92A6NGG3 77 aa7.89□□□□□ -1.15
MKS1-207ENST00000578789 TRACP01848 142 aa7.89□□□□□ -1.15
MKS1-207ENST00000578789 LST1O00453 97 aa7.88□□□□□ -1.15
MKS1-207ENST00000578789 TEN1Q86WV5 123 aa7.88□□□□□ -1.15
MKS1-207ENST00000578789 TMEM256-PLSCR3K7ERE1 68 aa7.87□□□□□ -1.15
MKS1-207ENST00000578789 TSTD3H0UI37 97 aa7.86□□□□□ -1.15
MKS1-207ENST00000578789 SCGB1C2P0DMR2 95 aa7.86□□□□□ -1.15
MKS1-207ENST00000578789 SS18L2Q9UHA2 77 aa7.86□□□□□ -1.15
MKS1-207ENST00000578789 UBE2V1Q13404 147 aa7.84□□□□□ -1.15
MKS1-207ENST00000578789 KRTAP4-1Q9BYQ7 146 aa7.84□□□□□ -1.15
MKS1-207ENST00000578789 A0A1W2PNM2 257 aa7.83□□□□□ -1.16
MKS1-207ENST00000578789 A0A087WSZ3 146 aa7.82□□□□□ -1.16
MKS1-207ENST00000578789 FAT4Q6V0I7 4981 aa7.82□□□□□ -1.16
MKS1-207ENST00000578789 ANKRD29Q8N6D5 301 aa7.81□□□□□ -1.16
MKS1-207ENST00000578789 TRBV7-4A0A0J9YYF1 115 aa7.8□□□□□ -1.16
MKS1-207ENST00000578789 A0A1B0GV72 72 aa7.79□□□□□ -1.16
MKS1-207ENST00000578789 NAA38Q9BRA0 125 aaKnown RBP7.79□□□□□ -1.16
MKS1-207ENST00000578789 RPL37P61927 97 aaKnown RBP7.78□□□□□ -1.16
MKS1-207ENST00000578789 PCOTHQ58A44 107 aa7.78□□□□□ -1.16
MKS1-207ENST00000578789 Q96NJ1 140 aa7.78□□□□□ -1.16
MKS1-207ENST00000578789 ATXN8Q156A1 80 aa7.77□□□□□ -1.17
MKS1-207ENST00000578789 LCE3BQ5TA77 95 aa7.76□□□□□ -1.17
MKS1-207ENST00000578789 CCKP06307 115 aa7.75□□□□□ -1.17
MKS1-207ENST00000578789 BAALC-AS2P0C853 105 aa7.75□□□□□ -1.17
MKS1-207ENST00000578789 RBM3P98179 157 aaKnown RBP7.74□□□□□ -1.17
MKS1-207ENST00000578789 BATFQ16520 125 aa7.74□□□□□ -1.17
MKS1-207ENST00000578789 LYRM7Q5U5X0 104 aa7.74□□□□□ -1.17
MKS1-207ENST00000578789 OBSCN-AS1Q96MR7 158 aa7.73□□□□□ -1.17
MKS1-207ENST00000578789 DSCR8Q96T75 97 aa7.71□□□□□ -1.18
MKS1-207ENST00000578789 KRTAP4-12Q9BQ66 201 aa7.71□□□□□ -1.18
MKS1-207ENST00000578789 TRBV20-1A0A075B6N2 111 aa7.7□□□□□ -1.18
MKS1-207ENST00000578789 Q75L30 129 aa7.7□□□□□ -1.18
MKS1-207ENST00000578789 C9orf118A6NHY6 69 aa7.68□□□□□ -1.18
MKS1-207ENST00000578789 JMJD7-PLA2G4BH0Y9G9 81 aa7.68□□□□□ -1.18
MKS1-207ENST00000578789 SIGMAR1Q99720 223 aa7.68□□□□□ -1.18
MKS1-207ENST00000578789 LINC00472Q9H8W2 130 aa7.68□□□□□ -1.18
MKS1-207ENST00000578789 C9JAW5 83 aa7.67□□□□□ -1.18
MKS1-207ENST00000578789 TAX1BP3O14907 124 aa7.67□□□□□ -1.18
MKS1-207ENST00000578789 VPS25Q9BRG1 176 aa7.67□□□□□ -1.18
MKS1-207ENST00000578789 IGKV4-1P06312 121 aa7.66□□□□□ -1.18
MKS1-207ENST00000578789 C21orf62-AS1Q17RA5 79 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms