RNA–Protein interactions for RNA: ENST00000578148.1

RAB11FIP4-202, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 3

Gene RAB11FIP4, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-202ENST00000578148 HIST2H2BEQ16778 126 aa4.69□□□□□ -1.66
RAB11FIP4-202ENST00000578148 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.69□□□□□ -1.66
RAB11FIP4-202ENST00000578148 SCGB1D4Q6XE38 83 aa4.69□□□□□ -1.66
RAB11FIP4-202ENST00000578148 HIST1H2BHQ93079 126 aa4.69□□□□□ -1.66
RAB11FIP4-202ENST00000578148 HIST1H2BNQ99877 126 aa4.69□□□□□ -1.66
RAB11FIP4-202ENST00000578148 HIST1H2BMQ99879 126 aa4.69□□□□□ -1.66
RAB11FIP4-202ENST00000578148 NHP2Q9NX24 153 aaKnown RBP4.69□□□□□ -1.66
RAB11FIP4-202ENST00000578148 Q6ZVH6 145 aa4.68□□□□□ -1.66
RAB11FIP4-202ENST00000578148 A6NDN8 102 aa4.67□□□□□ -1.66
RAB11FIP4-202ENST00000578148 F8WEM9 126 aa4.66□□□□□ -1.66
RAB11FIP4-202ENST00000578148 C3orf79P0CE67 100 aa4.66□□□□□ -1.66
RAB11FIP4-202ENST00000578148 TRAV13-2A0A0B4J235 113 aa4.65□□□□□ -1.67
RAB11FIP4-202ENST00000578148 C20orf202A1L168 122 aa4.64□□□□□ -1.67
RAB11FIP4-202ENST00000578148 SCGB1D1O95968 90 aa4.64□□□□□ -1.67
RAB11FIP4-202ENST00000578148 MUSTN1Q8IVN3 82 aa4.64□□□□□ -1.67
RAB11FIP4-202ENST00000578148 SMIM11BQ8TCY0 68 aa4.64□□□□□ -1.67
RAB11FIP4-202ENST00000578148 CLEC2BQ92478 149 aa4.64□□□□□ -1.67
RAB11FIP4-202ENST00000578148 KRTDAPP60985 99 aa4.63□□□□□ -1.67
RAB11FIP4-202ENST00000578148 Q6JHZ5 121 aa4.63□□□□□ -1.67
RAB11FIP4-202ENST00000578148 Q75L30 129 aa4.63□□□□□ -1.67
RAB11FIP4-202ENST00000578148 TRBV7-7A0A0K0K1E9 115 aa4.62□□□□□ -1.67
RAB11FIP4-202ENST00000578148 COA6Q5JTJ3 125 aaKnown RBP4.62□□□□□ -1.67
RAB11FIP4-202ENST00000578148 SLC7A5P1Q8MH63 180 aa4.62□□□□□ -1.67
RAB11FIP4-202ENST00000578148 VAMP3Q15836 100 aa4.61□□□□□ -1.67
RAB11FIP4-202ENST00000578148 LINC00575Q6W349 94 aa4.61□□□□□ -1.67
RAB11FIP4-202ENST00000578148 ATP11AUNQ6ZP68 121 aa4.61□□□□□ -1.67
RAB11FIP4-202ENST00000578148 Q6ZQY7 126 aa4.61□□□□□ -1.67
RAB11FIP4-202ENST00000578148 PCP2Q8IVA1 136 aa4.61□□□□□ -1.67
RAB11FIP4-202ENST00000578148 IGFL1Q6UW32 110 aa4.6□□□□□ -1.67
RAB11FIP4-202ENST00000578148 ATOH7Q8N100 152 aa4.6□□□□□ -1.67
RAB11FIP4-202ENST00000578148 OBSCN-AS1Q96MR7 158 aa4.6□□□□□ -1.67
RAB11FIP4-202ENST00000578148 hADV29S1A0JD25 119 aa4.59□□□□□ -1.67
RAB11FIP4-202ENST00000578148 Q6Q795 121 aa4.59□□□□□ -1.67
RAB11FIP4-202ENST00000578148 CFC1P0CG37 223 aa4.58□□□□□ -1.68
RAB11FIP4-202ENST00000578148 OCIAD2Q56VL3 154 aa4.58□□□□□ -1.68
RAB11FIP4-202ENST00000578148 PPDPFLQ8WWR9 84 aa4.58□□□□□ -1.68
RAB11FIP4-202ENST00000578148 SNRPEP62304 92 aaKnown RBP4.57□□□□□ -1.68
RAB11FIP4-202ENST00000578148 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.57□□□□□ -1.68
RAB11FIP4-202ENST00000578148 LST1O00453 97 aa4.56□□□□□ -1.68
RAB11FIP4-202ENST00000578148 KRTAP19-1Q8IUB9 90 aa4.56□□□□□ -1.68
RAB11FIP4-202ENST00000578148 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.55□□□□□ -1.68
RAB11FIP4-202ENST00000578148 C20orf166-AS1Q96NR2 134 aa4.55□□□□□ -1.68
RAB11FIP4-202ENST00000578148 SS18L2Q9UHA2 77 aa4.55□□□□□ -1.68
RAB11FIP4-202ENST00000578148 SSPOA2VEC9 5147 aa4.55□□□□□ -1.68
RAB11FIP4-202ENST00000578148 KRTAP9-7A8MTY7 169 aa4.54□□□□□ -1.68
RAB11FIP4-202ENST00000578148 Q96NJ1 140 aa4.54□□□□□ -1.68
RAB11FIP4-202ENST00000578148 KRTAP9-8Q9BYQ0 159 aa4.54□□□□□ -1.68
RAB11FIP4-202ENST00000578148 KRTAP4-8Q9BYQ9 185 aa4.54□□□□□ -1.68
RAB11FIP4-202ENST00000578148 USH2AO75445 5202 aa4.54□□□□□ -1.68
RAB11FIP4-202ENST00000578148 A8MUU9 505 aa4.53□□□□□ -1.68
RAB11FIP4-202ENST00000578148 H3BUT2 72 aa4.53□□□□□ -1.68
RAB11FIP4-202ENST00000578148 BVES-AS1Q5T3Y7 98 aa4.53□□□□□ -1.68
RAB11FIP4-202ENST00000578148 SNHG12Q9BXW3 62 aa4.53□□□□□ -1.68
RAB11FIP4-202ENST00000578148 KRTAP4-12Q9BQ66 201 aa4.52□□□□□ -1.69
RAB11FIP4-202ENST00000578148 TRBV20-1A0A075B6N2 111 aa4.51□□□□□ -1.69
RAB11FIP4-202ENST00000578148 HSBP1L1C9JCN9 74 aa4.51□□□□□ -1.69
RAB11FIP4-202ENST00000578148 TEN1Q86WV5 123 aa4.5□□□□□ -1.69
RAB11FIP4-202ENST00000578148 C12orf57Q99622 126 aa4.5□□□□□ -1.69
RAB11FIP4-202ENST00000578148 A0A087WSZ3 146 aa4.48□□□□□ -1.69
RAB11FIP4-202ENST00000578148 HIST1H2BLQ99880 126 aa4.48□□□□□ -1.69
RAB11FIP4-202ENST00000578148 A0A0A0MQY5 61 aa4.47□□□□□ -1.69
RAB11FIP4-202ENST00000578148 SNCGO76070 127 aa4.47□□□□□ -1.69
RAB11FIP4-202ENST00000578148 MT2AP02795 61 aa4.47□□□□□ -1.69
RAB11FIP4-202ENST00000578148 HIST3H2BBQ8N257 126 aa4.47□□□□□ -1.69
RAB11FIP4-202ENST00000578148 HIST1H4GQ99525 98 aa4.47□□□□□ -1.69
RAB11FIP4-202ENST00000578148 FCGBPQ9Y6R7 5405 aaPredicted RBP4.46□□□□□ -1.69
RAB11FIP4-202ENST00000578148 S100A2P29034 98 aa4.46□□□□□ -1.7
RAB11FIP4-202ENST00000578148 NDUFV3P56181 108 aaKnown RBP4.46□□□□□ -1.7
RAB11FIP4-202ENST00000578148 DSCR10P59022 87 aa4.46□□□□□ -1.7
RAB11FIP4-202ENST00000578148 FAM236DA0A1B0GTK5 79 aa4.45□□□□□ -1.7
RAB11FIP4-202ENST00000578148 H0YGX0 51 aa4.45□□□□□ -1.7
RAB11FIP4-202ENST00000578148 FAM236CP0DP71 79 aa4.45□□□□□ -1.7
RAB11FIP4-202ENST00000578148 MPLKIPQ8TAP9 179 aa4.45□□□□□ -1.7
RAB11FIP4-202ENST00000578148 SIGMAR1Q99720 223 aa4.45□□□□□ -1.7
RAB11FIP4-202ENST00000578148 A0A0B4J2C4 111 aa4.44□□□□□ -1.7
RAB11FIP4-202ENST00000578148 COX8AP10176 69 aa4.44□□□□□ -1.7
RAB11FIP4-202ENST00000578148 FAM218AQ96MZ4 157 aa4.44□□□□□ -1.7
RAB11FIP4-202ENST00000578148 H3BMG7 143 aa4.43□□□□□ -1.7
RAB11FIP4-202ENST00000578148 MT1FP04733 61 aa4.43□□□□□ -1.7
RAB11FIP4-202ENST00000578148 RAB37Q96AX2 223 aa4.43□□□□□ -1.7
RAB11FIP4-202ENST00000578148 PAM16Q9Y3D7 125 aa4.43□□□□□ -1.7
RAB11FIP4-202ENST00000578148 A0A1B0GX51 115 aa4.42□□□□□ -1.7
RAB11FIP4-202ENST00000578148 A0A1W2PNM2 257 aa4.42□□□□□ -1.7
RAB11FIP4-202ENST00000578148 KRTAP16-1A8MUX0 517 aa4.42□□□□□ -1.7
RAB11FIP4-202ENST00000578148 DLEU1O43261 78 aa4.42□□□□□ -1.7
RAB11FIP4-202ENST00000578148 HRES1P13985 223 aa4.42□□□□□ -1.7
RAB11FIP4-202ENST00000578148 LINC00313P59037 77 aa4.42□□□□□ -1.7
RAB11FIP4-202ENST00000578148 RBM12B-AS1Q9P1G2 102 aa4.42□□□□□ -1.7
RAB11FIP4-202ENST00000578148 IGKV4-1P06312 121 aa4.4□□□□□ -1.71
RAB11FIP4-202ENST00000578148 FABP2P12104 132 aa4.4□□□□□ -1.71
RAB11FIP4-202ENST00000578148 LCE3BQ5TA77 95 aa4.4□□□□□ -1.71
RAB11FIP4-202ENST00000578148 KRTAP9-3Q9BYQ3 159 aa4.4□□□□□ -1.71
RAB11FIP4-202ENST00000578148 HIGD1BQ9P298 99 aa4.4□□□□□ -1.71
RAB11FIP4-202ENST00000578148 TRBV7-4A0A0J9YYF1 115 aa4.39□□□□□ -1.71
RAB11FIP4-202ENST00000578148 KRTAP10-10P60014 251 aa4.39□□□□□ -1.71
RAB11FIP4-202ENST00000578148 S100A6P06703 90 aa4.38□□□□□ -1.71
RAB11FIP4-202ENST00000578148 MACF1Q9UPN3 7388 aaKnown RBP4.37□□□□□ -1.71
RAB11FIP4-202ENST00000578148 NOTCH2NLQ7Z3S9 236 aa4.37□□□□□ -1.71
RAB11FIP4-202ENST00000578148 ANKRD29Q8N6D5 301 aa4.37□□□□□ -1.71
RAB11FIP4-202ENST00000578148 H3BQ85 93 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms