RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 C5orf42Q9H799 3197 aa5.85□□□□□ -1.47
CDH8-203ENST00000577390 Q8N9P0 234 aaPredicted RBP5.85□□□□□ -1.47
CDH8-203ENST00000577390 S4R3F8 94 aa5.85□□□□□ -1.47
CDH8-203ENST00000577390 FRYQ5TBA9 3013 aa5.85□□□□□ -1.47
CDH8-203ENST00000577390 CHD9Q3L8U1 2897 aa5.84□□□□□ -1.47
CDH8-203ENST00000577390 CSAG1Q6PB30 78 aa5.83□□□□□ -1.48
CDH8-203ENST00000577390 H3BNG1 76 aa5.83□□□□□ -1.48
CDH8-203ENST00000577390 C10orf142B7Z368 130 aa5.82□□□□□ -1.48
CDH8-203ENST00000577390 HIVEP1P15822 2718 aa5.82□□□□□ -1.48
CDH8-203ENST00000577390 ASB16-AS1Q495Z4 193 aa5.82□□□□□ -1.48
CDH8-203ENST00000577390 ZNF292O60281 2723 aa5.82□□□□□ -1.48
CDH8-203ENST00000577390 GVQW2A0A096LPI5 108 aaPredicted RBP5.81□□□□□ -1.48
CDH8-203ENST00000577390 A6NN06 94 aa5.81□□□□□ -1.48
CDH8-203ENST00000577390 KCNQ1DNQ9H478 68 aa5.8□□□□□ -1.48
CDH8-203ENST00000577390 IGLV7-43P04211 117 aa5.8□□□□□ -1.48
CDH8-203ENST00000577390 PRAC1Q96KF2 57 aa5.8□□□□□ -1.48
CDH8-203ENST00000577390 FLNCQ14315 2725 aa5.79□□□□□ -1.48
CDH8-203ENST00000577390 A0A087WTM6 91 aa5.79□□□□□ -1.48
CDH8-203ENST00000577390 IGFL1Q6UW32 110 aa5.79□□□□□ -1.48
CDH8-203ENST00000577390 A0A1B0GU33 70 aa5.78□□□□□ -1.48
CDH8-203ENST00000577390 KLK9Q2XQG4 91 aa5.78□□□□□ -1.48
CDH8-203ENST00000577390 SEC61BP60468 96 aaKnown RBP5.77□□□□□ -1.49
CDH8-203ENST00000577390 NSD1Q96L73 2696 aaPredicted RBP5.76□□□□□ -1.49
CDH8-203ENST00000577390 FLNBO75369 2602 aaKnown RBP5.75□□□□□ -1.49
CDH8-203ENST00000577390 C15orf56Q8N910 161 aa5.75□□□□□ -1.49
CDH8-203ENST00000577390 VPS13AQ96RL7 3174 aa5.75□□□□□ -1.49
CDH8-203ENST00000577390 A0A0G2JQZ4 141 aa5.74□□□□□ -1.49
CDH8-203ENST00000577390 A0A1W2PNN7 141 aa5.74□□□□□ -1.49
CDH8-203ENST00000577390 TRIOO75962 3097 aa5.74□□□□□ -1.49
CDH8-203ENST00000577390 CHD7Q9P2D1 2997 aa5.73□□□□□ -1.49
CDH8-203ENST00000577390 SRRM2Q9UQ35 2752 aaKnown RBP5.73□□□□□ -1.49
CDH8-203ENST00000577390 Q8NAQ8 132 aa5.73□□□□□ -1.49
CDH8-203ENST00000577390 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.73□□□□□ -1.49
CDH8-203ENST00000577390 K7EIL1 84 aa5.72□□□□□ -1.49
CDH8-203ENST00000577390 LINC01558Q9Y6Z2 57 aa5.72□□□□□ -1.49
CDH8-203ENST00000577390 A0A1W2PNM2 257 aa5.71□□□□□ -1.49
CDH8-203ENST00000577390 M0QZ58 72 aa5.7□□□□□ -1.5
CDH8-203ENST00000577390 A0A096LNT2 108 aa5.7□□□□□ -1.5
CDH8-203ENST00000577390 MKI67P46013 3256 aaKnown RBP5.69□□□□□ -1.5
CDH8-203ENST00000577390 FRYLO94915 3013 aa5.69□□□□□ -1.5
CDH8-203ENST00000577390 LINC00612Q8N6U2 182 aa5.68□□□□□ -1.5
CDH8-203ENST00000577390 DMAC1Q96GE9 116 aa5.68□□□□□ -1.5
CDH8-203ENST00000577390 NF1P21359 2839 aa5.68□□□□□ -1.5
CDH8-203ENST00000577390 C20orf166-AS1Q96NR2 134 aa5.67□□□□□ -1.5
CDH8-203ENST00000577390 IGSF10Q6WRI0 2623 aa5.66□□□□□ -1.5
CDH8-203ENST00000577390 ASH1LQ9NR48 2969 aaKnown RBP5.66□□□□□ -1.5
CDH8-203ENST00000577390 KRTAP10-11P60412 298 aa5.65□□□□□ -1.5
CDH8-203ENST00000577390 LAMA1P25391 3075 aa5.65□□□□□ -1.51
CDH8-203ENST00000577390 BRCA2P51587 3418 aa5.64□□□□□ -1.51
CDH8-203ENST00000577390 TNRC18O15417 2968 aaPredicted RBP5.64□□□□□ -1.51
CDH8-203ENST00000577390 ROMO1P60602 79 aa5.64□□□□□ -1.51
CDH8-203ENST00000577390 ZCCHC13Q8WW36 166 aaKnown RBP5.64□□□□□ -1.51
CDH8-203ENST00000577390 Q8N377 158 aa5.64□□□□□ -1.51
CDH8-203ENST00000577390 PRUNE2Q8WUY3 3088 aa5.64□□□□□ -1.51
CDH8-203ENST00000577390 CASC10Q5T4H9 136 aa5.63□□□□□ -1.51
CDH8-203ENST00000577390 SPRR4Q96PI1 79 aa5.63□□□□□ -1.51
CDH8-203ENST00000577390 ZANQ9Y493 2812 aa5.63□□□□□ -1.51
CDH8-203ENST00000577390 A0A087X002 238 aa5.62□□□□□ -1.51
CDH8-203ENST00000577390 P0C880 135 aa5.62□□□□□ -1.51
CDH8-203ENST00000577390 A0A1W2PPR1 153 aa5.61□□□□□ -1.51
CDH8-203ENST00000577390 LCE6AA0A183 80 aa5.61□□□□□ -1.51
CDH8-203ENST00000577390 TNP2Q05952 138 aa5.6□□□□□ -1.51
CDH8-203ENST00000577390 ITPR2Q14571 2701 aa5.6□□□□□ -1.51
CDH8-203ENST00000577390 KMT2BQ9UMN6 2715 aaPredicted RBP5.6□□□□□ -1.51
CDH8-203ENST00000577390 PDZD2O15018 2839 aa5.59□□□□□ -1.52
CDH8-203ENST00000577390 A8MU10 97 aa5.57□□□□□ -1.52
CDH8-203ENST00000577390 RANBP2P49792 3224 aaKnown RBP5.57□□□□□ -1.52
CDH8-203ENST00000577390 LAMA3Q16787 3333 aa5.57□□□□□ -1.52
CDH8-203ENST00000577390 NIPBLQ6KC79 2804 aaeCLIP5.56□□□□□ -1.52
CDH8-203ENST00000577390 CELSR3Q9NYQ7 3312 aa5.56□□□□□ -1.52
CDH8-203ENST00000577390 VCANP13611 3396 aa5.56□□□□□ -1.52
CDH8-203ENST00000577390 HRNRQ86YZ3 2850 aaPredicted RBP5.55□□□□□ -1.52
CDH8-203ENST00000577390 ADM2Q7Z4H4 148 aa5.54□□□□□ -1.52
CDH8-203ENST00000577390 KRTAP16-1A8MUX0 517 aa5.53□□□□□ -1.52
CDH8-203ENST00000577390 FREM2Q5SZK8 3169 aa5.51□□□□□ -1.53
CDH8-203ENST00000577390 SPATA8Q6RVD6 105 aa5.51□□□□□ -1.53
CDH8-203ENST00000577390 UNC80Q8N2C7 3258 aa5.49□□□□□ -1.53
CDH8-203ENST00000577390 RPL37P61927 97 aaKnown RBP5.48□□□□□ -1.53
CDH8-203ENST00000577390 MXRA5Q9NR99 2828 aa5.48□□□□□ -1.53
CDH8-203ENST00000577390 C19orf73Q9NVV2 129 aa5.48□□□□□ -1.53
CDH8-203ENST00000577390 CDH23Q9H251 3354 aa5.48□□□□□ -1.53
CDH8-203ENST00000577390 DMXL1Q9Y485 3027 aa5.48□□□□□ -1.53
CDH8-203ENST00000577390 CRYBG3Q68DQ2 2970 aa5.47□□□□□ -1.53
CDH8-203ENST00000577390 CELSR2Q9HCU4 2923 aa5.47□□□□□ -1.53
CDH8-203ENST00000577390 PRR34Q9NV39 138 aa5.47□□□□□ -1.53
CDH8-203ENST00000577390 Q8NDZ9 215 aa5.46□□□□□ -1.54
CDH8-203ENST00000577390 REV3LO60673 3130 aa5.46□□□□□ -1.54
CDH8-203ENST00000577390 FBN2P35556 2912 aa5.46□□□□□ -1.54
CDH8-203ENST00000577390 CNBPP62633 177 aaKnown RBP5.45□□□□□ -1.54
CDH8-203ENST00000577390 TGP01266 2768 aa5.45□□□□□ -1.54
CDH8-203ENST00000577390 DNAH14Q0VDD8 3507 aa5.44□□□□□ -1.54
CDH8-203ENST00000577390 ZZEF1O43149 2961 aa5.44□□□□□ -1.54
CDH8-203ENST00000577390 SZT2Q5T011 3432 aa5.43□□□□□ -1.54
CDH8-203ENST00000577390 KRTAP25-1Q3LHN0 102 aa5.41□□□□□ -1.54
CDH8-203ENST00000577390 ATMQ13315 3056 aa5.4□□□□□ -1.54
CDH8-203ENST00000577390 MMP24-AS1A0A0U1RRL7 71 aa5.4□□□□□ -1.55
CDH8-203ENST00000577390 COL12A1Q99715 3063 aa5.39□□□□□ -1.55
CDH8-203ENST00000577390 Q6ZR54 194 aa5.39□□□□□ -1.55
CDH8-203ENST00000577390 DCHS2Q6V1P9 2916 aa5.38□□□□□ -1.55
CDH8-203ENST00000577390 HTTP42858 3142 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms