RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 DEFB110Q30KQ9 67 aa0.36□□□□□ -2.35
COPS3-213ENST00000577210 MINOS1Q5TGZ0 78 aa0.36□□□□□ -2.35
COPS3-213ENST00000577210 DEFB108BQ8NET1 73 aa0.36□□□□□ -2.35
COPS3-213ENST00000577210 KAAG1Q9UBP8 84 aa0.36□□□□□ -2.35
COPS3-213ENST00000577210 WNK1Q9H4A3 2382 aa0.36□□□□□ -2.35
COPS3-213ENST00000577210 HECTD1Q9ULT8 2610 aa0.36□□□□□ -2.35
COPS3-213ENST00000577210 ANKRD36CQ5JPF3 1778 aa0.36□□□□□ -2.35
COPS3-213ENST00000577210 LRRK2Q5S007 2527 aa0.36□□□□□ -2.35
COPS3-213ENST00000577210 POLQO75417 2590 aa0.36□□□□□ -2.35
COPS3-213ENST00000577210 EPG5Q9HCE0 2579 aa0.36□□□□□ -2.35
COPS3-213ENST00000577210 SPTAN1Q13813 2472 aaKnown RBP0.36□□□□□ -2.35
COPS3-213ENST00000577210 ASXL3Q9C0F0 2248 aa0.36□□□□□ -2.35
COPS3-213ENST00000577210 LY75O60449 1722 aa0.35□□□□□ -2.35
COPS3-213ENST00000577210 TJP1Q07157 1748 aa0.35□□□□□ -2.35
COPS3-213ENST00000577210 FRAS1Q86XX4 4008 aa0.35□□□□□ -2.35
COPS3-213ENST00000577210 UBR1Q8IWV7 1749 aa0.35□□□□□ -2.35
COPS3-213ENST00000577210 DDX60Q8IY21 1712 aaKnown RBP0.35□□□□□ -2.35
COPS3-213ENST00000577210 PARP4Q9UKK3 1724 aaKnown RBP0.35□□□□□ -2.35
COPS3-213ENST00000577210 A0A0C4DFX4 3053 aa0.35□□□□□ -2.35
COPS3-213ENST00000577210 DMBT1Q9UGM3 2413 aaPredicted RBP0.35□□□□□ -2.35
COPS3-213ENST00000577210 RGPD8O14715 1765 aaPredicted RBP0.35□□□□□ -2.35
COPS3-213ENST00000577210 RGPD5Q99666 1765 aa0.35□□□□□ -2.35
COPS3-213ENST00000577210 SCN11AQ9UI33 1791 aa0.35□□□□□ -2.35
COPS3-213ENST00000577210 CSPG4Q6UVK1 2322 aa0.35□□□□□ -2.35
COPS3-213ENST00000577210 PCNX1Q96RV3 2341 aa0.35□□□□□ -2.35
COPS3-213ENST00000577210 PTPRQQ9UMZ3 2332 aa0.35□□□□□ -2.35
COPS3-213ENST00000577210 C5P01031 1676 aa0.35□□□□□ -2.35
COPS3-213ENST00000577210 ZNF831Q5JPB2 1677 aa0.35□□□□□ -2.35
COPS3-213ENST00000577210 LMO7Q8WWI1 1683 aa0.35□□□□□ -2.35
COPS3-213ENST00000577210 FAM208AQ9UK61 1670 aaKnown RBP0.35□□□□□ -2.35
COPS3-213ENST00000577210 SPTY2D1-AS1A0A0U1RR47 76 aa0.35□□□□□ -2.35
COPS3-213ENST00000577210 A0A1B0GU69 56 aa0.35□□□□□ -2.35
COPS3-213ENST00000577210 LYNX1G3V0Z9 82 aa0.35□□□□□ -2.35
COPS3-213ENST00000577210 K7EQZ3 153 aa0.35□□□□□ -2.35
COPS3-213ENST00000577210 APELAP0DMC3 54 aa0.35□□□□□ -2.35
COPS3-213ENST00000577210 DEFB1P60022 68 aa0.35□□□□□ -2.35
COPS3-213ENST00000577210 CLPSL2Q6UWE3 100 aa0.35□□□□□ -2.35
COPS3-213ENST00000577210 RHPN1-AS1Q9BWJ2 59 aa0.35□□□□□ -2.35
COPS3-213ENST00000577210 CRIPTQ9P021 101 aa0.35□□□□□ -2.35
COPS3-213ENST00000577210 TEP1Q99973 2627 aaKnown RBP0.35□□□□□ -2.35
COPS3-213ENST00000577210 KIF20BQ96Q89 1820 aa0.35□□□□□ -2.35
COPS3-213ENST00000577210 NCOR2Q9Y618 2525 aa0.35□□□□□ -2.35
COPS3-213ENST00000577210 MEGF8Q7Z7M0 2845 aa0.35□□□□□ -2.35
COPS3-213ENST00000577210 RGPD1P0DJD0 1748 aa0.35□□□□□ -2.35
COPS3-213ENST00000577210 RICTORQ6R327 1708 aa0.35□□□□□ -2.35
COPS3-213ENST00000577210 LRRIQ1Q96JM4 1722 aa0.35□□□□□ -2.35
COPS3-213ENST00000577210 TOGARAM1Q9Y4F4 1720 aa0.35□□□□□ -2.35
COPS3-213ENST00000577210 ABCA2Q9BZC7 2435 aa0.35□□□□□ -2.35
COPS3-213ENST00000577210 PDCD11Q14690 1871 aaKnown RBP0.35□□□□□ -2.35
COPS3-213ENST00000577210 PTPN13Q12923 2485 aa0.35□□□□□ -2.35
COPS3-213ENST00000577210 PPLO60437 1756 aa0.34□□□□□ -2.35
COPS3-213ENST00000577210 NBEAQ8NFP9 2946 aa0.34□□□□□ -2.35
COPS3-213ENST00000577210 ZFYVE26Q68DK2 2539 aa0.34□□□□□ -2.35
COPS3-213ENST00000577210 PLCH1Q4KWH8 1693 aa0.34□□□□□ -2.35
COPS3-213ENST00000577210 TSC2P49815 1807 aa0.34□□□□□ -2.35
COPS3-213ENST00000577210 SONP18583 2426 aaKnown RBP0.34□□□□□ -2.35
COPS3-213ENST00000577210 DSPP15924 2871 aaKnown RBP0.34□□□□□ -2.35
COPS3-213ENST00000577210 MMP24-AS1A0A0U1RRL7 71 aa0.34□□□□□ -2.36
COPS3-213ENST00000577210 SPRR1AP35321 89 aa0.34□□□□□ -2.36
COPS3-213ENST00000577210 DEFB131AP59861 70 aa0.34□□□□□ -2.36
COPS3-213ENST00000577210 DEFB109BQ30KR1 87 aa0.34□□□□□ -2.36
COPS3-213ENST00000577210 WFDC13Q8IUB5 93 aa0.34□□□□□ -2.36
COPS3-213ENST00000577210 USMG5Q96IX5 58 aa0.34□□□□□ -2.36
COPS3-213ENST00000577210 FMN2Q9NZ56 1722 aa0.34□□□□□ -2.36
COPS3-213ENST00000577210 TOMM7Q9P0U1 55 aa0.34□□□□□ -2.36
COPS3-213ENST00000577210 MYO9AB2RTY4 2548 aa0.34□□□□□ -2.36
COPS3-213ENST00000577210 ANKHD1Q8IWZ3 2542 aaKnown RBP0.34□□□□□ -2.36
COPS3-213ENST00000577210 PIEZO1Q92508 2521 aa0.34□□□□□ -2.36
COPS3-213ENST00000577210 F8P00451 2351 aa0.34□□□□□ -2.36
COPS3-213ENST00000577210 LTN1O94822 1766 aa0.34□□□□□ -2.36
COPS3-213ENST00000577210 SPTBN4Q9H254 2564 aa0.34□□□□□ -2.36
COPS3-213ENST00000577210 C3P01024 1663 aa0.33□□□□□ -2.36
COPS3-213ENST00000577210 IGF2RP11717 2491 aa0.33□□□□□ -2.36
COPS3-213ENST00000577210 PKD1L2Q7Z442 2459 aa0.33□□□□□ -2.36
COPS3-213ENST00000577210 ACACAQ13085 2346 aa0.33□□□□□ -2.36
COPS3-213ENST00000577210 NF1P21359 2839 aa0.33□□□□□ -2.36
COPS3-213ENST00000577210 TLN2Q9Y4G6 2542 aa0.33□□□□□ -2.36
COPS3-213ENST00000577210 UBR3Q6ZT12 1888 aa0.33□□□□□ -2.36
COPS3-213ENST00000577210 LRRC37AA6NMS7 1700 aa0.33□□□□□ -2.36
COPS3-213ENST00000577210 NRAPQ86VF7 1730 aa0.33□□□□□ -2.36
COPS3-213ENST00000577210 HIVEP3Q5T1R4 2406 aa0.33□□□□□ -2.36
COPS3-213ENST00000577210 FAM208BQ5VWN6 2430 aa0.33□□□□□ -2.36
COPS3-213ENST00000577210 SPG11Q96JI7 2443 aa0.33□□□□□ -2.36
COPS3-213ENST00000577210 RGPD2P0DJD1 1756 aa0.33□□□□□ -2.36
COPS3-213ENST00000577210 BCORQ6W2J9 1755 aa0.33□□□□□ -2.36
COPS3-213ENST00000577210 USP24Q9UPU5 2620 aa0.33□□□□□ -2.36
COPS3-213ENST00000577210 H0YAA0 97 aa0.33□□□□□ -2.36
COPS3-213ENST00000577210 H3BUA1 57 aa0.33□□□□□ -2.36
COPS3-213ENST00000577210 SPINK1P00995 79 aa0.33□□□□□ -2.36
COPS3-213ENST00000577210 DEFB133Q30KQ1 61 aa0.33□□□□□ -2.36
COPS3-213ENST00000577210 WFDC10BQ8IUB3 73 aa0.33□□□□□ -2.36
COPS3-213ENST00000577210 DEFB105AQ8NG35 78 aa0.33□□□□□ -2.36
COPS3-213ENST00000577210 MRPL34Q9BQ48 92 aaKnown RBP0.33□□□□□ -2.36
COPS3-213ENST00000577210 C6orf48Q9UBA6 75 aa0.33□□□□□ -2.36
COPS3-213ENST00000577210 U3KQA8 63 aa0.33□□□□□ -2.36
COPS3-213ENST00000577210 TLN1Q9Y490 2541 aaKnown RBP0.33□□□□□ -2.36
COPS3-213ENST00000577210 NHSQ6T4R5 1651 aa0.33□□□□□ -2.36
COPS3-213ENST00000577210 SETD2Q9BYW2 2564 aaPredicted RBP0.33□□□□□ -2.36
COPS3-213ENST00000577210 ITPR1Q14643 2758 aa0.33□□□□□ -2.36
COPS3-213ENST00000577210 DOT1LQ8TEK3 1739 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 340.7 ms