RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 RP1L1Q8IWN7 2480 aaPredicted RBP2.61□□□□□ -1.99
TSR1-203ENST00000575049 KMT2BQ9UMN6 2715 aaPredicted RBP2.61□□□□□ -1.99
TSR1-203ENST00000575049 HCG22E2RYF7 251 aa2.61□□□□□ -1.99
TSR1-203ENST00000575049 H3BNG1 76 aa2.61□□□□□ -1.99
TSR1-203ENST00000575049 SPRR1AP35321 89 aa2.61□□□□□ -1.99
TSR1-203ENST00000575049 LCE3AQ5TA76 89 aa2.61□□□□□ -1.99
TSR1-203ENST00000575049 Q5VV11 94 aa2.61□□□□□ -1.99
TSR1-203ENST00000575049 LIMD2Q9BT23 127 aa2.61□□□□□ -1.99
TSR1-203ENST00000575049 DCHS1Q96JQ0 3298 aa2.61□□□□□ -1.99
TSR1-203ENST00000575049 EP300Q09472 2414 aaPredicted RBP2.61□□□□□ -1.99
TSR1-203ENST00000575049 HRNRQ86YZ3 2850 aaPredicted RBP2.61□□□□□ -1.99
TSR1-203ENST00000575049 ADGRG4Q8IZF6 3080 aa2.6□□□□□ -1.99
TSR1-203ENST00000575049 CACNA1HO95180 2353 aa2.6□□□□□ -1.99
TSR1-203ENST00000575049 PRRC2CQ9Y520 2896 aaKnown RBP2.6□□□□□ -1.99
TSR1-203ENST00000575049 SPART-AS1P0CW21 52 aa2.6□□□□□ -1.99
TSR1-203ENST00000575049 CNBPP62633 177 aaKnown RBP2.6□□□□□ -1.99
TSR1-203ENST00000575049 Q6ZRX8 168 aa2.6□□□□□ -1.99
TSR1-203ENST00000575049 LOC101927531A0A1B0GV80 90 aa2.59□□□□□ -1.99
TSR1-203ENST00000575049 K7EQZ3 153 aa2.59□□□□□ -1.99
TSR1-203ENST00000575049 IGFL1Q6UW32 110 aa2.59□□□□□ -1.99
TSR1-203ENST00000575049 DEFB105AQ8NG35 78 aa2.59□□□□□ -1.99
TSR1-203ENST00000575049 COL6A6A6NMZ7 2263 aa2.59□□□□□ -1.99
TSR1-203ENST00000575049 DCHS2Q6V1P9 2916 aa2.59□□□□□ -1.99
TSR1-203ENST00000575049 ANKRD11Q6UB99 2663 aaPredicted RBP2.59□□□□□ -2
TSR1-203ENST00000575049 SMG1Q96Q15 3661 aaKnown RBP2.58□□□□□ -2
TSR1-203ENST00000575049 CR1P17927 2039 aa2.58□□□□□ -2
TSR1-203ENST00000575049 IGKV2-24A0A0C4DH68 120 aa2.58□□□□□ -2
TSR1-203ENST00000575049 LINC00208Q96KT6 92 aa2.58□□□□□ -2
TSR1-203ENST00000575049 PTPRZ1P23471 2315 aaPredicted RBP2.58□□□□□ -2
TSR1-203ENST00000575049 ACACAQ13085 2346 aa2.58□□□□□ -2
TSR1-203ENST00000575049 AKAP13Q12802 2813 aa2.57□□□□□ -2
TSR1-203ENST00000575049 TACC2O95359 2948 aa2.57□□□□□ -2
TSR1-203ENST00000575049 SPTBN1Q01082 2364 aaKnown RBP2.57□□□□□ -2
TSR1-203ENST00000575049 MGAQ8IWI9 3026 aa2.57□□□□□ -2
TSR1-203ENST00000575049 PRB1P04280 392 aa2.57□□□□□ -2
TSR1-203ENST00000575049 PTPRQQ9UMZ3 2332 aa2.57□□□□□ -2
TSR1-203ENST00000575049 ZFHX4Q86UP3 3567 aa2.56□□□□□ -2
TSR1-203ENST00000575049 CHKB-CPT1BH3BT56 60 aa2.56□□□□□ -2
TSR1-203ENST00000575049 DEFB4AO15263 64 aa2.56□□□□□ -2
TSR1-203ENST00000575049 DEFB135Q30KP9 77 aa2.56□□□□□ -2
TSR1-203ENST00000575049 PLAC8Q9NZF1 115 aa2.56□□□□□ -2
TSR1-203ENST00000575049 H0Y9P7 68 aa2.55□□□□□ -2
TSR1-203ENST00000575049 HTN3P15516 51 aa2.55□□□□□ -2
TSR1-203ENST00000575049 LINC01556Q5JQF7 62 aa2.55□□□□□ -2
TSR1-203ENST00000575049 WFDC10BQ8IUB3 73 aa2.55□□□□□ -2
TSR1-203ENST00000575049 BOD1L1Q8NFC6 3051 aa2.55□□□□□ -2
TSR1-203ENST00000575049 SORL1Q92673 2214 aa2.55□□□□□ -2
TSR1-203ENST00000575049 PRR15LQ9BU68 103 aa2.55□□□□□ -2
TSR1-203ENST00000575049 CDC42SE1Q9NRR8 79 aa2.55□□□□□ -2
TSR1-203ENST00000575049 TLN1Q9Y490 2541 aaKnown RBP2.55□□□□□ -2
TSR1-203ENST00000575049 DMDP11532 3685 aa2.55□□□□□ -2
TSR1-203ENST00000575049 CSMD1Q96PZ7 3565 aa2.55□□□□□ -2
TSR1-203ENST00000575049 LRBAP50851 2863 aa2.55□□□□□ -2
TSR1-203ENST00000575049 BDP1A6H8Y1 2624 aa2.55□□□□□ -2
TSR1-203ENST00000575049 BSNQ9UPA5 3926 aa2.54□□□□□ -2
TSR1-203ENST00000575049 KRTAP10-8P60410 259 aa2.54□□□□□ -2
TSR1-203ENST00000575049 WFDC13Q8IUB5 93 aa2.54□□□□□ -2
TSR1-203ENST00000575049 LINC01558Q9Y6Z2 57 aa2.54□□□□□ -2
TSR1-203ENST00000575049 PRB2P02812 416 aaPredicted RBP2.53□□□□□ -2
TSR1-203ENST00000575049 SPRR1BP22528 89 aa2.53□□□□□ -2
TSR1-203ENST00000575049 CSAG1Q6PB30 78 aa2.53□□□□□ -2
TSR1-203ENST00000575049 COA5Q86WW8 74 aa2.53□□□□□ -2
TSR1-203ENST00000575049 SPTAN1Q13813 2472 aaKnown RBP2.53□□□□□ -2
TSR1-203ENST00000575049 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.53□□□□□ -21e-7■■■■□ 19.4
TSR1-203ENST00000575049 ZNF292O60281 2723 aa2.53□□□□□ -2
TSR1-203ENST00000575049 MAST4O15021 2626 aa2.53□□□□□ -2.01
TSR1-203ENST00000575049 LINC00472Q9H8W2 130 aa2.52□□□□□ -2.01
TSR1-203ENST00000575049 CELSR1Q9NYQ6 3014 aa2.52□□□□□ -2.01
TSR1-203ENST00000575049 WNK1Q9H4A3 2382 aa2.51□□□□□ -2.01
TSR1-203ENST00000575049 SETXQ7Z333 2677 aaKnown RBP2.51□□□□□ -2.01
TSR1-203ENST00000575049 MMP24-AS1A0A0U1RRL7 71 aa2.51□□□□□ -2.01
TSR1-203ENST00000575049 LINC00304Q8N9R0 145 aa2.51□□□□□ -2.01
TSR1-203ENST00000575049 TP53AIP1Q9HCN2 124 aa2.51□□□□□ -2.01
TSR1-203ENST00000575049 ATMQ13315 3056 aa2.51□□□□□ -2.01
TSR1-203ENST00000575049 DMXL1Q9Y485 3027 aa2.5□□□□□ -2.01
TSR1-203ENST00000575049 GVINP1Q7Z2Y8 2422 aa2.5□□□□□ -2.01
TSR1-203ENST00000575049 CREBBPQ92793 2442 aa2.5□□□□□ -2.01
TSR1-203ENST00000575049 AKAP6Q13023 2319 aa2.5□□□□□ -2.01
TSR1-203ENST00000575049 RPL37AP61513 92 aaKnown RBP2.5□□□□□ -2.01
TSR1-203ENST00000575049 SPTSSBQ8NFR3 76 aa2.5□□□□□ -2.01
TSR1-203ENST00000575049 PIEZO1Q92508 2521 aa2.5□□□□□ -2.01
TSR1-203ENST00000575049 HIVEP3Q5T1R4 2406 aa2.5□□□□□ -2.01
TSR1-203ENST00000575049 SPTA1P02549 2419 aa2.49□□□□□ -2.01
TSR1-203ENST00000575049 ZFHX2Q9C0A1 2572 aaPredicted RBP2.49□□□□□ -2.01
TSR1-203ENST00000575049 DEFB131BA0A096LNP1 70 aa2.49□□□□□ -2.01
TSR1-203ENST00000575049 NUPR2A6NF83 97 aa2.48□□□□□ -2.01
TSR1-203ENST00000575049 ZNF462Q96JM2 2506 aa2.47□□□□□ -2.01
TSR1-203ENST00000575049 ASPMQ8IZT6 3477 aa2.47□□□□□ -2.01
TSR1-203ENST00000575049 SPINK7P58062 85 aa2.47□□□□□ -2.01
TSR1-203ENST00000575049 DMAC1Q96GE9 116 aa2.47□□□□□ -2.01
TSR1-203ENST00000575049 C2CD3Q4AC94 2353 aa2.47□□□□□ -2.01
TSR1-203ENST00000575049 CSPG4Q6UVK1 2322 aa2.47□□□□□ -2.01
TSR1-203ENST00000575049 NAV2Q8IVL1 2488 aa2.47□□□□□ -2.01
TSR1-203ENST00000575049 USP9XQ93008 2570 aaPredicted RBP2.47□□□□□ -2.01
TSR1-203ENST00000575049 OBSCNQ5VST9 7968 aa2.46□□□□□ -2.02
TSR1-203ENST00000575049 PRLHP81277 87 aa2.46□□□□□ -2.02
TSR1-203ENST00000575049 SPAG11AQ6PDA7 123 aa2.46□□□□□ -2.02
TSR1-203ENST00000575049 MUC3AQ02505 3323 aa2.46□□□□□ -2.02
TSR1-203ENST00000575049 DOPEY1Q5JWR5 2465 aa2.46□□□□□ -2.02
TSR1-203ENST00000575049 PCOTHQ58A44 107 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms