RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 FAM30AQ9NZY2 134 aa5.59□□□□□ -1.51
NCBP3-204ENST00000574911 CHTF8P0CG12 524 aa5.59□□□□□ -1.52
NCBP3-204ENST00000574911 HIGD2AQ9BW72 106 aa5.59□□□□□ -1.52
NCBP3-204ENST00000574911 C4orf26Q17RF5 130 aa5.58□□□□□ -1.52
NCBP3-204ENST00000574911 H0Y9J4 135 aa5.58□□□□□ -1.52
NCBP3-204ENST00000574911 LRCOL1A6NCL2 159 aa5.57□□□□□ -1.52
NCBP3-204ENST00000574911 SPRR1BP22528 89 aa5.57□□□□□ -1.52
NCBP3-204ENST00000574911 V9GYY9 64 aa5.57□□□□□ -1.52
NCBP3-204ENST00000574911 DNAH7Q8WXX0 4024 aa5.57□□□□□ -1.52
NCBP3-204ENST00000574911 UBE2AP49459 152 aa5.57□□□□□ -1.52
NCBP3-204ENST00000574911 C9orf163Q8N9P6 203 aa5.57□□□□□ -1.52
NCBP3-204ENST00000574911 NBEAL1Q6ZS30 2694 aa5.57□□□□□ -1.52
NCBP3-204ENST00000574911 PLECQ15149 4684 aaKnown RBP5.56□□□□□ -1.52
NCBP3-204ENST00000574911 HCG22E2RYF7 251 aa5.55□□□□□ -1.52
NCBP3-204ENST00000574911 B9D2Q9BPU9 175 aa5.55□□□□□ -1.52
NCBP3-204ENST00000574911 A0A087WSZ3 146 aa5.55□□□□□ -1.52
NCBP3-204ENST00000574911 PKIGQ9Y2B9 76 aa5.55□□□□□ -1.52
NCBP3-204ENST00000574911 NBDYA0A0U1RRE5 68 aa5.54□□□□□ -1.52
NCBP3-204ENST00000574911 SMIM26A0A096LP01 95 aa5.54□□□□□ -1.52
NCBP3-204ENST00000574911 COL6A5A8TX70 2615 aa5.54□□□□□ -1.52
NCBP3-204ENST00000574911 DEFB116Q30KQ4 102 aa5.54□□□□□ -1.52
NCBP3-204ENST00000574911 HRCT1Q6UXD1 115 aa5.54□□□□□ -1.52
NCBP3-204ENST00000574911 Q6ZRN7 208 aaPredicted RBP5.54□□□□□ -1.52
NCBP3-204ENST00000574911 ZCCHC13Q8WW36 166 aaKnown RBP5.54□□□□□ -1.52
NCBP3-204ENST00000574911 CSMD3Q7Z407 3707 aa5.53□□□□□ -1.52
NCBP3-204ENST00000574911 FP248Q71RG6 208 aaPredicted RBP5.53□□□□□ -1.52
NCBP3-204ENST00000574911 COL7A1Q02388 2944 aa5.53□□□□□ -1.52
NCBP3-204ENST00000574911 LINC00474Q9P2X8 69 aa5.52□□□□□ -1.53
NCBP3-204ENST00000574911 PANO1I0J062 215 aa5.52□□□□□ -1.53
NCBP3-204ENST00000574911 KRTAP13-1Q8IUC0 172 aa5.52□□□□□ -1.53
NCBP3-204ENST00000574911 MDFIQ99750 246 aa5.51□□□□□ -1.53
NCBP3-204ENST00000574911 NUPR2A6NF83 97 aa5.51□□□□□ -1.53
NCBP3-204ENST00000574911 RPL37AP61513 92 aaKnown RBP5.5□□□□□ -1.53
NCBP3-204ENST00000574911 KRTAP29-1A8MX34 341 aaPredicted RBP5.5□□□□□ -1.53
NCBP3-204ENST00000574911 LINC00472Q9H8W2 130 aa5.49□□□□□ -1.53
NCBP3-204ENST00000574911 FAM229BQ4G0N7 80 aa5.49□□□□□ -1.53
NCBP3-204ENST00000574911 WFDC13Q8IUB5 93 aa5.49□□□□□ -1.53
NCBP3-204ENST00000574911 SPACA4Q8TDM5 124 aa5.48□□□□□ -1.53
NCBP3-204ENST00000574911 VPS13DQ5THJ4 4388 aa5.48□□□□□ -1.53
NCBP3-204ENST00000574911 PRR15Q8IV56 129 aa5.47□□□□□ -1.53
NCBP3-204ENST00000574911 STAB2Q8WWQ8 2551 aa5.47□□□□□ -1.53
NCBP3-204ENST00000574911 A8MWP4 228 aa5.47□□□□□ -1.53
NCBP3-204ENST00000574911 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.47□□□□□ -1.53
NCBP3-204ENST00000574911 STARD9Q9P2P6 4700 aa5.46□□□□□ -1.54
NCBP3-204ENST00000574911 MGAM2Q2M2H8 2515 aa5.46□□□□□ -1.54
NCBP3-204ENST00000574911 LINC00336Q6ZUF6 198 aa5.46□□□□□ -1.54
NCBP3-204ENST00000574911 CASC2Q6XLA1 102 aa5.45□□□□□ -1.54
NCBP3-204ENST00000574911 A0A087WTM6 91 aa5.45□□□□□ -1.54
NCBP3-204ENST00000574911 hDV103S1A0JD37 113 aa5.45□□□□□ -1.54
NCBP3-204ENST00000574911 HECTD4Q9Y4D8 3996 aa5.44□□□□□ -1.54
NCBP3-204ENST00000574911 MP68P56378 58 aa5.44□□□□□ -1.54
NCBP3-204ENST00000574911 LINC00483Q53H64 154 aa5.44□□□□□ -1.54
NCBP3-204ENST00000574911 CYP4F30PQ9H0H9 118 aa5.43□□□□□ -1.54
NCBP3-204ENST00000574911 PRKDCP78527 4128 aaKnown RBP5.43□□□□□ -1.54
NCBP3-204ENST00000574911 NDUFB1O75438 58 aa5.43□□□□□ -1.54
NCBP3-204ENST00000574911 TRAV22A0A0B4J277 110 aa5.42□□□□□ -1.54
NCBP3-204ENST00000574911 DNAH17Q9UFH2 4485 aa5.42□□□□□ -1.54
NCBP3-204ENST00000574911 C1orf64Q8NEQ6 169 aa5.42□□□□□ -1.54
NCBP3-204ENST00000574911 IGLV9-49A0A0B4J1Y8 123 aa5.41□□□□□ -1.54
NCBP3-204ENST00000574911 MMP24-AS1A0A0U1RRL7 71 aa5.41□□□□□ -1.54
NCBP3-204ENST00000574911 H3BPC8 53 aa5.41□□□□□ -1.54
NCBP3-204ENST00000574911 Q96NJ1 140 aa5.41□□□□□ -1.54
NCBP3-204ENST00000574911 SRRM2Q9UQ35 2752 aaKnown RBP5.41□□□□□ -1.54
NCBP3-204ENST00000574911 DNAH2Q9P225 4427 aa5.41□□□□□ -1.54
NCBP3-204ENST00000574911 H0Y9P7 68 aa5.41□□□□□ -1.54
NCBP3-204ENST00000574911 LINC00208Q96KT6 92 aa5.41□□□□□ -1.54
NCBP3-204ENST00000574911 RTL8CO15255 209 aa5.4□□□□□ -1.54
NCBP3-204ENST00000574911 MPLKIPQ8TAP9 179 aa5.4□□□□□ -1.54
NCBP3-204ENST00000574911 ZNF706Q9Y5V0 76 aaPredicted RBP5.4□□□□□ -1.55
NCBP3-204ENST00000574911 IGLV5-52A0A0A0MRZ9 124 aa5.39□□□□□ -1.55
NCBP3-204ENST00000574911 Q6ZR54 194 aa5.39□□□□□ -1.55
NCBP3-204ENST00000574911 PLAC8Q9NZF1 115 aa5.39□□□□□ -1.55
NCBP3-204ENST00000574911 PSORS1C2Q9UIG4 136 aa5.39□□□□□ -1.55
NCBP3-204ENST00000574911 PRO0628Q9UI54 55 aa5.39□□□□□ -1.55
NCBP3-204ENST00000574911 ASB16-AS1Q495Z4 193 aa5.39□□□□□ -1.55
NCBP3-204ENST00000574911 WWC2-AS2Q96NR7 200 aa5.39□□□□□ -1.55
NCBP3-204ENST00000574911 TENM2Q9NT68 2774 aa5.39□□□□□ -1.55
NCBP3-204ENST00000574911 DNAH8Q96JB1 4490 aa5.38□□□□□ -1.55
NCBP3-204ENST00000574911 MOBPQ13875 183 aa5.38□□□□□ -1.55
NCBP3-204ENST00000574911 PRR4Q16378 134 aa5.38□□□□□ -1.55
NCBP3-204ENST00000574911 SPANXA2-OT1Q8N9U9 137 aa5.37□□□□□ -1.55
NCBP3-204ENST00000574911 ZNF861PO60384 105 aa5.37□□□□□ -1.55
NCBP3-204ENST00000574911 Q1T7F1 81 aa5.36□□□□□ -1.55
NCBP3-204ENST00000574911 KMT2AQ03164 3969 aa5.35□□□□□ -1.55
NCBP3-204ENST00000574911 C8orf17Q9NRJ1 99 aa5.35□□□□□ -1.55
NCBP3-204ENST00000574911 ANAPC11Q9NYG5 84 aa5.34□□□□□ -1.55
NCBP3-204ENST00000574911 FRAS1Q86XX4 4008 aa5.33□□□□□ -1.56
NCBP3-204ENST00000574911 A0A1B0GVX0 72 aa5.33□□□□□ -1.56
NCBP3-204ENST00000574911 TP53AIP1Q9HCN2 124 aa5.33□□□□□ -1.56
NCBP3-204ENST00000574911 C1orf134Q5TEV5 83 aa5.32□□□□□ -1.56
NCBP3-204ENST00000574911 IGHV6-1A0A0B4J1U7 121 aa5.31□□□□□ -1.56
NCBP3-204ENST00000574911 IGLV7-43P04211 117 aa5.31□□□□□ -1.56
NCBP3-204ENST00000574911 CD164Q04900 197 aa5.31□□□□□ -1.56
NCBP3-204ENST00000574911 BRK1Q8WUW1 75 aa5.3□□□□□ -1.56
NCBP3-204ENST00000574911 DNAH6Q9C0G6 4158 aa5.3□□□□□ -1.56
NCBP3-204ENST00000574911 H3BS24 57 aa5.3□□□□□ -1.56
NCBP3-204ENST00000574911 CDK2AP2O75956 126 aa5.3□□□□□ -1.56
NCBP3-204ENST00000574911 FBN3Q75N90 2809 aa5.29□□□□□ -1.56
NCBP3-204ENST00000574911 ALMS1Q8TCU4 4167 aa5.29□□□□□ -1.56
NCBP3-204ENST00000574911 IGLV7-46A0A075B6I9 117 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms