RNA–Protein interactions for RNA: ENST00000570473.5

TRIM25-203, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 498 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-203ENST00000570473 SPART-AS1P0CW21 52 aa4.44□□□□□ -1.7
TRIM25-203ENST00000570473 C2CD3Q4AC94 2353 aa4.42□□□□□ -1.7
TRIM25-203ENST00000570473 KRTAP4-8A0A0G2JLE6 195 aa4.42□□□□□ -1.7
TRIM25-203ENST00000570473 KRTAP10-8P60410 259 aa4.42□□□□□ -1.7
TRIM25-203ENST00000570473 GVINP1Q7Z2Y8 2422 aa4.41□□□□□ -1.7
TRIM25-203ENST00000570473 A0A096LNI7 61 aa4.41□□□□□ -1.7
TRIM25-203ENST00000570473 HIVEP2P31629 2446 aa4.41□□□□□ -1.7
TRIM25-203ENST00000570473 FN1P02751 2386 aaKnown RBP4.4□□□□□ -1.7
TRIM25-203ENST00000570473 MAP1AP78559 2803 aaPredicted RBP4.4□□□□□ -1.71
TRIM25-203ENST00000570473 FRYLO94915 3013 aa4.39□□□□□ -1.71
TRIM25-203ENST00000570473 EP300Q09472 2414 aaPredicted RBP4.39□□□□□ -1.71
TRIM25-203ENST00000570473 KRTAP9-9Q9BYP9 154 aa4.39□□□□□ -1.71
TRIM25-203ENST00000570473 KRTAP9-4Q9BYQ2 154 aa4.39□□□□□ -1.71
TRIM25-203ENST00000570473 RP1L1Q8IWN7 2480 aaPredicted RBP4.39□□□□□ -1.71
TRIM25-203ENST00000570473 CELSR2Q9HCU4 2923 aa4.38□□□□□ -1.71
TRIM25-203ENST00000570473 FAM208BQ5VWN6 2430 aa4.38□□□□□ -1.71
TRIM25-203ENST00000570473 SZT2Q5T011 3432 aa4.38□□□□□ -1.71
TRIM25-203ENST00000570473 CFAP47Q6ZTR5 3102 aa4.36□□□□□ -1.71
TRIM25-203ENST00000570473 KRTAP10-6P60371 365 aaPredicted RBP4.36□□□□□ -1.71
TRIM25-203ENST00000570473 SPINK6Q6UWN8 80 aa4.36□□□□□ -1.71
TRIM25-203ENST00000570473 SPTBN5Q9NRC6 3674 aaKnown RBP4.35□□□□□ -1.71
TRIM25-203ENST00000570473 OTOGLQ3ZCN5 2332 aa4.35□□□□□ -1.71
TRIM25-203ENST00000570473 NCOR1O75376 2440 aa4.35□□□□□ -1.71
TRIM25-203ENST00000570473 UBR5O95071 2799 aaPredicted RBP4.34□□□□□ -1.71
TRIM25-203ENST00000570473 KALRNO60229 2985 aa4.34□□□□□ -1.71
TRIM25-203ENST00000570473 MKI67P46013 3256 aaKnown RBP4.34□□□□□ -1.71
TRIM25-203ENST00000570473 A0A0D9SG42 100 aa4.34□□□□□ -1.71
TRIM25-203ENST00000570473 KRTAP12-1P59990 96 aa4.34□□□□□ -1.71
TRIM25-203ENST00000570473 AKAP13Q12802 2813 aa4.33□□□□□ -1.72
TRIM25-203ENST00000570473 Q5VSD8 79 aa4.33□□□□□ -1.72
TRIM25-203ENST00000570473 ITPR1Q14643 2758 aa4.32□□□□□ -1.72
TRIM25-203ENST00000570473 ROS1P08922 2347 aa4.32□□□□□ -1.72
TRIM25-203ENST00000570473 M0QZ58 72 aa4.32□□□□□ -1.72
TRIM25-203ENST00000570473 CSPG4Q6UVK1 2322 aa4.32□□□□□ -1.72
TRIM25-203ENST00000570473 WDFY4Q6ZS81 3184 aa4.3□□□□□ -1.72
TRIM25-203ENST00000570473 KRTAP3-1Q9BYR8 98 aa4.3□□□□□ -1.72
TRIM25-203ENST00000570473 DSPP15924 2871 aaKnown RBP4.29□□□□□ -1.72
TRIM25-203ENST00000570473 KRTAP13-4Q3LI77 160 aa4.29□□□□□ -1.72
TRIM25-203ENST00000570473 KRTAP4-7Q9BYR0 210 aa4.29□□□□□ -1.72
TRIM25-203ENST00000570473 ZNF462Q96JM2 2506 aa4.28□□□□□ -1.72
TRIM25-203ENST00000570473 UNC80Q8N2C7 3258 aa4.27□□□□□ -1.73
TRIM25-203ENST00000570473 TRIOO75962 3097 aa4.26□□□□□ -1.73
TRIM25-203ENST00000570473 DNAH12Q6ZR08 3092 aa4.26□□□□□ -1.73
TRIM25-203ENST00000570473 BOD1L1Q8NFC6 3051 aa4.26□□□□□ -1.73
TRIM25-203ENST00000570473 FRYQ5TBA9 3013 aa4.25□□□□□ -1.73
TRIM25-203ENST00000570473 CREBBPQ92793 2442 aa4.23□□□□□ -1.73
TRIM25-203ENST00000570473 NCOR2Q9Y618 2525 aa4.23□□□□□ -1.73
TRIM25-203ENST00000570473 ANKHD1Q8IWZ3 2542 aaKnown RBP4.22□□□□□ -1.73
TRIM25-203ENST00000570473 HTN3P15516 51 aa4.22□□□□□ -1.73
TRIM25-203ENST00000570473 LCE1DQ5T752 114 aa4.22□□□□□ -1.73
TRIM25-203ENST00000570473 LRBAP50851 2863 aa4.21□□□□□ -1.74
TRIM25-203ENST00000570473 SPG11Q96JI7 2443 aa4.21□□□□□ -1.74
TRIM25-203ENST00000570473 VWFP04275 2813 aa4.19□□□□□ -1.74
TRIM25-203ENST00000570473 ABCA2Q9BZC7 2435 aa4.19□□□□□ -1.74
TRIM25-203ENST00000570473 REV3LO60673 3130 aa4.18□□□□□ -1.74
TRIM25-203ENST00000570473 DMDP11532 3685 aa4.18□□□□□ -1.74
TRIM25-203ENST00000570473 TRANK1O15050 2925 aa4.18□□□□□ -1.74
TRIM25-203ENST00000570473 A0A1B0GVY2 172 aa4.18□□□□□ -1.74
TRIM25-203ENST00000570473 XIRP2A4UGR9 3374 aa4.17□□□□□ -1.74
TRIM25-203ENST00000570473 USP34Q70CQ2 3546 aa4.17□□□□□ -1.74
TRIM25-203ENST00000570473 ATRXP46100 2492 aa4.17□□□□□ -1.74
TRIM25-203ENST00000570473 HTTP42858 3142 aa4.16□□□□□ -1.74
TRIM25-203ENST00000570473 CHD9Q3L8U1 2897 aa4.16□□□□□ -1.74
TRIM25-203ENST00000570473 AKAP9Q99996 3911 aa4.15□□□□□ -1.74
TRIM25-203ENST00000570473 CRYBG3Q68DQ2 2970 aa4.15□□□□□ -1.74
TRIM25-203ENST00000570473 KRTAP13-2Q52LG2 175 aa4.15□□□□□ -1.75
TRIM25-203ENST00000570473 F8P00451 2351 aa4.15□□□□□ -1.75
TRIM25-203ENST00000570473 NBASA2RRP1 2371 aa4.14□□□□□ -1.75
TRIM25-203ENST00000570473 LCE4AQ5TA78 99 aa4.14□□□□□ -1.75
TRIM25-203ENST00000570473 KRTAP17-1Q9BYP8 105 aa4.14□□□□□ -1.75
TRIM25-203ENST00000570473 FBN1P35555 2871 aaKnown RBP4.14□□□□□ -1.75
TRIM25-203ENST00000570473 PRRC2CQ9Y520 2896 aaKnown RBP4.14□□□□□ -1.75
TRIM25-203ENST00000570473 DEFB135Q30KP9 77 aa4.13□□□□□ -1.75
TRIM25-203ENST00000570473 MAPK1IP1LQ8NDC0 245 aa4.13□□□□□ -1.75
TRIM25-203ENST00000570473 RIF1Q5UIP0 2472 aaKnown RBP4.13□□□□□ -1.75
TRIM25-203ENST00000570473 LAMA2P24043 3122 aaKnown RBP4.12□□□□□ -1.75
TRIM25-203ENST00000570473 KRTAP4-9Q9BYQ8 210 aa4.12□□□□□ -1.75
TRIM25-203ENST00000570473 DCHS1Q96JQ0 3298 aa4.12□□□□□ -1.75
TRIM25-203ENST00000570473 NAV2Q8IVL1 2488 aa4.12□□□□□ -1.75
TRIM25-203ENST00000570473 JMJD1CQ15652 2540 aa4.12□□□□□ -1.75
TRIM25-203ENST00000570473 KRTAP9-7A8MTY7 169 aa4.11□□□□□ -1.75
TRIM25-203ENST00000570473 KRTAP4-2Q9BYR5 136 aa4.11□□□□□ -1.75
TRIM25-203ENST00000570473 BAHCC1Q9P281 2608 aa4.1□□□□□ -1.75
TRIM25-203ENST00000570473 SPEGQ15772 3267 aa4.1□□□□□ -1.75
TRIM25-203ENST00000570473 MUC6Q6W4X9 2439 aa4.1□□□□□ -1.75
TRIM25-203ENST00000570473 CCDC168Q8NDH2 2452 aa4.1□□□□□ -1.75
TRIM25-203ENST00000570473 COL12A1Q99715 3063 aa4.09□□□□□ -1.75
TRIM25-203ENST00000570473 SRRM2Q9UQ35 2752 aaKnown RBP4.08□□□□□ -1.76
TRIM25-203ENST00000570473 RPS29P62273 56 aaKnown RBP4.07□□□□□ -1.76
TRIM25-203ENST00000570473 ZFHX4Q86UP3 3567 aa4.06□□□□□ -1.76
TRIM25-203ENST00000570473 COL6A5A8TX70 2615 aa4.06□□□□□ -1.76
TRIM25-203ENST00000570473 DEFB4AO15263 64 aa4.06□□□□□ -1.76
TRIM25-203ENST00000570473 CELSR1Q9NYQ6 3014 aa4.06□□□□□ -1.76
TRIM25-203ENST00000570473 NF1P21359 2839 aa4.06□□□□□ -1.76
TRIM25-203ENST00000570473 HIVEP3Q5T1R4 2406 aa4.05□□□□□ -1.76
TRIM25-203ENST00000570473 NBPF19A0A087WUL8 3843 aa4.05□□□□□ -1.76
TRIM25-203ENST00000570473 DMXL1Q9Y485 3027 aa4.05□□□□□ -1.76
TRIM25-203ENST00000570473 VPS13DQ5THJ4 4388 aa4.05□□□□□ -1.76
TRIM25-203ENST00000570473 DNAH14Q0VDD8 3507 aa4.04□□□□□ -1.76
TRIM25-203ENST00000570473 C5orf42Q9H799 3197 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms