RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 DNAL4O96015 105 aa8.58□□□□□ -1.04
COMMD4-225ENST00000569245 A0A087X002 238 aa8.56□□□□□ -1.04
COMMD4-225ENST00000569245 OCIAD2Q56VL3 154 aa8.56□□□□□ -1.04
COMMD4-225ENST00000569245 Q6ZQY7 126 aa8.56□□□□□ -1.04
COMMD4-225ENST00000569245 TYMSOSQ8TAI1 123 aa8.56□□□□□ -1.04
COMMD4-225ENST00000569245 IGLV5-48A0A075B6I7 105 aa8.54□□□□□ -1.04
COMMD4-225ENST00000569245 H3BQ85 93 aa8.54□□□□□ -1.04
COMMD4-225ENST00000569245 GHRHP01286 108 aa8.54□□□□□ -1.04
COMMD4-225ENST00000569245 UBE2V1Q13404 147 aa8.54□□□□□ -1.04
COMMD4-225ENST00000569245 ORMDL1Q9P0S3 153 aa8.54□□□□□ -1.04
COMMD4-225ENST00000569245 C9JAW5 83 aa8.53□□□□□ -1.04
COMMD4-225ENST00000569245 LINC01547P58512 204 aaPredicted RBP8.53□□□□□ -1.04
COMMD4-225ENST00000569245 FAM229BQ4G0N7 80 aa8.53□□□□□ -1.04
COMMD4-225ENST00000569245 ST20-AS1Q8NBB2 130 aa8.53□□□□□ -1.04
COMMD4-225ENST00000569245 PPDPFLQ8WWR9 84 aa8.52□□□□□ -1.05
COMMD4-225ENST00000569245 PRO0461Q9UI25 63 aa8.52□□□□□ -1.05
COMMD4-225ENST00000569245 BAALC-AS2P0C853 105 aa8.51□□□□□ -1.05
COMMD4-225ENST00000569245 SPRR4Q96PI1 79 aa8.51□□□□□ -1.05
COMMD4-225ENST00000569245 ZNF706Q9Y5V0 76 aaPredicted RBP8.51□□□□□ -1.05
COMMD4-225ENST00000569245 TEX49A0A1B0GTD5 131 aa8.5□□□□□ -1.05
COMMD4-225ENST00000569245 H3BT86 120 aa8.5□□□□□ -1.05
COMMD4-225ENST00000569245 TMEM256-PLSCR3K7ERE1 68 aa8.5□□□□□ -1.05
COMMD4-225ENST00000569245 SPRR1BP22528 89 aa8.5□□□□□ -1.05
COMMD4-225ENST00000569245 PRR4Q16378 134 aa8.5□□□□□ -1.05
COMMD4-225ENST00000569245 Q8N377 158 aa8.5□□□□□ -1.05
COMMD4-225ENST00000569245 F8W1H4 67 aa8.49□□□□□ -1.05
COMMD4-225ENST00000569245 KRTAP13-2Q52LG2 175 aa8.49□□□□□ -1.05
COMMD4-225ENST00000569245 RNF213Q63HN8 5207 aa8.48□□□□□ -1.05
COMMD4-225ENST00000569245 LINC00483Q53H64 154 aa8.48□□□□□ -1.05
COMMD4-225ENST00000569245 MTURNQ8N3F0 131 aa8.48□□□□□ -1.05
COMMD4-225ENST00000569245 DEFB105AQ8NG35 78 aa8.48□□□□□ -1.05
COMMD4-225ENST00000569245 SMCPP49901 116 aaPredicted RBP8.47□□□□□ -1.05
COMMD4-225ENST00000569245 GAGE2AQ6NT46 116 aa8.47□□□□□ -1.05
COMMD4-225ENST00000569245 ANKRD29Q8N6D5 301 aa8.47□□□□□ -1.05
COMMD4-225ENST00000569245 SMIM29Q86T20 159 aa8.45□□□□□ -1.06
COMMD4-225ENST00000569245 LINC00304Q8N9R0 145 aa8.45□□□□□ -1.06
COMMD4-225ENST00000569245 LPAP08519 4548 aa8.44□□□□□ -1.06
COMMD4-225ENST00000569245 C3orf22Q8N5N4 141 aa8.43□□□□□ -1.06
COMMD4-225ENST00000569245 NDUFV3P56181 108 aaKnown RBP8.42□□□□□ -1.06
COMMD4-225ENST00000569245 LAMTOR3Q9UHA4 124 aa8.42□□□□□ -1.06
COMMD4-225ENST00000569245 JMJD7-PLA2G4BH0Y9G9 81 aa8.39□□□□□ -1.07
COMMD4-225ENST00000569245 OBSCN-AS1Q96MR7 158 aa8.39□□□□□ -1.07
COMMD4-225ENST00000569245 C4orf48Q5BLP8 95 aa8.38□□□□□ -1.07
COMMD4-225ENST00000569245 IGLV8-61A0A075B6I0 122 aa8.37□□□□□ -1.07
COMMD4-225ENST00000569245 F8WEM9 126 aa8.37□□□□□ -1.07
COMMD4-225ENST00000569245 TEN1Q86WV5 123 aa8.37□□□□□ -1.07
COMMD4-225ENST00000569245 RETNLBQ9BQ08 111 aa8.37□□□□□ -1.07
COMMD4-225ENST00000569245 RBM3P98179 157 aaKnown RBP8.36□□□□□ -1.07
COMMD4-225ENST00000569245 ETDBQ3ZM63 59 aa8.36□□□□□ -1.07
COMMD4-225ENST00000569245 SPAG11AQ6PDA7 123 aa8.36□□□□□ -1.07
COMMD4-225ENST00000569245 Q8NBF4 154 aa8.34□□□□□ -1.07
COMMD4-225ENST00000569245 IGLV9-49A0A0B4J1Y8 123 aa8.33□□□□□ -1.08
COMMD4-225ENST00000569245 TRBV7-4A0A0J9YYF1 115 aa8.32□□□□□ -1.08
COMMD4-225ENST00000569245 A0A1B0GV72 72 aa8.32□□□□□ -1.08
COMMD4-225ENST00000569245 C9orf153Q5TBE3 101 aa8.32□□□□□ -1.08
COMMD4-225ENST00000569245 Q6JHZ5 121 aa8.32□□□□□ -1.08
COMMD4-225ENST00000569245 LOC110117498A0A087WWA1 95 aa8.31□□□□□ -1.08
COMMD4-225ENST00000569245 MOBPQ13875 183 aa8.31□□□□□ -1.08
COMMD4-225ENST00000569245 SSBP3-AS1Q7Z2R9 100 aa8.31□□□□□ -1.08
COMMD4-225ENST00000569245 DSCR8Q96T75 97 aa8.31□□□□□ -1.08
COMMD4-225ENST00000569245 C14orf132Q9NPU4 83 aa8.3□□□□□ -1.08
COMMD4-225ENST00000569245 IGLV7-46A0A075B6I9 117 aa8.29□□□□□ -1.08
COMMD4-225ENST00000569245 PDE6GP18545 87 aa8.29□□□□□ -1.08
COMMD4-225ENST00000569245 IGFL1Q6UW32 110 aa8.29□□□□□ -1.08
COMMD4-225ENST00000569245 C21orf62-AS1Q17RA5 79 aa8.28□□□□□ -1.08
COMMD4-225ENST00000569245 SPINK1P00995 79 aa8.27□□□□□ -1.09
COMMD4-225ENST00000569245 Q6ZQT0 140 aa8.27□□□□□ -1.09
COMMD4-225ENST00000569245 CDIP1Q9H305 208 aa8.25□□□□□ -1.09
COMMD4-225ENST00000569245 A0A0G2JQZ4 141 aa8.24□□□□□ -1.09
COMMD4-225ENST00000569245 A0A1W2PNM2 257 aa8.24□□□□□ -1.09
COMMD4-225ENST00000569245 CCKP06307 115 aa8.24□□□□□ -1.09
COMMD4-225ENST00000569245 Q6Q795 121 aa8.24□□□□□ -1.09
COMMD4-225ENST00000569245 CD164Q04900 197 aa8.22□□□□□ -1.09
COMMD4-225ENST00000569245 TPRXLQ17RH7 258 aa8.22□□□□□ -1.09
COMMD4-225ENST00000569245 A0A1B0GW54 56 aa8.21□□□□□ -1.1
COMMD4-225ENST00000569245 FP248Q71RG6 208 aaPredicted RBP8.21□□□□□ -1.1
COMMD4-225ENST00000569245 MUC2Q02817 5179 aa8.2□□□□□ -1.1
COMMD4-225ENST00000569245 VPS25Q9BRG1 176 aa8.2□□□□□ -1.1
COMMD4-225ENST00000569245 TRBV7-7A0A0K0K1E9 115 aa8.18□□□□□ -1.1
COMMD4-225ENST00000569245 RPS29P62273 56 aaKnown RBP8.18□□□□□ -1.1
COMMD4-225ENST00000569245 J3QR89 54 aa8.17□□□□□ -1.1
COMMD4-225ENST00000569245 HRCT1Q6UXD1 115 aa8.16□□□□□ -1.1
COMMD4-225ENST00000569245 FAM240AA0A1B0GVK7 77 aa8.15□□□□□ -1.1
COMMD4-225ENST00000569245 ACYP1P07311 99 aa8.15□□□□□ -1.1
COMMD4-225ENST00000569245 A0A087WSZ3 146 aa8.13□□□□□ -1.11
COMMD4-225ENST00000569245 Q5XG85 94 aa8.13□□□□□ -1.11
COMMD4-225ENST00000569245 K7ERU9 68 aa8.12□□□□□ -1.11
COMMD4-225ENST00000569245 KRTAP13-3Q3SY46 172 aa8.11□□□□□ -1.11
COMMD4-225ENST00000569245 LIMD2Q9BT23 127 aa8.11□□□□□ -1.11
COMMD4-225ENST00000569245 SS18L2Q9UHA2 77 aa8.11□□□□□ -1.11
COMMD4-225ENST00000569245 LINC00846Q9NV44 126 aa8.1□□□□□ -1.11
COMMD4-225ENST00000569245 A0A0U1RQV1 116 aa8.09□□□□□ -1.11
COMMD4-225ENST00000569245 ASB16-AS1Q495Z4 193 aa8.09□□□□□ -1.11
COMMD4-225ENST00000569245 MUC17Q685J3 4493 aa8.05□□□□□ -1.12
COMMD4-225ENST00000569245 NREPQ16612 68 aa8.05□□□□□ -1.12
COMMD4-225ENST00000569245 UBL5Q9BZL1 73 aa8.05□□□□□ -1.12
COMMD4-225ENST00000569245 Q6ZVQ6 151 aa8.04□□□□□ -1.12
COMMD4-225ENST00000569245 LINC00472Q9H8W2 130 aa8.04□□□□□ -1.12
COMMD4-225ENST00000569245 Q96NJ1 140 aa8.02□□□□□ -1.13
COMMD4-225ENST00000569245 SEC61BP60468 96 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms