RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 MACF1Q9UPN3 7388 aaKnown RBP6.02□□□□□ -1.44
GTF3C1-209ENST00000568569 S100A1P23297 94 aa6.02□□□□□ -1.45
GTF3C1-209ENST00000568569 KRTDAPP60985 99 aa6.02□□□□□ -1.45
GTF3C1-209ENST00000568569 TRBV20-1A0A075B6N2 111 aa6.01□□□□□ -1.45
GTF3C1-209ENST00000568569 LCE2BO14633 110 aa6.01□□□□□ -1.45
GTF3C1-209ENST00000568569 MT2AP02795 61 aa6.01□□□□□ -1.45
GTF3C1-209ENST00000568569 TTTY13Q9BZ97 58 aa6.01□□□□□ -1.45
GTF3C1-209ENST00000568569 SYNE2Q8WXH0 6885 aaKnown RBP6.01□□□□□ -1.45
GTF3C1-209ENST00000568569 F8WEM9 126 aa6□□□□□ -1.45
GTF3C1-209ENST00000568569 ATOH7Q8N100 152 aa6□□□□□ -1.45
GTF3C1-209ENST00000568569 A4D1N5 150 aa5.99□□□□□ -1.45
GTF3C1-209ENST00000568569 PET117Q6UWS5 81 aa5.99□□□□□ -1.45
GTF3C1-209ENST00000568569 NHP2Q9NX24 153 aaKnown RBP5.99□□□□□ -1.45
GTF3C1-209ENST00000568569 ZNF815PA8K554 130 aa5.98□□□□□ -1.45
GTF3C1-209ENST00000568569 HIST3H2BBQ8N257 126 aa5.98□□□□□ -1.45
GTF3C1-209ENST00000568569 TRBV7-7A0A0K0K1E9 115 aa5.97□□□□□ -1.45
GTF3C1-209ENST00000568569 MT1FP04733 61 aa5.97□□□□□ -1.45
GTF3C1-209ENST00000568569 ANKRD39Q53RE8 183 aa5.97□□□□□ -1.45
GTF3C1-209ENST00000568569 HIST1H2BLQ99880 126 aa5.97□□□□□ -1.45
GTF3C1-209ENST00000568569 A6NDN8 102 aa5.96□□□□□ -1.46
GTF3C1-209ENST00000568569 Q6JHZ5 121 aa5.96□□□□□ -1.46
GTF3C1-209ENST00000568569 CLEC2BQ92478 149 aa5.96□□□□□ -1.46
GTF3C1-209ENST00000568569 Q96NJ1 140 aa5.96□□□□□ -1.46
GTF3C1-209ENST00000568569 KRTAP9-3Q9BYQ3 159 aa5.96□□□□□ -1.46
GTF3C1-209ENST00000568569 C20orf166-AS1Q96NR2 134 aa5.95□□□□□ -1.46
GTF3C1-209ENST00000568569 KRTAP10-10P60014 251 aa5.94□□□□□ -1.46
GTF3C1-209ENST00000568569 IGFL1Q6UW32 110 aa5.94□□□□□ -1.46
GTF3C1-209ENST00000568569 COPS9Q8WXC6 57 aa5.94□□□□□ -1.46
GTF3C1-209ENST00000568569 LINC00846Q9NV44 126 aa5.94□□□□□ -1.46
GTF3C1-209ENST00000568569 TRAV13-2A0A0B4J235 113 aa5.92□□□□□ -1.46
GTF3C1-209ENST00000568569 FAM236DA0A1B0GTK5 79 aa5.92□□□□□ -1.46
GTF3C1-209ENST00000568569 FAM236CP0DP71 79 aa5.92□□□□□ -1.46
GTF3C1-209ENST00000568569 A8MUU9 505 aa5.91□□□□□ -1.46
GTF3C1-209ENST00000568569 LST1O00453 97 aa5.91□□□□□ -1.46
GTF3C1-209ENST00000568569 S100A2P29034 98 aa5.91□□□□□ -1.46
GTF3C1-209ENST00000568569 SNRPEP62304 92 aaKnown RBP5.91□□□□□ -1.46
GTF3C1-209ENST00000568569 SCGB1D4Q6XE38 83 aa5.91□□□□□ -1.46
GTF3C1-209ENST00000568569 IFITM1P13164 125 aa5.9□□□□□ -1.46
GTF3C1-209ENST00000568569 SMIM11BQ8TCY0 68 aa5.9□□□□□ -1.46
GTF3C1-209ENST00000568569 S100A6P06703 90 aa5.89□□□□□ -1.47
GTF3C1-209ENST00000568569 KRTAP19-6Q3LI70 58 aa5.88□□□□□ -1.47
GTF3C1-209ENST00000568569 OCIAD2Q56VL3 154 aa5.88□□□□□ -1.47
GTF3C1-209ENST00000568569 Q6ZQY7 126 aa5.88□□□□□ -1.47
GTF3C1-209ENST00000568569 Q6ZVH6 145 aa5.88□□□□□ -1.47
GTF3C1-209ENST00000568569 VAMP3Q15836 100 aa5.87□□□□□ -1.47
GTF3C1-209ENST00000568569 LINC00575Q6W349 94 aa5.87□□□□□ -1.47
GTF3C1-209ENST00000568569 hADV29S1A0JD25 119 aa5.85□□□□□ -1.47
GTF3C1-209ENST00000568569 MUSTN1Q8IVN3 82 aa5.85□□□□□ -1.47
GTF3C1-209ENST00000568569 RBM12B-AS1Q9P1G2 102 aa5.85□□□□□ -1.47
GTF3C1-209ENST00000568569 SS18L2Q9UHA2 77 aa5.85□□□□□ -1.47
GTF3C1-209ENST00000568569 SCGB1D1O95968 90 aa5.82□□□□□ -1.48
GTF3C1-209ENST00000568569 KRTAP6-3Q3LI67 103 aa5.82□□□□□ -1.48
GTF3C1-209ENST00000568569 MPLKIPQ8TAP9 179 aa5.82□□□□□ -1.48
GTF3C1-209ENST00000568569 PPDPFLQ8WWR9 84 aa5.82□□□□□ -1.48
GTF3C1-209ENST00000568569 H3BUT2 72 aa5.81□□□□□ -1.48
GTF3C1-209ENST00000568569 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.81□□□□□ -1.48
GTF3C1-209ENST00000568569 SNHG12Q9BXW3 62 aa5.81□□□□□ -1.48
GTF3C1-209ENST00000568569 TMEM238LA0A1B0GVL6 79 aa5.8□□□□□ -1.48
GTF3C1-209ENST00000568569 KRTAP16-1A8MUX0 517 aa5.8□□□□□ -1.48
GTF3C1-209ENST00000568569 HSBP1L1C9JCN9 74 aa5.8□□□□□ -1.48
GTF3C1-209ENST00000568569 HRES1P13985 223 aa5.8□□□□□ -1.48
GTF3C1-209ENST00000568569 DSCR10P59022 87 aa5.8□□□□□ -1.48
GTF3C1-209ENST00000568569 PAM16Q9Y3D7 125 aa5.78□□□□□ -1.48
GTF3C1-209ENST00000568569 TEN1Q86WV5 123 aa5.77□□□□□ -1.49
GTF3C1-209ENST00000568569 C12orf57Q99622 126 aa5.77□□□□□ -1.49
GTF3C1-209ENST00000568569 A0A087WSZ3 146 aa5.76□□□□□ -1.49
GTF3C1-209ENST00000568569 COX8AP10176 69 aa5.76□□□□□ -1.49
GTF3C1-209ENST00000568569 SPATA45Q537H7 98 aa5.76□□□□□ -1.49
GTF3C1-209ENST00000568569 SIGMAR1Q99720 223 aa5.75□□□□□ -1.49
GTF3C1-209ENST00000568569 LINC00313P59037 77 aa5.74□□□□□ -1.49
GTF3C1-209ENST00000568569 PYY3Q5JQD4 70 aa5.74□□□□□ -1.49
GTF3C1-209ENST00000568569 C2orf91Q6ZV80 131 aa5.74□□□□□ -1.49
GTF3C1-209ENST00000568569 NOTCH2NLQ7Z3S9 236 aa5.74□□□□□ -1.49
GTF3C1-209ENST00000568569 MTURNQ8N3F0 131 aa5.74□□□□□ -1.49
GTF3C1-209ENST00000568569 C14orf144Q96I85 54 aa5.74□□□□□ -1.49
GTF3C1-209ENST00000568569 VAMP8Q9BV40 100 aa5.74□□□□□ -1.49
GTF3C1-209ENST00000568569 C21orf62-AS1Q17RA5 79 aa5.73□□□□□ -1.49
GTF3C1-209ENST00000568569 BVES-AS1Q5T3Y7 98 aa5.73□□□□□ -1.49
GTF3C1-209ENST00000568569 HIST1H4GQ99525 98 aa5.71□□□□□ -1.5
GTF3C1-209ENST00000568569 A8MWP4 228 aa5.69□□□□□ -1.5
GTF3C1-209ENST00000568569 DLEU1O43261 78 aa5.69□□□□□ -1.5
GTF3C1-209ENST00000568569 NDUFV3P56181 108 aaKnown RBP5.69□□□□□ -1.5
GTF3C1-209ENST00000568569 NEBP20929 6669 aa5.67□□□□□ -1.5
GTF3C1-209ENST00000568569 IGKV4-1P06312 121 aa5.67□□□□□ -1.5
GTF3C1-209ENST00000568569 SNCGO76070 127 aa5.66□□□□□ -1.5
GTF3C1-209ENST00000568569 Q8N9P0 234 aaPredicted RBP5.66□□□□□ -1.5
GTF3C1-209ENST00000568569 HIGD1BQ9P298 99 aa5.66□□□□□ -1.5
GTF3C1-209ENST00000568569 H3BMG7 143 aa5.65□□□□□ -1.5
GTF3C1-209ENST00000568569 FXYD2P54710 66 aa5.65□□□□□ -1.5
GTF3C1-209ENST00000568569 A0A1W2PNM2 257 aa5.63□□□□□ -1.51
GTF3C1-209ENST00000568569 K7ERJ3 54 aa5.63□□□□□ -1.51
GTF3C1-209ENST00000568569 CEND1Q8N111 149 aa5.63□□□□□ -1.51
GTF3C1-209ENST00000568569 IGHV6-1A0A0B4J1U7 121 aa5.62□□□□□ -1.51
GTF3C1-209ENST00000568569 A0A0B4J2C4 111 aa5.62□□□□□ -1.51
GTF3C1-209ENST00000568569 GHRHP01286 108 aa5.61□□□□□ -1.51
GTF3C1-209ENST00000568569 SPINK7P58062 85 aa5.61□□□□□ -1.51
GTF3C1-209ENST00000568569 RAB37Q96AX2 223 aa5.61□□□□□ -1.51
GTF3C1-209ENST00000568569 FAM218AQ96MZ4 157 aa5.61□□□□□ -1.51
GTF3C1-209ENST00000568569 MUC12Q9UKN1 5478 aa5.61□□□□□ -1.51
GTF3C1-209ENST00000568569 H0YGX0 51 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms