RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 C3orf22Q8N5N4 141 aa9.78□□□□□ -0.84
CLN6-208ENST00000567060 Q8NBF4 154 aa9.78□□□□□ -0.84
CLN6-208ENST00000567060 DEFB105AQ8NG35 78 aa9.78□□□□□ -0.84
CLN6-208ENST00000567060 FAM218AQ96MZ4 157 aa9.78□□□□□ -0.84
CLN6-208ENST00000567060 MUC2Q02817 5179 aa9.78□□□□□ -0.84
CLN6-208ENST00000567060 SCGB1C2P0DMR2 95 aa9.77□□□□□ -0.85
CLN6-208ENST00000567060 BATFQ16520 125 aa9.77□□□□□ -0.85
CLN6-208ENST00000567060 Q8N377 158 aa9.77□□□□□ -0.85
CLN6-208ENST00000567060 IGLV9-49A0A0B4J1Y8 123 aa9.76□□□□□ -0.85
CLN6-208ENST00000567060 DNAL4O96015 105 aa9.76□□□□□ -0.85
CLN6-208ENST00000567060 LINC00304Q8N9R0 145 aa9.76□□□□□ -0.85
CLN6-208ENST00000567060 MOBPQ13875 183 aa9.75□□□□□ -0.85
CLN6-208ENST00000567060 TRACP01848 142 aa9.74□□□□□ -0.85
CLN6-208ENST00000567060 C9orf153Q5TBE3 101 aa9.74□□□□□ -0.85
CLN6-208ENST00000567060 SMIM29Q86T20 159 aa9.74□□□□□ -0.85
CLN6-208ENST00000567060 F8WEM9 126 aa9.73□□□□□ -0.85
CLN6-208ENST00000567060 C4orf48Q5BLP8 95 aa9.73□□□□□ -0.85
CLN6-208ENST00000567060 CLEC2BQ92478 149 aa9.73□□□□□ -0.85
CLN6-208ENST00000567060 LST1O00453 97 aa9.72□□□□□ -0.85
CLN6-208ENST00000567060 SPINK1P00995 79 aa9.71□□□□□ -0.86
CLN6-208ENST00000567060 RPS29P62273 56 aaKnown RBP9.71□□□□□ -0.86
CLN6-208ENST00000567060 SNHG12Q9BXW3 62 aa9.71□□□□□ -0.86
CLN6-208ENST00000567060 ORMDL1Q9P0S3 153 aa9.71□□□□□ -0.86
CLN6-208ENST00000567060 IGLV8-61A0A075B6I0 122 aa9.69□□□□□ -0.86
CLN6-208ENST00000567060 TRBV20-1A0A075B6N2 111 aa9.69□□□□□ -0.86
CLN6-208ENST00000567060 C9orf118A6NHY6 69 aa9.69□□□□□ -0.86
CLN6-208ENST00000567060 TMEM256-PLSCR3K7ERE1 68 aa9.68□□□□□ -0.86
CLN6-208ENST00000567060 CD164Q04900 197 aa9.68□□□□□ -0.86
CLN6-208ENST00000567060 ATXN8Q156A1 80 aa9.68□□□□□ -0.86
CLN6-208ENST00000567060 COL5A1-AS1Q5SY13 56 aa9.68□□□□□ -0.86
CLN6-208ENST00000567060 Q6JHZ5 121 aa9.68□□□□□ -0.86
CLN6-208ENST00000567060 H3BUT2 72 aa9.66□□□□□ -0.86
CLN6-208ENST00000567060 TAX1BP3O14907 124 aa9.66□□□□□ -0.86
CLN6-208ENST00000567060 NDUFV3P56181 108 aaKnown RBP9.64□□□□□ -0.87
CLN6-208ENST00000567060 KRTAP9-2Q9BYQ4 174 aa9.64□□□□□ -0.87
CLN6-208ENST00000567060 PCP4L1A6NKN8 68 aa9.63□□□□□ -0.87
CLN6-208ENST00000567060 TCL1BO95988 128 aa9.63□□□□□ -0.87
CLN6-208ENST00000567060 FABP2P12104 132 aa9.63□□□□□ -0.87
CLN6-208ENST00000567060 UBE2V1Q13404 147 aa9.63□□□□□ -0.87
CLN6-208ENST00000567060 NAA38Q9BRA0 125 aaKnown RBP9.63□□□□□ -0.87
CLN6-208ENST00000567060 A0A1W2PPM0 123 aa9.62□□□□□ -0.87
CLN6-208ENST00000567060 LIMD2Q9BT23 127 aa9.6□□□□□ -0.87
CLN6-208ENST00000567060 H3BMG7 143 aa9.58□□□□□ -0.88
CLN6-208ENST00000567060 Q5XG85 94 aa9.58□□□□□ -0.88
CLN6-208ENST00000567060 FAT4Q6V0I7 4981 aa9.57□□□□□ -0.88
CLN6-208ENST00000567060 BAALC-AS2P0C853 105 aa9.57□□□□□ -0.88
CLN6-208ENST00000567060 IGFL1Q6UW32 110 aa9.56□□□□□ -0.88
CLN6-208ENST00000567060 Q6Q795 121 aa9.55□□□□□ -0.88
CLN6-208ENST00000567060 FP248Q71RG6 208 aaPredicted RBP9.54□□□□□ -0.88
CLN6-208ENST00000567060 ANKRD29Q8N6D5 301 aa9.53□□□□□ -0.88
CLN6-208ENST00000567060 SPCS1Q9Y6A9 102 aa9.52□□□□□ -0.89
CLN6-208ENST00000567060 JMJD7-PLA2G4BH0Y9G9 81 aa9.51□□□□□ -0.89
CLN6-208ENST00000567060 H3BT86 120 aa9.51□□□□□ -0.89
CLN6-208ENST00000567060 TEN1Q86WV5 123 aa9.51□□□□□ -0.89
CLN6-208ENST00000567060 TRBV7-7A0A0K0K1E9 115 aa9.5□□□□□ -0.89
CLN6-208ENST00000567060 C9JAW5 83 aa9.5□□□□□ -0.89
CLN6-208ENST00000567060 HRCT1Q6UXD1 115 aa9.5□□□□□ -0.89
CLN6-208ENST00000567060 RBM3P98179 157 aaKnown RBP9.49□□□□□ -0.89
CLN6-208ENST00000567060 C21orf62-AS1Q17RA5 79 aa9.49□□□□□ -0.89
CLN6-208ENST00000567060 PRR4Q16378 134 aa9.47□□□□□ -0.89
CLN6-208ENST00000567060 ASB16-AS1Q495Z4 193 aa9.47□□□□□ -0.89
CLN6-208ENST00000567060 DSCR8Q96T75 97 aa9.47□□□□□ -0.89
CLN6-208ENST00000567060 A0A0G2JQZ4 141 aa9.46□□□□□ -0.9
CLN6-208ENST00000567060 TRBV7-4A0A0J9YYF1 115 aa9.46□□□□□ -0.9
CLN6-208ENST00000567060 KRTAP9-6A0A140TA67 174 aa9.46□□□□□ -0.9
CLN6-208ENST00000567060 SS18L2Q9UHA2 77 aa9.46□□□□□ -0.9
CLN6-208ENST00000567060 PDE6GP18545 87 aa9.45□□□□□ -0.9
CLN6-208ENST00000567060 LCE2AQ5TA79 106 aaPredicted RBP9.45□□□□□ -0.9
CLN6-208ENST00000567060 GTF2H5Q6ZYL4 71 aa9.45□□□□□ -0.9
CLN6-208ENST00000567060 K7EP34 96 aa9.44□□□□□ -0.9
CLN6-208ENST00000567060 RETNLBQ9BQ08 111 aa9.44□□□□□ -0.9
CLN6-208ENST00000567060 IGLV7-46A0A075B6I9 117 aa9.42□□□□□ -0.9
CLN6-208ENST00000567060 A0A1B0GW54 56 aa9.41□□□□□ -0.9
CLN6-208ENST00000567060 A0A1W2PNM2 257 aa9.41□□□□□ -0.9
CLN6-208ENST00000567060 OBSCN-AS1Q96MR7 158 aa9.41□□□□□ -0.9
CLN6-208ENST00000567060 LOC110117498A0A087WWA1 95 aa9.4□□□□□ -0.9
CLN6-208ENST00000567060 CCKP06307 115 aa9.4□□□□□ -0.9
CLN6-208ENST00000567060 TPRXLQ17RH7 258 aa9.4□□□□□ -0.9
CLN6-208ENST00000567060 A0A0U1RQV1 116 aa9.38□□□□□ -0.91
CLN6-208ENST00000567060 A0A087WSZ3 146 aa9.37□□□□□ -0.91
CLN6-208ENST00000567060 A0A1B0GV72 72 aa9.37□□□□□ -0.91
CLN6-208ENST00000567060 C1orf195Q5TG92 126 aa9.37□□□□□ -0.91
CLN6-208ENST00000567060 Q6ZQT0 140 aa9.35□□□□□ -0.91
CLN6-208ENST00000567060 MUC17Q685J3 4493 aa9.34□□□□□ -0.91
CLN6-208ENST00000567060 F8W1H4 67 aa9.33□□□□□ -0.92
CLN6-208ENST00000567060 MTURNQ8N3F0 131 aa9.33□□□□□ -0.92
CLN6-208ENST00000567060 PRO0461Q9UI25 63 aa9.33□□□□□ -0.92
CLN6-208ENST00000567060 C14orf132Q9NPU4 83 aa9.32□□□□□ -0.92
CLN6-208ENST00000567060 SMCPP49901 116 aaPredicted RBP9.31□□□□□ -0.92
CLN6-208ENST00000567060 VPS25Q9BRG1 176 aa9.31□□□□□ -0.92
CLN6-208ENST00000567060 KRTAP13-3Q3SY46 172 aa9.3□□□□□ -0.92
CLN6-208ENST00000567060 CDIP1Q9H305 208 aa9.27□□□□□ -0.93
CLN6-208ENST00000567060 Q96NJ1 140 aa9.24□□□□□ -0.93
CLN6-208ENST00000567060 LINC00472Q9H8W2 130 aa9.23□□□□□ -0.93
CLN6-208ENST00000567060 J3KT08 172 aa9.21□□□□□ -0.94
CLN6-208ENST00000567060 IGKV4-1P06312 121 aa9.18□□□□□ -0.94
CLN6-208ENST00000567060 FSIP2Q5CZC0 6907 aa9.17□□□□□ -0.94
CLN6-208ENST00000567060 ETDBQ3ZM63 59 aa9.16□□□□□ -0.94
CLN6-208ENST00000567060 XP32Q5T750 250 aa9.16□□□□□ -0.94
CLN6-208ENST00000567060 SIGMAR1Q99720 223 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms