RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 APOBP04114 4563 aaKnown RBP10.88□□□□□ -0.67
HERC2-208ENST00000566635 H0Y9J4 135 aa10.87□□□□□ -0.67
HERC2-208ENST00000566635 DEFB105AQ8NG35 78 aa10.87□□□□□ -0.67
HERC2-208ENST00000566635 LINC01547P58512 204 aaPredicted RBP10.86□□□□□ -0.67
HERC2-208ENST00000566635 C9orf153Q5TBE3 101 aa10.85□□□□□ -0.67
HERC2-208ENST00000566635 Q8N377 158 aa10.84□□□□□ -0.67
HERC2-208ENST00000566635 HIST1H4AP62805 103 aaKnown RBP10.83□□□□□ -0.68
HERC2-208ENST00000566635 IGLV5-48A0A075B6I7 105 aa10.82□□□□□ -0.68
HERC2-208ENST00000566635 COX7CP15954 63 aa10.81□□□□□ -0.68
HERC2-208ENST00000566635 LAMTOR3Q9UHA4 124 aa10.81□□□□□ -0.68
HERC2-208ENST00000566635 CRYGAP11844 174 aa10.81□□□□□ -0.68
HERC2-208ENST00000566635 OBSCN-AS1Q96MR7 158 aa10.81□□□□□ -0.68
HERC2-208ENST00000566635 H3BQ85 93 aa10.8□□□□□ -0.68
HERC2-208ENST00000566635 RPS28P62857 69 aaKnown RBP10.8□□□□□ -0.68
HERC2-208ENST00000566635 GHRHP01286 108 aa10.79□□□□□ -0.68
HERC2-208ENST00000566635 C14orf132Q9NPU4 83 aa10.79□□□□□ -0.68
HERC2-208ENST00000566635 IGLV7-43P04211 117 aa10.78□□□□□ -0.68
HERC2-208ENST00000566635 VPS13BQ7Z7G8 4022 aa10.78□□□□□ -0.68
HERC2-208ENST00000566635 J3KT08 172 aa10.78□□□□□ -0.68
HERC2-208ENST00000566635 ZNF861PO60384 105 aa10.78□□□□□ -0.68
HERC2-208ENST00000566635 ATOX1O00244 68 aa10.76□□□□□ -0.69
HERC2-208ENST00000566635 JMJD7-PLA2G4BH0Y9G9 81 aa10.75□□□□□ -0.69
HERC2-208ENST00000566635 GAGE2AQ6NT46 116 aa10.75□□□□□ -0.69
HERC2-208ENST00000566635 C5orf47Q569G3 176 aa10.73□□□□□ -0.69
HERC2-208ENST00000566635 SMIM29Q86T20 159 aa10.73□□□□□ -0.69
HERC2-208ENST00000566635 RBM3P98179 157 aaKnown RBP10.73□□□□□ -0.69
HERC2-208ENST00000566635 SMR3BP02814 79 aaPredicted RBP10.72□□□□□ -0.69
HERC2-208ENST00000566635 FAT1Q14517 4588 aa10.71□□□□□ -0.7
HERC2-208ENST00000566635 SPRR4Q96PI1 79 aa10.7□□□□□ -0.7
HERC2-208ENST00000566635 SPRR1BP22528 89 aa10.69□□□□□ -0.7
HERC2-208ENST00000566635 Q6JHZ5 121 aa10.69□□□□□ -0.7
HERC2-208ENST00000566635 DSCR8Q96T75 97 aa10.67□□□□□ -0.7
HERC2-208ENST00000566635 TRBV7-4A0A0J9YYF1 115 aa10.67□□□□□ -0.7
HERC2-208ENST00000566635 TMEM258P61165 79 aa10.67□□□□□ -0.7
HERC2-208ENST00000566635 RPL37AP61513 92 aaKnown RBP10.67□□□□□ -0.7
HERC2-208ENST00000566635 Q6ZQT0 140 aa10.66□□□□□ -0.7
HERC2-208ENST00000566635 ZNF706Q9Y5V0 76 aaPredicted RBP10.66□□□□□ -0.7
HERC2-208ENST00000566635 EPPK1P58107 5090 aaKnown RBP10.66□□□□□ -0.7
HERC2-208ENST00000566635 LOC110117498A0A087WWA1 95 aa10.66□□□□□ -0.7
HERC2-208ENST00000566635 SERP2Q8N6R1 65 aa10.65□□□□□ -0.7
HERC2-208ENST00000566635 F8WEM9 126 aa10.64□□□□□ -0.71
HERC2-208ENST00000566635 LINC00483Q53H64 154 aa10.64□□□□□ -0.71
HERC2-208ENST00000566635 ANAPC11Q9NYG5 84 aa10.64□□□□□ -0.71
HERC2-208ENST00000566635 CCKP06307 115 aa10.64□□□□□ -0.71
HERC2-208ENST00000566635 HSPG2P98160 4391 aa10.63□□□□□ -0.71
HERC2-208ENST00000566635 A0A0G2JQZ4 141 aa10.61□□□□□ -0.71
HERC2-208ENST00000566635 CYSTM1Q9H1C7 97 aa10.61□□□□□ -0.71
HERC2-208ENST00000566635 LINC00846Q9NV44 126 aa10.6□□□□□ -0.71
HERC2-208ENST00000566635 IGLV9-49A0A0B4J1Y8 123 aa10.58□□□□□ -0.72
HERC2-208ENST00000566635 PDE6GP18545 87 aa10.58□□□□□ -0.72
HERC2-208ENST00000566635 RYR1P21817 5038 aa10.58□□□□□ -0.72
HERC2-208ENST00000566635 IGLV8-61A0A075B6I0 122 aa10.58□□□□□ -0.72
HERC2-208ENST00000566635 KRTAP10-4P60372 401 aaPredicted RBP10.58□□□□□ -0.72
HERC2-208ENST00000566635 IGFL1Q6UW32 110 aa10.57□□□□□ -0.72
HERC2-208ENST00000566635 CDK2AP2O75956 126 aa10.56□□□□□ -0.72
HERC2-208ENST00000566635 IGKV3D-7A0A0C4DH55 119 aa10.55□□□□□ -0.72
HERC2-208ENST00000566635 A0A1W2PNM2 257 aa10.55□□□□□ -0.72
HERC2-208ENST00000566635 ATP5EP2Q5VTU8 51 aa10.54□□□□□ -0.72
HERC2-208ENST00000566635 MOBPQ13875 183 aa10.52□□□□□ -0.72
HERC2-208ENST00000566635 KRTAP1-4P0C5Y4 121 aa10.52□□□□□ -0.73
HERC2-208ENST00000566635 Q8NBF4 154 aa10.52□□□□□ -0.73
HERC2-208ENST00000566635 A0A087WVE0 104 aa10.51□□□□□ -0.73
HERC2-208ENST00000566635 OXTP01178 125 aa10.51□□□□□ -0.73
HERC2-208ENST00000566635 SPINK6Q6UWN8 80 aa10.51□□□□□ -0.73
HERC2-208ENST00000566635 KIAA1109Q2LD37 5005 aa10.51□□□□□ -0.73
HERC2-208ENST00000566635 A0A087X002 238 aa10.49□□□□□ -0.73
HERC2-208ENST00000566635 PKHD1L1Q86WI1 4243 aa10.48□□□□□ -0.73
HERC2-208ENST00000566635 Q5XG85 94 aa10.47□□□□□ -0.73
HERC2-208ENST00000566635 FAM229AH3BQW9 127 aa10.46□□□□□ -0.73
HERC2-208ENST00000566635 Q5VSD8 79 aa10.46□□□□□ -0.73
HERC2-208ENST00000566635 KRTAP17-1Q9BYP8 105 aa10.46□□□□□ -0.73
HERC2-208ENST00000566635 KRTAP13-2Q52LG2 175 aa10.45□□□□□ -0.74
HERC2-208ENST00000566635 PLA2G1BP04054 148 aaKnown RBP10.45□□□□□ -0.74
HERC2-208ENST00000566635 FAM229BQ4G0N7 80 aa10.45□□□□□ -0.74
HERC2-208ENST00000566635 HRCT1Q6UXD1 115 aa10.42□□□□□ -0.74
HERC2-208ENST00000566635 Q6ZVQ6 151 aa10.42□□□□□ -0.74
HERC2-208ENST00000566635 UBL5Q9BZL1 73 aa10.42□□□□□ -0.74
HERC2-208ENST00000566635 A0A087WSZ3 146 aa10.4□□□□□ -0.74
HERC2-208ENST00000566635 C4orf26Q17RF5 130 aa10.4□□□□□ -0.74
HERC2-208ENST00000566635 A0A1B0GW54 56 aa10.39□□□□□ -0.75
HERC2-208ENST00000566635 SSBP3-AS1Q7Z2R9 100 aa10.36□□□□□ -0.75
HERC2-208ENST00000566635 PRR26Q8N8Z3 221 aa10.36□□□□□ -0.75
HERC2-208ENST00000566635 NREPQ16612 68 aa10.35□□□□□ -0.75
HERC2-208ENST00000566635 TRAV7A0A075B6U4 112 aa10.34□□□□□ -0.75
HERC2-208ENST00000566635 FAM236DA0A1B0GTK5 79 aa10.34□□□□□ -0.75
HERC2-208ENST00000566635 FAM236CP0DP71 79 aa10.34□□□□□ -0.75
HERC2-208ENST00000566635 SERP1Q9Y6X1 66 aa10.34□□□□□ -0.75
HERC2-208ENST00000566635 Q8N1X5 172 aa10.33□□□□□ -0.76
HERC2-208ENST00000566635 H7BZZ5 65 aa10.33□□□□□ -0.76
HERC2-208ENST00000566635 C20orf197Q8N268 126 aa10.33□□□□□ -0.76
HERC2-208ENST00000566635 KLKP1Q107X0 134 aa10.32□□□□□ -0.76
HERC2-208ENST00000566635 TYMSOSQ8TAI1 123 aa10.32□□□□□ -0.76
HERC2-208ENST00000566635 LRP1Q07954 4544 aaKnown RBP10.29□□□□□ -0.76
HERC2-208ENST00000566635 CD164Q04900 197 aa10.27□□□□□ -0.77
HERC2-208ENST00000566635 BIRC6Q9NR09 4857 aa10.27□□□□□ -0.77
HERC2-208ENST00000566635 DEFB116Q30KQ4 102 aa10.27□□□□□ -0.77
HERC2-208ENST00000566635 FAT3Q8TDW7 4589 aa10.25□□□□□ -0.77
HERC2-208ENST00000566635 BPY2O14599 106 aa10.25□□□□□ -0.77
HERC2-208ENST00000566635 CXCL6P80162 114 aa10.25□□□□□ -0.77
HERC2-208ENST00000566635 PRO0628Q9UI54 55 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms