RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 PCP4L1A6NKN8 68 aa15.23■□□□□ 0.03
NME3-208ENST00000565379 LYRM7Q5U5X0 104 aa15.23■□□□□ 0.03
NME3-208ENST00000565379 CLEC2BQ92478 149 aa15.23■□□□□ 0.03
NME3-208ENST00000565379 DNAL4O96015 105 aa15.22■□□□□ 0.03
NME3-208ENST00000565379 Q8N377 158 aa15.22■□□□□ 0.03
NME3-208ENST00000565379 SSBP3-AS1Q7Z2R9 100 aa15.21■□□□□ 0.03
NME3-208ENST00000565379 C3orf22Q8N5N4 141 aa15.21■□□□□ 0.03
NME3-208ENST00000565379 IGLV9-49A0A0B4J1Y8 123 aa15.19■□□□□ 0.02
NME3-208ENST00000565379 H3BQ85 93 aa15.19■□□□□ 0.02
NME3-208ENST00000565379 C9orf118A6NHY6 69 aa15.18■□□□□ 0.02
NME3-208ENST00000565379 TRACP01848 142 aa15.18■□□□□ 0.02
NME3-208ENST00000565379 COL5A1-AS1Q5SY13 56 aa15.18■□□□□ 0.02
NME3-208ENST00000565379 LPAP08519 4548 aa15.18■□□□□ 0.02
NME3-208ENST00000565379 LST1O00453 97 aa15.17■□□□□ 0.02
NME3-208ENST00000565379 TAX1BP3O14907 124 aa15.17■□□□□ 0.02
NME3-208ENST00000565379 MOBPQ13875 183 aa15.16■□□□□ 0.02
NME3-208ENST00000565379 C9orf153Q5TBE3 101 aa15.16■□□□□ 0.02
NME3-208ENST00000565379 SMIM29Q86T20 159 aa15.16■□□□□ 0.02
NME3-208ENST00000565379 Q8NBF4 154 aa15.16■□□□□ 0.02
NME3-208ENST00000565379 NAA38Q9BRA0 125 aaKnown RBP15.15■□□□□ 0.02
NME3-208ENST00000565379 H3BUT2 72 aa15.14■□□□□ 0.01
NME3-208ENST00000565379 ATXN8Q156A1 80 aa15.13■□□□□ 0.01
NME3-208ENST00000565379 ORMDL1Q9P0S3 153 aa15.13■□□□□ 0.01
NME3-208ENST00000565379 TRBV20-1A0A075B6N2 111 aa15.12■□□□□ 0.01
NME3-208ENST00000565379 F8WEM9 126 aa15.12■□□□□ 0.01
NME3-208ENST00000565379 SPAG11AQ6PDA7 123 aa15.12■□□□□ 0.01
NME3-208ENST00000565379 LINC00304Q8N9R0 145 aa15.12■□□□□ 0.01
NME3-208ENST00000565379 C4orf48Q5BLP8 95 aa15.08■□□□□ 0
NME3-208ENST00000565379 A0A1W2PPM0 123 aa15.07■□□□□ 0
NME3-208ENST00000565379 TMEM256-PLSCR3K7ERE1 68 aa15.07■□□□□ 0
NME3-208ENST00000565379 TCL1BO95988 128 aa15.07■□□□□ 0
NME3-208ENST00000565379 FABP2P12104 132 aa15.06■□□□□ 0
NME3-208ENST00000565379 IGLV8-61A0A075B6I0 122 aa15.03■□□□□ -0
NME3-208ENST00000565379 NDUFV3P56181 108 aaKnown RBP15.02■□□□□ -0
NME3-208ENST00000565379 Q6JHZ5 121 aa15.02■□□□□ -0
NME3-208ENST00000565379 SPINK1P00995 79 aa15□□□□□ -0.01
NME3-208ENST00000565379 UBE2V1Q13404 147 aa14.99□□□□□ -0.01
NME3-208ENST00000565379 RPS29P62273 56 aaKnown RBP14.97□□□□□ -0.01
NME3-208ENST00000565379 CD164Q04900 197 aa14.97□□□□□ -0.01
NME3-208ENST00000565379 BAALC-AS2P0C853 105 aa14.95□□□□□ -0.02
NME3-208ENST00000565379 H3BMG7 143 aa14.93□□□□□ -0.02
NME3-208ENST00000565379 SPCS1Q9Y6A9 102 aa14.91□□□□□ -0.02
NME3-208ENST00000565379 IGFL1Q6UW32 110 aa14.88□□□□□ -0.03
NME3-208ENST00000565379 ANKRD29Q8N6D5 301 aa14.88□□□□□ -0.03
NME3-208ENST00000565379 C9JAW5 83 aa14.87□□□□□ -0.03
NME3-208ENST00000565379 PRR4Q16378 134 aa14.85□□□□□ -0.03
NME3-208ENST00000565379 LIMD2Q9BT23 127 aa14.85□□□□□ -0.03
NME3-208ENST00000565379 HRCT1Q6UXD1 115 aa14.83□□□□□ -0.04
NME3-208ENST00000565379 H3BT86 120 aa14.82□□□□□ -0.04
NME3-208ENST00000565379 A0A0G2JQZ4 141 aa14.8□□□□□ -0.04
NME3-208ENST00000565379 JMJD7-PLA2G4BH0Y9G9 81 aa14.8□□□□□ -0.04
NME3-208ENST00000565379 K7EP34 96 aa14.8□□□□□ -0.04
NME3-208ENST00000565379 RBM3P98179 157 aaKnown RBP14.8□□□□□ -0.04
NME3-208ENST00000565379 Q6Q795 121 aa14.8□□□□□ -0.04
NME3-208ENST00000565379 Q5XG85 94 aa14.79□□□□□ -0.04
NME3-208ENST00000565379 GTF2H5Q6ZYL4 71 aa14.79□□□□□ -0.04
NME3-208ENST00000565379 TEN1Q86WV5 123 aa14.77□□□□□ -0.05
NME3-208ENST00000565379 DSCR8Q96T75 97 aa14.76□□□□□ -0.05
NME3-208ENST00000565379 TRBV7-7A0A0K0K1E9 115 aa14.75□□□□□ -0.05
NME3-208ENST00000565379 TRBV7-4A0A0J9YYF1 115 aa14.72□□□□□ -0.05
NME3-208ENST00000565379 A0A1B0GV72 72 aa14.72□□□□□ -0.05
NME3-208ENST00000565379 FP248Q71RG6 208 aaPredicted RBP14.71□□□□□ -0.05
NME3-208ENST00000565379 PDE6GP18545 87 aa14.69□□□□□ -0.06
NME3-208ENST00000565379 RETNLBQ9BQ08 111 aa14.69□□□□□ -0.06
NME3-208ENST00000565379 C21orf62-AS1Q17RA5 79 aa14.68□□□□□ -0.06
NME3-208ENST00000565379 OBSCN-AS1Q96MR7 158 aa14.68□□□□□ -0.06
NME3-208ENST00000565379 MTURNQ8N3F0 131 aa14.67□□□□□ -0.06
NME3-208ENST00000565379 SS18L2Q9UHA2 77 aa14.67□□□□□ -0.06
NME3-208ENST00000565379 A0A1W2PNM2 257 aa14.66□□□□□ -0.06
NME3-208ENST00000565379 CCKP06307 115 aa14.66□□□□□ -0.06
NME3-208ENST00000565379 MUC2Q02817 5179 aa14.65□□□□□ -0.06
NME3-208ENST00000565379 ASB16-AS1Q495Z4 193 aa14.65□□□□□ -0.06
NME3-208ENST00000565379 LOC110117498A0A087WWA1 95 aa14.64□□□□□ -0.07
NME3-208ENST00000565379 PRO0461Q9UI25 63 aa14.63□□□□□ -0.07
NME3-208ENST00000565379 F8W1H4 67 aa14.6□□□□□ -0.07
NME3-208ENST00000565379 IGLV7-46A0A075B6I9 117 aa14.59□□□□□ -0.07
NME3-208ENST00000565379 A0A087WSZ3 146 aa14.59□□□□□ -0.07
NME3-208ENST00000565379 SMCPP49901 116 aaPredicted RBP14.59□□□□□ -0.07
NME3-208ENST00000565379 A0A1B0GW54 56 aa14.58□□□□□ -0.08
NME3-208ENST00000565379 Q6ZQT0 140 aa14.58□□□□□ -0.08
NME3-208ENST00000565379 C14orf132Q9NPU4 83 aa14.58□□□□□ -0.08
NME3-208ENST00000565379 A0A0U1RQV1 116 aa14.56□□□□□ -0.08
NME3-208ENST00000565379 C1orf195Q5TG92 126 aa14.56□□□□□ -0.08
NME3-208ENST00000565379 VPS25Q9BRG1 176 aa14.56□□□□□ -0.08
NME3-208ENST00000565379 TPRXLQ17RH7 258 aa14.49□□□□□ -0.09
NME3-208ENST00000565379 MUC17Q685J3 4493 aa14.49□□□□□ -0.09
NME3-208ENST00000565379 A0A1B0GV90 55 aa14.43□□□□□ -0.1
NME3-208ENST00000565379 FAT4Q6V0I7 4981 aa14.39□□□□□ -0.11
NME3-208ENST00000565379 KRTAP13-3Q3SY46 172 aa14.39□□□□□ -0.11
NME3-208ENST00000565379 ETDBQ3ZM63 59 aa14.37□□□□□ -0.11
NME3-208ENST00000565379 Q96NJ1 140 aa14.37□□□□□ -0.11
NME3-208ENST00000565379 LINC00472Q9H8W2 130 aa14.35□□□□□ -0.11
NME3-208ENST00000565379 CDIP1Q9H305 208 aa14.34□□□□□ -0.11
NME3-208ENST00000565379 KRTAP9-2Q9BYQ4 174 aa14.33□□□□□ -0.12
NME3-208ENST00000565379 LCE2AQ5TA79 106 aaPredicted RBP14.31□□□□□ -0.12
NME3-208ENST00000565379 J3KT08 172 aa14.3□□□□□ -0.12
NME3-208ENST00000565379 IGKV4-1P06312 121 aa14.29□□□□□ -0.12
NME3-208ENST00000565379 NREPQ16612 68 aa14.29□□□□□ -0.12
NME3-208ENST00000565379 SIGMAR1Q99720 223 aa14.27□□□□□ -0.13
NME3-208ENST00000565379 DEFB116Q30KQ4 102 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms