RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 CIRBP-AS1Q8TBR5 109 aa7.87□□□□□ -1.15
NSMCE1-208ENST00000565070 LRP1BQ9NZR2 4599 aa7.86□□□□□ -1.15
NSMCE1-208ENST00000565070 H0Y9J4 135 aa7.85□□□□□ -1.15
NSMCE1-208ENST00000565070 FAM19A1Q7Z5A9 133 aa7.85□□□□□ -1.15
NSMCE1-208ENST00000565070 UBL5Q9BZL1 73 aa7.85□□□□□ -1.15
NSMCE1-208ENST00000565070 CDK2AP2O75956 126 aa7.85□□□□□ -1.15
NSMCE1-208ENST00000565070 ATP5EP2Q5VTU8 51 aa7.85□□□□□ -1.15
NSMCE1-208ENST00000565070 DYNC1H1Q14204 4646 aaKnown RBP7.84□□□□□ -1.15
NSMCE1-208ENST00000565070 PRLHP81277 87 aa7.84□□□□□ -1.15
NSMCE1-208ENST00000565070 IGKV3D-7A0A0C4DH55 119 aa7.83□□□□□ -1.16
NSMCE1-208ENST00000565070 CCDC179H3BU77 68 aa7.83□□□□□ -1.16
NSMCE1-208ENST00000565070 C3orf22Q8N5N4 141 aa7.83□□□□□ -1.16
NSMCE1-208ENST00000565070 SMIM29Q86T20 159 aa7.81□□□□□ -1.16
NSMCE1-208ENST00000565070 HAMPP81172 84 aa7.8□□□□□ -1.16
NSMCE1-208ENST00000565070 Q6ZVQ6 151 aa7.8□□□□□ -1.16
NSMCE1-208ENST00000565070 FAM236AA0A1B0GUQ0 79 aa7.79□□□□□ -1.16
NSMCE1-208ENST00000565070 FAM236BA0A1B0GV22 79 aa7.79□□□□□ -1.16
NSMCE1-208ENST00000565070 HIGD2AQ9BW72 106 aa7.79□□□□□ -1.16
NSMCE1-208ENST00000565070 BCE1O60756 84 aa7.79□□□□□ -1.16
NSMCE1-208ENST00000565070 HIST1H4AP62805 103 aaKnown RBP7.78□□□□□ -1.16
NSMCE1-208ENST00000565070 KRTAP13-1Q8IUC0 172 aa7.78□□□□□ -1.16
NSMCE1-208ENST00000565070 A0A1B0GW54 56 aa7.77□□□□□ -1.17
NSMCE1-208ENST00000565070 C1orf137Q5JT78 98 aa7.77□□□□□ -1.17
NSMCE1-208ENST00000565070 SRRM2Q9UQ35 2752 aaKnown RBP7.77□□□□□ -1.17
NSMCE1-208ENST00000565070 SPRR1BP22528 89 aa7.76□□□□□ -1.17
NSMCE1-208ENST00000565070 UBE2AP49459 152 aa7.76□□□□□ -1.17
NSMCE1-208ENST00000565070 CXCL6P80162 114 aa7.76□□□□□ -1.17
NSMCE1-208ENST00000565070 SS18L2Q9UHA2 77 aa7.76□□□□□ -1.17
NSMCE1-208ENST00000565070 APOBP04114 4563 aaKnown RBP7.76□□□□□ -1.17
NSMCE1-208ENST00000565070 A0A1W2PNM2 257 aa7.75□□□□□ -1.17
NSMCE1-208ENST00000565070 IGLV8-61A0A075B6I0 122 aa7.75□□□□□ -1.17
NSMCE1-208ENST00000565070 Q8NBF4 154 aa7.75□□□□□ -1.17
NSMCE1-208ENST00000565070 A0A087WVE0 104 aa7.74□□□□□ -1.17
NSMCE1-208ENST00000565070 F8WEM9 126 aa7.74□□□□□ -1.17
NSMCE1-208ENST00000565070 SPRR4Q96PI1 79 aa7.74□□□□□ -1.17
NSMCE1-208ENST00000565070 PSORS1C2Q9UIG4 136 aa7.73□□□□□ -1.17
NSMCE1-208ENST00000565070 EPPK1P58107 5090 aaKnown RBP7.72□□□□□ -1.17
NSMCE1-208ENST00000565070 FAM229AH3BQW9 127 aa7.72□□□□□ -1.17
NSMCE1-208ENST00000565070 SMR3BP02814 79 aaPredicted RBP7.72□□□□□ -1.17
NSMCE1-208ENST00000565070 RPL37AP61513 92 aaKnown RBP7.71□□□□□ -1.18
NSMCE1-208ENST00000565070 UQCRQO14949 82 aa7.7□□□□□ -1.18
NSMCE1-208ENST00000565070 NREPQ16612 68 aa7.7□□□□□ -1.18
NSMCE1-208ENST00000565070 ATOX1O00244 68 aa7.7□□□□□ -1.18
NSMCE1-208ENST00000565070 PLA2G1BP04054 148 aaKnown RBP7.7□□□□□ -1.18
NSMCE1-208ENST00000565070 CRYGAP11844 174 aa7.7□□□□□ -1.18
NSMCE1-208ENST00000565070 IGFL1Q6UW32 110 aa7.7□□□□□ -1.18
NSMCE1-208ENST00000565070 COX7CP15954 63 aa7.68□□□□□ -1.18
NSMCE1-208ENST00000565070 IGLV7-43P04211 117 aa7.67□□□□□ -1.18
NSMCE1-208ENST00000565070 VPS13BQ7Z7G8 4022 aa7.67□□□□□ -1.18
NSMCE1-208ENST00000565070 C9orf153Q5TBE3 101 aa7.66□□□□□ -1.18
NSMCE1-208ENST00000565070 Q8N1X5 172 aa7.66□□□□□ -1.18
NSMCE1-208ENST00000565070 LINC00483Q53H64 154 aa7.65□□□□□ -1.18
NSMCE1-208ENST00000565070 Q5VSD8 79 aa7.65□□□□□ -1.18
NSMCE1-208ENST00000565070 A0A0G2JQZ4 141 aa7.64□□□□□ -1.19
NSMCE1-208ENST00000565070 ZNF861PO60384 105 aa7.64□□□□□ -1.19
NSMCE1-208ENST00000565070 FAT1Q14517 4588 aa7.64□□□□□ -1.19
NSMCE1-208ENST00000565070 BPY2O14599 106 aa7.64□□□□□ -1.19
NSMCE1-208ENST00000565070 ZNF706Q9Y5V0 76 aaPredicted RBP7.63□□□□□ -1.19
NSMCE1-208ENST00000565070 SERP2Q8N6R1 65 aa7.62□□□□□ -1.19
NSMCE1-208ENST00000565070 RYR1P21817 5038 aa7.62□□□□□ -1.19
NSMCE1-208ENST00000565070 BIRC6Q9NR09 4857 aa7.62□□□□□ -1.19
NSMCE1-208ENST00000565070 IGKV4-1P06312 121 aa7.61□□□□□ -1.19
NSMCE1-208ENST00000565070 KRTAP10-4P60372 401 aaPredicted RBP7.61□□□□□ -1.19
NSMCE1-208ENST00000565070 SPINK6Q6UWN8 80 aa7.6□□□□□ -1.19
NSMCE1-208ENST00000565070 KIAA1109Q2LD37 5005 aa7.59□□□□□ -1.19
NSMCE1-208ENST00000565070 A0A087WSZ3 146 aa7.59□□□□□ -1.19
NSMCE1-208ENST00000565070 Q8N9L7 120 aa7.59□□□□□ -1.19
NSMCE1-208ENST00000565070 HSPG2P98160 4391 aa7.58□□□□□ -1.2
NSMCE1-208ENST00000565070 DSCR10P59022 87 aa7.56□□□□□ -1.2
NSMCE1-208ENST00000565070 SMIM20Q8N5G0 67 aa7.56□□□□□ -1.2
NSMCE1-208ENST00000565070 IGLV9-49A0A0B4J1Y8 123 aa7.55□□□□□ -1.2
NSMCE1-208ENST00000565070 KRTAP17-1Q9BYP8 105 aa7.53□□□□□ -1.2
NSMCE1-208ENST00000565070 TRAV7A0A075B6U4 112 aa7.53□□□□□ -1.2
NSMCE1-208ENST00000565070 K7EQZ3 153 aa7.51□□□□□ -1.21
NSMCE1-208ENST00000565070 LINC00472Q9H8W2 130 aa7.51□□□□□ -1.21
NSMCE1-208ENST00000565070 ANAPC11Q9NYG5 84 aa7.51□□□□□ -1.21
NSMCE1-208ENST00000565070 MOBPQ13875 183 aa7.5□□□□□ -1.21
NSMCE1-208ENST00000565070 CYSTM1Q9H1C7 97 aa7.49□□□□□ -1.21
NSMCE1-208ENST00000565070 DEFB116Q30KQ4 102 aa7.49□□□□□ -1.21
NSMCE1-208ENST00000565070 TMEM258P61165 79 aa7.48□□□□□ -1.21
NSMCE1-208ENST00000565070 RPS28P62857 69 aaKnown RBP7.47□□□□□ -1.21
NSMCE1-208ENST00000565070 FAM229BQ4G0N7 80 aa7.47□□□□□ -1.21
NSMCE1-208ENST00000565070 PKHD1L1Q86WI1 4243 aa7.47□□□□□ -1.21
NSMCE1-208ENST00000565070 KRTAP1-4P0C5Y4 121 aa7.46□□□□□ -1.22
NSMCE1-208ENST00000565070 OCR1Q9BZK8 76 aa7.46□□□□□ -1.22
NSMCE1-208ENST00000565070 KRTAP4-5Q9BYR2 181 aa7.45□□□□□ -1.22
NSMCE1-208ENST00000565070 J3KT08 172 aa7.45□□□□□ -1.22
NSMCE1-208ENST00000565070 A8MWP4 228 aa7.44□□□□□ -1.22
NSMCE1-208ENST00000565070 HCG22E2RYF7 251 aa7.44□□□□□ -1.22
NSMCE1-208ENST00000565070 Q96NJ1 140 aa7.44□□□□□ -1.22
NSMCE1-208ENST00000565070 HERC2O95714 4834 aa7.43□□□□□ -1.22
NSMCE1-208ENST00000565070 HRCT1Q6UXD1 115 aa7.43□□□□□ -1.22
NSMCE1-208ENST00000565070 PRR15Q8IV56 129 aa7.43□□□□□ -1.22
NSMCE1-208ENST00000565070 C20orf197Q8N268 126 aa7.43□□□□□ -1.22
NSMCE1-208ENST00000565070 SSBP3-AS1Q7Z2R9 100 aa7.42□□□□□ -1.22
NSMCE1-208ENST00000565070 OXTP01178 125 aa7.41□□□□□ -1.22
NSMCE1-208ENST00000565070 CD164Q04900 197 aa7.41□□□□□ -1.22
NSMCE1-208ENST00000565070 KLKP1Q107X0 134 aa7.41□□□□□ -1.22
NSMCE1-208ENST00000565070 A0A087X002 238 aa7.38□□□□□ -1.23
NSMCE1-208ENST00000565070 KRTAP29-1A8MX34 341 aaPredicted RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms