RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 LINC00575Q6W349 94 aa9.03□□□□□ -0.96
RNF40-205ENST00000563909 H0YGX0 51 aa9.02□□□□□ -0.97
RNF40-205ENST00000563909 MT1HP80294 61 aa9.02□□□□□ -0.97
RNF40-205ENST00000563909 ST20-AS1Q8NBB2 130 aa9.02□□□□□ -0.97
RNF40-205ENST00000563909 hADV29S1A0JD25 119 aa9.01□□□□□ -0.97
RNF40-205ENST00000563909 SNCGO76070 127 aa9□□□□□ -0.97
RNF40-205ENST00000563909 LORP23490 312 aaPredicted RBP9□□□□□ -0.97
RNF40-205ENST00000563909 KRTAP13-3Q3SY46 172 aa9□□□□□ -0.97
RNF40-205ENST00000563909 PSMB2P49721 201 aa8.99□□□□□ -0.97
RNF40-205ENST00000563909 TRIAP1O43715 76 aa8.98□□□□□ -0.97
RNF40-205ENST00000563909 COX6CP09669 75 aa8.98□□□□□ -0.97
RNF40-205ENST00000563909 SPRR1BP22528 89 aa8.98□□□□□ -0.97
RNF40-205ENST00000563909 TEX49A0A1B0GTD5 131 aa8.97□□□□□ -0.97
RNF40-205ENST00000563909 KRTAP10-6P60371 365 aaPredicted RBP8.97□□□□□ -0.97
RNF40-205ENST00000563909 FP248Q71RG6 208 aaPredicted RBP8.97□□□□□ -0.97
RNF40-205ENST00000563909 DEFB105AQ8NG35 78 aa8.97□□□□□ -0.97
RNF40-205ENST00000563909 C3orf22Q8N5N4 141 aa8.96□□□□□ -0.98
RNF40-205ENST00000563909 IGLV5-48A0A075B6I7 105 aa8.95□□□□□ -0.98
RNF40-205ENST00000563909 A0A1B0GX51 115 aa8.95□□□□□ -0.98
RNF40-205ENST00000563909 KRTAP19-2Q3LHN2 52 aa8.95□□□□□ -0.98
RNF40-205ENST00000563909 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.95□□□□□ -0.98
RNF40-205ENST00000563909 BATFQ16520 125 aa8.94□□□□□ -0.98
RNF40-205ENST00000563909 Q6ZQY7 126 aa8.94□□□□□ -0.98
RNF40-205ENST00000563909 LAMTOR3Q9UHA4 124 aa8.94□□□□□ -0.98
RNF40-205ENST00000563909 IGLV9-49A0A0B4J1Y8 123 aa8.92□□□□□ -0.98
RNF40-205ENST00000563909 SSBP3-AS1Q7Z2R9 100 aa8.92□□□□□ -0.98
RNF40-205ENST00000563909 FAM218AQ96MZ4 157 aa8.92□□□□□ -0.98
RNF40-205ENST00000563909 SCGB1C2P0DMR2 95 aa8.91□□□□□ -0.98
RNF40-205ENST00000563909 OCIAD2Q56VL3 154 aa8.91□□□□□ -0.98
RNF40-205ENST00000563909 Q8N377 158 aa8.91□□□□□ -0.98
RNF40-205ENST00000563909 MOBPQ13875 183 aa8.9□□□□□ -0.98
RNF40-205ENST00000563909 C9orf153Q5TBE3 101 aa8.9□□□□□ -0.98
RNF40-205ENST00000563909 SPAG11AQ6PDA7 123 aa8.9□□□□□ -0.98
RNF40-205ENST00000563909 PPDPFLQ8WWR9 84 aa8.9□□□□□ -0.98
RNF40-205ENST00000563909 CLEC2BQ92478 149 aa8.9□□□□□ -0.98
RNF40-205ENST00000563909 GHRHP01286 108 aa8.89□□□□□ -0.99
RNF40-205ENST00000563909 SMIM29Q86T20 159 aa8.88□□□□□ -0.99
RNF40-205ENST00000563909 Q8NBF4 154 aa8.88□□□□□ -0.99
RNF40-205ENST00000563909 SSPOA2VEC9 5147 aa8.88□□□□□ -0.99
RNF40-205ENST00000563909 DNAL4O96015 105 aa8.87□□□□□ -0.99
RNF40-205ENST00000563909 C4orf48Q5BLP8 95 aa8.86□□□□□ -0.99
RNF40-205ENST00000563909 USH2AO75445 5202 aa8.86□□□□□ -0.99
RNF40-205ENST00000563909 F8WEM9 126 aa8.85□□□□□ -0.99
RNF40-205ENST00000563909 SNHG12Q9BXW3 62 aa8.85□□□□□ -0.99
RNF40-205ENST00000563909 M0R2T5 61 aa8.84□□□□□ -0.99
RNF40-205ENST00000563909 LYRM7Q5U5X0 104 aa8.84□□□□□ -0.99
RNF40-205ENST00000563909 NAA38Q9BRA0 125 aaKnown RBP8.84□□□□□ -0.99
RNF40-205ENST00000563909 PCP4L1A6NKN8 68 aa8.83□□□□□ -1
RNF40-205ENST00000563909 H3BQ85 93 aa8.83□□□□□ -1
RNF40-205ENST00000563909 LST1O00453 97 aa8.83□□□□□ -1
RNF40-205ENST00000563909 TRACP01848 142 aa8.83□□□□□ -1
RNF40-205ENST00000563909 ORMDL1Q9P0S3 153 aa8.82□□□□□ -1
RNF40-205ENST00000563909 C9orf118A6NHY6 69 aa8.81□□□□□ -1
RNF40-205ENST00000563909 H3BUT2 72 aa8.81□□□□□ -1
RNF40-205ENST00000563909 TAX1BP3O14907 124 aa8.81□□□□□ -1
RNF40-205ENST00000563909 SPINK1P00995 79 aa8.8□□□□□ -1
RNF40-205ENST00000563909 ATXN8Q156A1 80 aa8.8□□□□□ -1
RNF40-205ENST00000563909 XP32Q5T750 250 aa8.8□□□□□ -1
RNF40-205ENST00000563909 FABP2P12104 132 aa8.79□□□□□ -1
RNF40-205ENST00000563909 COL5A1-AS1Q5SY13 56 aa8.79□□□□□ -1
RNF40-205ENST00000563909 FCGBPQ9Y6R7 5405 aaPredicted RBP8.78□□□□□ -1
RNF40-205ENST00000563909 TRBV20-1A0A075B6N2 111 aa8.78□□□□□ -1
RNF40-205ENST00000563909 TMEM256-PLSCR3K7ERE1 68 aa8.78□□□□□ -1
RNF40-205ENST00000563909 TCL1BO95988 128 aa8.78□□□□□ -1
RNF40-205ENST00000563909 IGLV8-61A0A075B6I0 122 aa8.77□□□□□ -1.01
RNF40-205ENST00000563909 NDUFV3P56181 108 aaKnown RBP8.77□□□□□ -1.01
RNF40-205ENST00000563909 Q6JHZ5 121 aa8.77□□□□□ -1.01
RNF40-205ENST00000563909 RPS29P62273 56 aaKnown RBP8.76□□□□□ -1.01
RNF40-205ENST00000563909 CD164Q04900 197 aa8.75□□□□□ -1.01
RNF40-205ENST00000563909 A0A1W2PPM0 123 aa8.74□□□□□ -1.01
RNF40-205ENST00000563909 UBE2V1Q13404 147 aa8.73□□□□□ -1.01
RNF40-205ENST00000563909 HRCT1Q6UXD1 115 aa8.73□□□□□ -1.01
RNF40-205ENST00000563909 H3BMG7 143 aa8.72□□□□□ -1.01
RNF40-205ENST00000563909 BAALC-AS2P0C853 105 aa8.72□□□□□ -1.01
RNF40-205ENST00000563909 SYNE2Q8WXH0 6885 aaKnown RBP8.71□□□□□ -1.01
RNF40-205ENST00000563909 IGFL1Q6UW32 110 aa8.71□□□□□ -1.02
RNF40-205ENST00000563909 A0A0G2JQZ4 141 aa8.7□□□□□ -1.02
RNF40-205ENST00000563909 PCOTHQ58A44 107 aa8.7□□□□□ -1.02
RNF40-205ENST00000563909 LIMD2Q9BT23 127 aa8.7□□□□□ -1.02
RNF40-205ENST00000563909 FLGP20930 4061 aaPredicted RBP8.69□□□□□ -1.02
RNF40-205ENST00000563909 ANKRD29Q8N6D5 301 aa8.67□□□□□ -1.02
RNF40-205ENST00000563909 C9JAW5 83 aa8.66□□□□□ -1.02
RNF40-205ENST00000563909 SPCS1Q9Y6A9 102 aa8.66□□□□□ -1.02
RNF40-205ENST00000563909 Q5XG85 94 aa8.65□□□□□ -1.02
RNF40-205ENST00000563909 Q6Q795 121 aa8.64□□□□□ -1.03
RNF40-205ENST00000563909 MACF1Q9UPN3 7388 aaKnown RBP8.63□□□□□ -1.03
RNF40-205ENST00000563909 TRBV7-7A0A0K0K1E9 115 aa8.63□□□□□ -1.03
RNF40-205ENST00000563909 A0A1B0GV72 72 aa8.63□□□□□ -1.03
RNF40-205ENST00000563909 RBM3P98179 157 aaKnown RBP8.63□□□□□ -1.03
RNF40-205ENST00000563909 COX6B2Q6YFQ2 88 aa8.63□□□□□ -1.03
RNF40-205ENST00000563909 TEN1Q86WV5 123 aa8.63□□□□□ -1.03
RNF40-205ENST00000563909 JMJD7-PLA2G4BH0Y9G9 81 aa8.61□□□□□ -1.03
RNF40-205ENST00000563909 H3BT86 120 aa8.61□□□□□ -1.03
RNF40-205ENST00000563909 DSCR8Q96T75 97 aa8.61□□□□□ -1.03
RNF40-205ENST00000563909 TRBV7-4A0A0J9YYF1 115 aa8.58□□□□□ -1.04
RNF40-205ENST00000563909 A0A1W2PNM2 257 aa8.58□□□□□ -1.04
RNF40-205ENST00000563909 K7EP34 96 aa8.58□□□□□ -1.04
RNF40-205ENST00000563909 CCKP06307 115 aa8.56□□□□□ -1.04
RNF40-205ENST00000563909 GTF2H5Q6ZYL4 71 aa8.56□□□□□ -1.04
RNF40-205ENST00000563909 MTURNQ8N3F0 131 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 2447.7 ms