RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 TRBV7-6A0A0J9YX20 115 aa9.87□□□□□ -0.83
NME3-204ENST00000563498 UQCR10Q9UDW1 63 aa9.86□□□□□ -0.83
NME3-204ENST00000563498 IGLV5-48A0A075B6I7 105 aa9.85□□□□□ -0.83
NME3-204ENST00000563498 HSBP1L1C9JCN9 74 aa9.85□□□□□ -0.83
NME3-204ENST00000563498 PET117Q6UWS5 81 aa9.83□□□□□ -0.84
NME3-204ENST00000563498 TMEM238LA0A1B0GVL6 79 aa9.82□□□□□ -0.84
NME3-204ENST00000563498 A0A1B0GWB2 263 aa9.82□□□□□ -0.84
NME3-204ENST00000563498 A0A0G2JQZ4 141 aa9.81□□□□□ -0.84
NME3-204ENST00000563498 TCL1BO95988 128 aa9.81□□□□□ -0.84
NME3-204ENST00000563498 ZNF815PA8K554 130 aa9.8□□□□□ -0.84
NME3-204ENST00000563498 SYS1-DBNDD2H3BUS1 97 aa9.8□□□□□ -0.84
NME3-204ENST00000563498 BATFQ16520 125 aa9.77□□□□□ -0.85
NME3-204ENST00000563498 PAM16Q9Y3D7 125 aa9.77□□□□□ -0.85
NME3-204ENST00000563498 A4D1N5 150 aa9.76□□□□□ -0.85
NME3-204ENST00000563498 SPATA45Q537H7 98 aa9.76□□□□□ -0.85
NME3-204ENST00000563498 LINC01545Q5VT33 79 aa9.75□□□□□ -0.85
NME3-204ENST00000563498 TTTY13Q9BZ97 58 aa9.75□□□□□ -0.85
NME3-204ENST00000563498 K7ERU9 68 aa9.74□□□□□ -0.85
NME3-204ENST00000563498 COPS9Q8WXC6 57 aa9.74□□□□□ -0.85
NME3-204ENST00000563498 NHP2Q9NX24 153 aaKnown RBP9.74□□□□□ -0.85
NME3-204ENST00000563498 A6NDN8 102 aa9.72□□□□□ -0.85
NME3-204ENST00000563498 KRTAP9-7A8MTY7 169 aa9.72□□□□□ -0.85
NME3-204ENST00000563498 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.72□□□□□ -0.85
NME3-204ENST00000563498 VPS25Q9BRG1 176 aa9.72□□□□□ -0.85
NME3-204ENST00000563498 OCIAD2Q56VL3 154 aa9.71□□□□□ -0.86
NME3-204ENST00000563498 IFITM1P13164 125 aa9.7□□□□□ -0.86
NME3-204ENST00000563498 Q6Q795 121 aa9.7□□□□□ -0.86
NME3-204ENST00000563498 ATP11AUNQ6ZP68 121 aa9.7□□□□□ -0.86
NME3-204ENST00000563498 CFC1P0CG37 223 aa9.69□□□□□ -0.86
NME3-204ENST00000563498 SCGB1D4Q6XE38 83 aa9.69□□□□□ -0.86
NME3-204ENST00000563498 Q75L30 129 aa9.69□□□□□ -0.86
NME3-204ENST00000563498 F8WEM9 126 aa9.68□□□□□ -0.86
NME3-204ENST00000563498 Q6ZVH6 145 aa9.68□□□□□ -0.86
NME3-204ENST00000563498 SCGB1A1P11684 91 aa9.67□□□□□ -0.86
NME3-204ENST00000563498 KRTDAPP60985 99 aa9.67□□□□□ -0.86
NME3-204ENST00000563498 PCP2Q8IVA1 136 aa9.67□□□□□ -0.86
NME3-204ENST00000563498 VAMP3Q15836 100 aa9.66□□□□□ -0.86
NME3-204ENST00000563498 USH2AO75445 5202 aa9.65□□□□□ -0.86
NME3-204ENST00000563498 C3orf79P0CE67 100 aa9.65□□□□□ -0.86
NME3-204ENST00000563498 Q6JHZ5 121 aa9.65□□□□□ -0.86
NME3-204ENST00000563498 OBSCN-AS1Q96MR7 158 aa9.65□□□□□ -0.86
NME3-204ENST00000563498 SSPOA2VEC9 5147 aa9.64□□□□□ -0.87
NME3-204ENST00000563498 TRBV7-7A0A0K0K1E9 115 aa9.64□□□□□ -0.87
NME3-204ENST00000563498 SMIM11BQ8TCY0 68 aa9.64□□□□□ -0.87
NME3-204ENST00000563498 TRAV13-2A0A0B4J235 113 aa9.63□□□□□ -0.87
NME3-204ENST00000563498 MUSTN1Q8IVN3 82 aa9.63□□□□□ -0.87
NME3-204ENST00000563498 CLEC2BQ92478 149 aa9.63□□□□□ -0.87
NME3-204ENST00000563498 KRTAP9-8Q9BYQ0 159 aa9.63□□□□□ -0.87
NME3-204ENST00000563498 TAX1BP3O14907 124 aa9.62□□□□□ -0.87
NME3-204ENST00000563498 IGFL1Q6UW32 110 aa9.6□□□□□ -0.87
NME3-204ENST00000563498 LINC00575Q6W349 94 aa9.58□□□□□ -0.88
NME3-204ENST00000563498 GTF2H5Q6ZYL4 71 aa9.58□□□□□ -0.88
NME3-204ENST00000563498 BVES-AS1Q5T3Y7 98 aa9.57□□□□□ -0.88
NME3-204ENST00000563498 Q6ZQY7 126 aa9.57□□□□□ -0.88
NME3-204ENST00000563498 hADV29S1A0JD25 119 aa9.54□□□□□ -0.88
NME3-204ENST00000563498 Q96NJ1 140 aa9.53□□□□□ -0.88
NME3-204ENST00000563498 LST1O00453 97 aa9.52□□□□□ -0.89
NME3-204ENST00000563498 A0A1B0GV72 72 aa9.51□□□□□ -0.89
NME3-204ENST00000563498 C20orf166-AS1Q96NR2 134 aa9.51□□□□□ -0.89
NME3-204ENST00000563498 TRBV20-1A0A075B6N2 111 aa9.5□□□□□ -0.89
NME3-204ENST00000563498 PPDPFLQ8WWR9 84 aa9.5□□□□□ -0.89
NME3-204ENST00000563498 C9orf118A6NHY6 69 aa9.49□□□□□ -0.89
NME3-204ENST00000563498 FCGBPQ9Y6R7 5405 aaPredicted RBP9.49□□□□□ -0.89
NME3-204ENST00000563498 A8MUU9 505 aa9.48□□□□□ -0.89
NME3-204ENST00000563498 K7EP34 96 aa9.48□□□□□ -0.89
NME3-204ENST00000563498 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.48□□□□□ -0.89
NME3-204ENST00000563498 MTURNQ8N3F0 131 aa9.48□□□□□ -0.89
NME3-204ENST00000563498 ATOH7Q8N100 152 aa9.47□□□□□ -0.89
NME3-204ENST00000563498 COX8AP10176 69 aa9.46□□□□□ -0.9
NME3-204ENST00000563498 SS18L2Q9UHA2 77 aa9.46□□□□□ -0.9
NME3-204ENST00000563498 SIGMAR1Q99720 223 aa9.45□□□□□ -0.9
NME3-204ENST00000563498 MT2AP02795 61 aa9.44□□□□□ -0.9
NME3-204ENST00000563498 A6NJY4 79 aa9.43□□□□□ -0.9
NME3-204ENST00000563498 J3QR89 54 aa9.43□□□□□ -0.9
NME3-204ENST00000563498 H3BUT2 72 aa9.42□□□□□ -0.9
NME3-204ENST00000563498 HSD52Q0P140 79 aa9.4□□□□□ -0.9
NME3-204ENST00000563498 C2orf91Q6ZV80 131 aa9.39□□□□□ -0.91
NME3-204ENST00000563498 KRTAP19-1Q8IUB9 90 aa9.39□□□□□ -0.91
NME3-204ENST00000563498 LCE2BO14633 110 aa9.37□□□□□ -0.91
NME3-204ENST00000563498 TEN1Q86WV5 123 aa9.37□□□□□ -0.91
NME3-204ENST00000563498 A0A1W2PPM0 123 aa9.36□□□□□ -0.91
NME3-204ENST00000563498 MT1FP04733 61 aa9.36□□□□□ -0.91
NME3-204ENST00000563498 FABP2P12104 132 aa9.36□□□□□ -0.91
NME3-204ENST00000563498 SPCS1Q9Y6A9 102 aa9.35□□□□□ -0.91
NME3-204ENST00000563498 HIGD1BQ9P298 99 aa9.34□□□□□ -0.91
NME3-204ENST00000563498 FAM236DA0A1B0GTK5 79 aa9.33□□□□□ -0.92
NME3-204ENST00000563498 F8W1H4 67 aa9.33□□□□□ -0.92
NME3-204ENST00000563498 FAM236CP0DP71 79 aa9.33□□□□□ -0.92
NME3-204ENST00000563498 KRTAP9-3Q9BYQ3 159 aa9.33□□□□□ -0.92
NME3-204ENST00000563498 A0A087WSZ3 146 aa9.32□□□□□ -0.92
NME3-204ENST00000563498 DSCR10P59022 87 aa9.32□□□□□ -0.92
NME3-204ENST00000563498 KRTAP16-1A8MUX0 517 aa9.3□□□□□ -0.92
NME3-204ENST00000563498 MPLKIPQ8TAP9 179 aa9.3□□□□□ -0.92
NME3-204ENST00000563498 KRTAP10-10P60014 251 aa9.29□□□□□ -0.92
NME3-204ENST00000563498 NDUFV3P56181 108 aaKnown RBP9.28□□□□□ -0.92
NME3-204ENST00000563498 RBM12B-AS1Q9P1G2 102 aa9.28□□□□□ -0.92
NME3-204ENST00000563498 SNCGO76070 127 aa9.27□□□□□ -0.93
NME3-204ENST00000563498 HRES1P13985 223 aa9.26□□□□□ -0.93
NME3-204ENST00000563498 SYNE2Q8WXH0 6885 aaKnown RBP9.25□□□□□ -0.93
NME3-204ENST00000563498 LINC00313P59037 77 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms