RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 A0A1B0GVY2 172 aa7.55□□□□□ -1.2
HERC1-214ENST00000561400 KRTAP10-2P60368 255 aa7.55□□□□□ -1.2
HERC1-214ENST00000561400 TOMM7Q9P0U1 55 aa7.55□□□□□ -1.2
HERC1-214ENST00000561400 NREPQ16612 68 aa7.54□□□□□ -1.2
HERC1-214ENST00000561400 NCR3O14931 201 aa7.53□□□□□ -1.2
HERC1-214ENST00000561400 Q8IZM0 81 aa7.53□□□□□ -1.2
HERC1-214ENST00000561400 C1orf64Q8NEQ6 169 aa7.53□□□□□ -1.2
HERC1-214ENST00000561400 PKHD1P08F94 4074 aa7.53□□□□□ -1.2
HERC1-214ENST00000561400 DNAH5Q8TE73 4624 aa7.52□□□□□ -1.2
HERC1-214ENST00000561400 COX7B2Q8TF08 81 aa7.52□□□□□ -1.2
HERC1-214ENST00000561400 CNBPP62633 177 aaKnown RBP7.51□□□□□ -1.21
HERC1-214ENST00000561400 C10orf25Q5T742 122 aa7.51□□□□□ -1.21
HERC1-214ENST00000561400 H0Y9J4 135 aa7.51□□□□□ -1.21
HERC1-214ENST00000561400 UNQ6190/PRO20217Q6UXQ8 127 aa7.51□□□□□ -1.21
HERC1-214ENST00000561400 CAMK2N2Q96S95 79 aa7.51□□□□□ -1.21
HERC1-214ENST00000561400 CHKB-CPT1BH3BT56 60 aa7.5□□□□□ -1.21
HERC1-214ENST00000561400 MIR7-3HGQ8N6C7 128 aa7.5□□□□□ -1.21
HERC1-214ENST00000561400 IGLV5-52A0A0A0MRZ9 124 aa7.5□□□□□ -1.21
HERC1-214ENST00000561400 LINC00308Q8TCZ7 52 aa7.5□□□□□ -1.21
HERC1-214ENST00000561400 CYP4F30PQ9H0H9 118 aa7.49□□□□□ -1.21
HERC1-214ENST00000561400 JMJD7-PLA2G4BH0Y9G9 81 aa7.48□□□□□ -1.21
HERC1-214ENST00000561400 NDUFA1O15239 70 aa7.48□□□□□ -1.21
HERC1-214ENST00000561400 LINC01547P58512 204 aaPredicted RBP7.48□□□□□ -1.21
HERC1-214ENST00000561400 C9orf163Q8N9P6 203 aa7.48□□□□□ -1.21
HERC1-214ENST00000561400 C6orf48Q9UBA6 75 aa7.47□□□□□ -1.21
HERC1-214ENST00000561400 A0A087WYN8 130 aa7.47□□□□□ -1.21
HERC1-214ENST00000561400 C9orf116Q5BN46 136 aaPredicted RBP7.47□□□□□ -1.21
HERC1-214ENST00000561400 ORMDL1Q9P0S3 153 aa7.46□□□□□ -1.22
HERC1-214ENST00000561400 EPPK1P58107 5090 aaKnown RBP7.46□□□□□ -1.22
HERC1-214ENST00000561400 H0YGX0 51 aa7.45□□□□□ -1.22
HERC1-214ENST00000561400 LIMD2Q9BT23 127 aa7.44□□□□□ -1.22
HERC1-214ENST00000561400 CDC42SE1Q9NRR8 79 aa7.44□□□□□ -1.22
HERC1-214ENST00000561400 DYNC1H1Q14204 4646 aaKnown RBP7.44□□□□□ -1.22
HERC1-214ENST00000561400 LRP1BQ9NZR2 4599 aa7.43□□□□□ -1.22
HERC1-214ENST00000561400 BPY2O14599 106 aa7.43□□□□□ -1.22
HERC1-214ENST00000561400 KRTAP10-1P60331 282 aa7.43□□□□□ -1.22
HERC1-214ENST00000561400 Q75L30 129 aa7.42□□□□□ -1.22
HERC1-214ENST00000561400 PANO1I0J062 215 aa7.41□□□□□ -1.22
HERC1-214ENST00000561400 MOBPQ13875 183 aa7.41□□□□□ -1.22
HERC1-214ENST00000561400 ZNF706Q9Y5V0 76 aaPredicted RBP7.41□□□□□ -1.22
HERC1-214ENST00000561400 A0A096LNI7 61 aa7.4□□□□□ -1.22
HERC1-214ENST00000561400 TLX1NBP0CAT3 122 aa7.4□□□□□ -1.22
HERC1-214ENST00000561400 CHTF8P0CG12 524 aa7.4□□□□□ -1.22
HERC1-214ENST00000561400 OCR1Q9BZK8 76 aa7.4□□□□□ -1.22
HERC1-214ENST00000561400 FAM30AQ9NZY2 134 aa7.4□□□□□ -1.22
HERC1-214ENST00000561400 C6orf99Q4VX62 202 aa7.4□□□□□ -1.23
HERC1-214ENST00000561400 HIGD2AQ9BW72 106 aa7.4□□□□□ -1.23
HERC1-214ENST00000561400 DNAH8Q96JB1 4490 aa7.4□□□□□ -1.23
HERC1-214ENST00000561400 IGKV2-24A0A0C4DH68 120 aa7.39□□□□□ -1.23
HERC1-214ENST00000561400 HAMPP81172 84 aa7.39□□□□□ -1.23
HERC1-214ENST00000561400 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.39□□□□□ -1.23
HERC1-214ENST00000561400 A6NED7 52 aa7.38□□□□□ -1.23
HERC1-214ENST00000561400 COX17Q14061 63 aa7.38□□□□□ -1.23
HERC1-214ENST00000561400 Q6ZSA8 131 aa7.38□□□□□ -1.23
HERC1-214ENST00000561400 LINC00158P58513 81 aa7.37□□□□□ -1.23
HERC1-214ENST00000561400 Q8N9P0 234 aaPredicted RBP7.36□□□□□ -1.23
HERC1-214ENST00000561400 XAGE1AQ9HD64 81 aa7.36□□□□□ -1.23
HERC1-214ENST00000561400 SPACA4Q8TDM5 124 aa7.36□□□□□ -1.23
HERC1-214ENST00000561400 LINC00167Q96N53 147 aa7.36□□□□□ -1.23
HERC1-214ENST00000561400 PRR3P79522 188 aaKnown RBP7.35□□□□□ -1.23
HERC1-214ENST00000561400 PRAC1Q96KF2 57 aa7.35□□□□□ -1.23
HERC1-214ENST00000561400 PRR15LQ9BU68 103 aa7.35□□□□□ -1.23
HERC1-214ENST00000561400 SMIM11BQ8TCY0 68 aa7.35□□□□□ -1.23
HERC1-214ENST00000561400 SND1-IT1Q9HBX3 110 aa7.35□□□□□ -1.23
HERC1-214ENST00000561400 APOBP04114 4563 aaKnown RBP7.34□□□□□ -1.23
HERC1-214ENST00000561400 LOC101927531A0A1B0GV80 90 aa7.33□□□□□ -1.24
HERC1-214ENST00000561400 FAM168BA1KXE4 195 aa7.33□□□□□ -1.24
HERC1-214ENST00000561400 A0A1W2PNN7 141 aa7.33□□□□□ -1.24
HERC1-214ENST00000561400 Q6ZQT0 140 aa7.33□□□□□ -1.24
HERC1-214ENST00000561400 LOC110117498A0A087WWA1 95 aa7.32□□□□□ -1.24
HERC1-214ENST00000561400 KRTAP7-1Q8IUC3 87 aa7.32□□□□□ -1.24
HERC1-214ENST00000561400 CIRBP-AS1Q8TBR5 109 aa7.32□□□□□ -1.24
HERC1-214ENST00000561400 SCXQ7RTU7 201 aa7.32□□□□□ -1.24
HERC1-214ENST00000561400 PLA2G1BP04054 148 aaKnown RBP7.31□□□□□ -1.24
HERC1-214ENST00000561400 IGHV6-1A0A0B4J1U7 121 aa7.31□□□□□ -1.24
HERC1-214ENST00000561400 Q8NDZ9 215 aa7.31□□□□□ -1.24
HERC1-214ENST00000561400 PLAC8Q9NZF1 115 aa7.31□□□□□ -1.24
HERC1-214ENST00000561400 ASB16-AS1Q495Z4 193 aa7.29□□□□□ -1.24
HERC1-214ENST00000561400 ZCCHC13Q8WW36 166 aaKnown RBP7.29□□□□□ -1.24
HERC1-214ENST00000561400 KIAA1109Q2LD37 5005 aa7.29□□□□□ -1.24
HERC1-214ENST00000561400 IGKV2-28A0A075B6P5 120 aa7.28□□□□□ -1.24
HERC1-214ENST00000561400 IGKV2D-28P01615 120 aa7.28□□□□□ -1.24
HERC1-214ENST00000561400 PLA2G2DQ9UNK4 145 aa7.28□□□□□ -1.24
HERC1-214ENST00000561400 CDK2AP2O75956 126 aa7.27□□□□□ -1.25
HERC1-214ENST00000561400 RETNLBQ9BQ08 111 aa7.27□□□□□ -1.25
HERC1-214ENST00000561400 BIRC6Q9NR09 4857 aa7.26□□□□□ -1.25
HERC1-214ENST00000561400 HSPG2P98160 4391 aa7.26□□□□□ -1.25
HERC1-214ENST00000561400 ELOF1P60002 83 aaKnown RBP7.25□□□□□ -1.25
HERC1-214ENST00000561400 RYR1P21817 5038 aa7.25□□□□□ -1.25
HERC1-214ENST00000561400 A0A087X002 238 aa7.25□□□□□ -1.25
HERC1-214ENST00000561400 CASC2Q6XLA1 102 aa7.25□□□□□ -1.25
HERC1-214ENST00000561400 IGLV5-37A0A075B6J1 123 aa7.24□□□□□ -1.25
HERC1-214ENST00000561400 PDE6GP18545 87 aa7.24□□□□□ -1.25
HERC1-214ENST00000561400 SMR3BP02814 79 aaPredicted RBP7.24□□□□□ -1.25
HERC1-214ENST00000561400 ADM2Q7Z4H4 148 aa7.23□□□□□ -1.25
HERC1-214ENST00000561400 KRTAP11-1Q8IUC1 163 aa7.23□□□□□ -1.25
HERC1-214ENST00000561400 FAT1Q14517 4588 aa7.22□□□□□ -1.25
HERC1-214ENST00000561400 C7orf33Q8WU49 177 aa7.22□□□□□ -1.25
HERC1-214ENST00000561400 Q9BRP9 147 aa7.21□□□□□ -1.25
HERC1-214ENST00000561400 KRTAP17-1Q9BYP8 105 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms