RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 A6NDN8 102 aa9.37□□□□□ -0.91
TSPAN3-208ENST00000560514 MUSTN1Q8IVN3 82 aa9.37□□□□□ -0.91
TSPAN3-208ENST00000560514 TRAV13-2A0A0B4J235 113 aa9.36□□□□□ -0.91
TSPAN3-208ENST00000560514 C1orf195Q5TG92 126 aa9.36□□□□□ -0.91
TSPAN3-208ENST00000560514 SMIM29Q86T20 159 aa9.36□□□□□ -0.91
TSPAN3-208ENST00000560514 USH2AO75445 5202 aa9.35□□□□□ -0.91
TSPAN3-208ENST00000560514 Q1RN00 199 aa9.35□□□□□ -0.91
TSPAN3-208ENST00000560514 NHP2Q9NX24 153 aaKnown RBP9.35□□□□□ -0.91
TSPAN3-208ENST00000560514 PCP2Q8IVA1 136 aa9.33□□□□□ -0.92
TSPAN3-208ENST00000560514 ATOH7Q8N100 152 aa9.31□□□□□ -0.92
TSPAN3-208ENST00000560514 VAMP3Q15836 100 aa9.3□□□□□ -0.92
TSPAN3-208ENST00000560514 SMIM11BQ8TCY0 68 aa9.29□□□□□ -0.92
TSPAN3-208ENST00000560514 ATP11AUNQ6ZP68 121 aa9.27□□□□□ -0.93
TSPAN3-208ENST00000560514 KRTAP9-8Q9BYQ0 159 aa9.26□□□□□ -0.93
TSPAN3-208ENST00000560514 FCGBPQ9Y6R7 5405 aaPredicted RBP9.25□□□□□ -0.93
TSPAN3-208ENST00000560514 TCL1BO95988 128 aa9.25□□□□□ -0.93
TSPAN3-208ENST00000560514 HSBP1L1C9JCN9 74 aa9.24□□□□□ -0.93
TSPAN3-208ENST00000560514 LINC00575Q6W349 94 aa9.23□□□□□ -0.93
TSPAN3-208ENST00000560514 HIST3H2BBQ8N257 126 aa9.22□□□□□ -0.93
TSPAN3-208ENST00000560514 S100A2P29034 98 aa9.21□□□□□ -0.94
TSPAN3-208ENST00000560514 HIST1H2BLQ99880 126 aa9.21□□□□□ -0.94
TSPAN3-208ENST00000560514 MACF1Q9UPN3 7388 aaKnown RBP9.21□□□□□ -0.94
TSPAN3-208ENST00000560514 SYNE2Q8WXH0 6885 aaKnown RBP9.2□□□□□ -0.94
TSPAN3-208ENST00000560514 F8WEM9 126 aa9.2□□□□□ -0.94
TSPAN3-208ENST00000560514 Q6JHZ5 121 aa9.2□□□□□ -0.94
TSPAN3-208ENST00000560514 KRTAP19-1Q8IUB9 90 aa9.2□□□□□ -0.94
TSPAN3-208ENST00000560514 A0A0G2JQZ4 141 aa9.19□□□□□ -0.94
TSPAN3-208ENST00000560514 hADV29S1A0JD25 119 aa9.19□□□□□ -0.94
TSPAN3-208ENST00000560514 Q75L30 129 aa9.16□□□□□ -0.94
TSPAN3-208ENST00000560514 PPDPFLQ8WWR9 84 aa9.16□□□□□ -0.94
TSPAN3-208ENST00000560514 TRBV20-1A0A075B6N2 111 aa9.15□□□□□ -0.94
TSPAN3-208ENST00000560514 OCIAD2Q56VL3 154 aa9.15□□□□□ -0.94
TSPAN3-208ENST00000560514 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.15□□□□□ -0.94
TSPAN3-208ENST00000560514 Q6ZQY7 126 aa9.15□□□□□ -0.94
TSPAN3-208ENST00000560514 BVES-AS1Q5T3Y7 98 aa9.14□□□□□ -0.95
TSPAN3-208ENST00000560514 OBSCN-AS1Q96MR7 158 aa9.14□□□□□ -0.95
TSPAN3-208ENST00000560514 S100A6P06703 90 aa9.13□□□□□ -0.95
TSPAN3-208ENST00000560514 CLEC2BQ92478 149 aa9.12□□□□□ -0.95
TSPAN3-208ENST00000560514 TRBV7-7A0A0K0K1E9 115 aa9.11□□□□□ -0.95
TSPAN3-208ENST00000560514 S100A1P23297 94 aa9.11□□□□□ -0.95
TSPAN3-208ENST00000560514 SCGB1D1O95968 90 aa9.1□□□□□ -0.95
TSPAN3-208ENST00000560514 IGFL1Q6UW32 110 aa9.1□□□□□ -0.95
TSPAN3-208ENST00000560514 HIST1H4GQ99525 98 aa9.1□□□□□ -0.95
TSPAN3-208ENST00000560514 LINC00846Q9NV44 126 aa9.1□□□□□ -0.95
TSPAN3-208ENST00000560514 DLEU1O43261 78 aa9.09□□□□□ -0.95
TSPAN3-208ENST00000560514 SNHG12Q9BXW3 62 aa9.09□□□□□ -0.95
TSPAN3-208ENST00000560514 MT2AP02795 61 aa9.08□□□□□ -0.96
TSPAN3-208ENST00000560514 COX8AP10176 69 aa9.08□□□□□ -0.96
TSPAN3-208ENST00000560514 SNCGO76070 127 aa9.07□□□□□ -0.96
TSPAN3-208ENST00000560514 H0YGX0 51 aa9.04□□□□□ -0.96
TSPAN3-208ENST00000560514 Q96NJ1 140 aa9.04□□□□□ -0.96
TSPAN3-208ENST00000560514 KRTAP10-10P60014 251 aa9.03□□□□□ -0.96
TSPAN3-208ENST00000560514 FAM236DA0A1B0GTK5 79 aa9.02□□□□□ -0.97
TSPAN3-208ENST00000560514 FAM236CP0DP71 79 aa9.02□□□□□ -0.97
TSPAN3-208ENST00000560514 C12orf57Q99622 126 aa9.02□□□□□ -0.97
TSPAN3-208ENST00000560514 LST1O00453 97 aa9.01□□□□□ -0.97
TSPAN3-208ENST00000560514 MT1FP04733 61 aa9.01□□□□□ -0.97
TSPAN3-208ENST00000560514 HIGD1BQ9P298 99 aa9.01□□□□□ -0.97
TSPAN3-208ENST00000560514 GHRHP01286 108 aa9□□□□□ -0.97
TSPAN3-208ENST00000560514 RAB37Q96AX2 223 aa8.99□□□□□ -0.97
TSPAN3-208ENST00000560514 A0A0B4J2C4 111 aa8.98□□□□□ -0.97
TSPAN3-208ENST00000560514 KRTAP9-3Q9BYQ3 159 aa8.98□□□□□ -0.97
TSPAN3-208ENST00000560514 SS18L2Q9UHA2 77 aa8.98□□□□□ -0.97
TSPAN3-208ENST00000560514 A0A1B0GX51 115 aa8.97□□□□□ -0.97
TSPAN3-208ENST00000560514 TEN1Q86WV5 123 aa8.97□□□□□ -0.97
TSPAN3-208ENST00000560514 H3BUT2 72 aa8.96□□□□□ -0.98
TSPAN3-208ENST00000560514 C14orf144Q96I85 54 aa8.96□□□□□ -0.98
TSPAN3-208ENST00000560514 NDUFV3P56181 108 aaKnown RBP8.95□□□□□ -0.98
TSPAN3-208ENST00000560514 C20orf166-AS1Q96NR2 134 aa8.94□□□□□ -0.98
TSPAN3-208ENST00000560514 SPATA45Q537H7 98 aa8.92□□□□□ -0.98
TSPAN3-208ENST00000560514 FAM218AQ96MZ4 157 aa8.91□□□□□ -0.98
TSPAN3-208ENST00000560514 PRO1854Q9UHT4 67 aa8.91□□□□□ -0.98
TSPAN3-208ENST00000560514 TMEM238LA0A1B0GVL6 79 aa8.9□□□□□ -0.98
TSPAN3-208ENST00000560514 A6NJY4 79 aa8.9□□□□□ -0.98
TSPAN3-208ENST00000560514 A8MUU9 505 aa8.9□□□□□ -0.98
TSPAN3-208ENST00000560514 CEND1Q8N111 149 aa8.9□□□□□ -0.98
TSPAN3-208ENST00000560514 RBM12B-AS1Q9P1G2 102 aa8.9□□□□□ -0.98
TSPAN3-208ENST00000560514 PAM16Q9Y3D7 125 aa8.9□□□□□ -0.98
TSPAN3-208ENST00000560514 H3BMG7 143 aa8.89□□□□□ -0.99
TSPAN3-208ENST00000560514 C2orf91Q6ZV80 131 aa8.89□□□□□ -0.99
TSPAN3-208ENST00000560514 VAMP8Q9BV40 100 aa8.89□□□□□ -0.99
TSPAN3-208ENST00000560514 H3BQ85 93 aa8.87□□□□□ -0.99
TSPAN3-208ENST00000560514 KRTAP19-6Q3LI70 58 aa8.87□□□□□ -0.99
TSPAN3-208ENST00000560514 A0A087WSZ3 146 aa8.85□□□□□ -0.99
TSPAN3-208ENST00000560514 FABP2P12104 132 aa8.85□□□□□ -0.99
TSPAN3-208ENST00000560514 KRTAP6-3Q3LI67 103 aa8.84□□□□□ -0.99
TSPAN3-208ENST00000560514 KRTAP4-8Q9BYQ9 185 aa8.82□□□□□ -1
TSPAN3-208ENST00000560514 A0A1W2PNM2 257 aa8.8□□□□□ -1
TSPAN3-208ENST00000560514 FXYD2P54710 66 aa8.8□□□□□ -1
TSPAN3-208ENST00000560514 TRBV7-4A0A0J9YYF1 115 aa8.79□□□□□ -1
TSPAN3-208ENST00000560514 TRIAP1O43715 76 aa8.79□□□□□ -1
TSPAN3-208ENST00000560514 ANKRD29Q8N6D5 301 aa8.79□□□□□ -1
TSPAN3-208ENST00000560514 TMEM256-PLSCR3K7ERE1 68 aa8.78□□□□□ -1
TSPAN3-208ENST00000560514 DNAL4O96015 105 aa8.77□□□□□ -1.01
TSPAN3-208ENST00000560514 ORMDL1Q9P0S3 153 aa8.77□□□□□ -1.01
TSPAN3-208ENST00000560514 COX6CP09669 75 aa8.76□□□□□ -1.01
TSPAN3-208ENST00000560514 DSCR10P59022 87 aa8.76□□□□□ -1.01
TSPAN3-208ENST00000560514 LINC00313P59037 77 aa8.75□□□□□ -1.01
TSPAN3-208ENST00000560514 HSD52Q0P140 79 aa8.74□□□□□ -1.01
TSPAN3-208ENST00000560514 MTURNQ8N3F0 131 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms