RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 DEFB105AQ8NG35 78 aa6.13□□□□□ -1.43
RTF1-206ENST00000560447 KRTAP4-5Q9BYR2 181 aa6.13□□□□□ -1.43
RTF1-206ENST00000560447 A0A1W2PNN7 141 aa6.12□□□□□ -1.43
RTF1-206ENST00000560447 EPM2AB3EWF7 344 aa6.12□□□□□ -1.43
RTF1-206ENST00000560447 SPRR1BP22528 89 aa6.12□□□□□ -1.43
RTF1-206ENST00000560447 COL7A1Q02388 2944 aa6.11□□□□□ -1.43
RTF1-206ENST00000560447 STAB2Q8WWQ8 2551 aa6.11□□□□□ -1.43
RTF1-206ENST00000560447 IGKV2-24A0A0C4DH68 120 aa6.11□□□□□ -1.43
RTF1-206ENST00000560447 DNAH10Q8IVF4 4471 aa6.11□□□□□ -1.43
RTF1-206ENST00000560447 A0A1W2PNM2 257 aa6.1□□□□□ -1.43
RTF1-206ENST00000560447 BPY2O14599 106 aa6.1□□□□□ -1.43
RTF1-206ENST00000560447 ERC2-IT1O76042 136 aa6.1□□□□□ -1.43
RTF1-206ENST00000560447 SMIM29Q86T20 159 aa6.1□□□□□ -1.43
RTF1-206ENST00000560447 ST20-AS1Q8NBB2 130 aa6.1□□□□□ -1.43
RTF1-206ENST00000560447 SS18L2Q9UHA2 77 aa6.1□□□□□ -1.43
RTF1-206ENST00000560447 DNAH7Q8WXX0 4024 aa6.09□□□□□ -1.43
RTF1-206ENST00000560447 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.09□□□□□ -1.43
RTF1-206ENST00000560447 TMEM258P61165 79 aa6.09□□□□□ -1.43
RTF1-206ENST00000560447 IGKV4-1P06312 121 aa6.07□□□□□ -1.44
RTF1-206ENST00000560447 LINC00476Q8WZB0 136 aa6.07□□□□□ -1.44
RTF1-206ENST00000560447 C3orf84H3BNL1 204 aa6.06□□□□□ -1.44
RTF1-206ENST00000560447 PHF5AQ7RTV0 110 aaKnown RBP6.06□□□□□ -1.44
RTF1-206ENST00000560447 SPACA4Q8TDM5 124 aa6.06□□□□□ -1.44
RTF1-206ENST00000560447 DNAH17Q9UFH2 4485 aa6.06□□□□□ -1.44
RTF1-206ENST00000560447 A0A087WTM6 91 aa6.05□□□□□ -1.44
RTF1-206ENST00000560447 PRLHP81277 87 aa6.05□□□□□ -1.44
RTF1-206ENST00000560447 Q6ZR54 194 aa6.05□□□□□ -1.44
RTF1-206ENST00000560447 HIGD2AQ9BW72 106 aa6.05□□□□□ -1.44
RTF1-206ENST00000560447 DNAH6Q9C0G6 4158 aa6.05□□□□□ -1.44
RTF1-206ENST00000560447 CHTF8P0CG12 524 aa6.04□□□□□ -1.44
RTF1-206ENST00000560447 UBE2AP49459 152 aa6.04□□□□□ -1.44
RTF1-206ENST00000560447 RPL37AP61513 92 aaKnown RBP6.04□□□□□ -1.44
RTF1-206ENST00000560447 RPS28P62857 69 aaKnown RBP6.04□□□□□ -1.44
RTF1-206ENST00000560447 KLKP1Q107X0 134 aa6.04□□□□□ -1.44
RTF1-206ENST00000560447 KRTAP13-1Q8IUC0 172 aa6.04□□□□□ -1.44
RTF1-206ENST00000560447 PRKDCP78527 4128 aaKnown RBP6.03□□□□□ -1.44
RTF1-206ENST00000560447 NDUFC1O43677 76 aa6.03□□□□□ -1.44
RTF1-206ENST00000560447 KRTAP10-2P60368 255 aa6.03□□□□□ -1.44
RTF1-206ENST00000560447 IGFL1Q6UW32 110 aa6.03□□□□□ -1.44
RTF1-206ENST00000560447 SCXQ7RTU7 201 aa6.03□□□□□ -1.44
RTF1-206ENST00000560447 STARD9Q9P2P6 4700 aa6.01□□□□□ -1.45
RTF1-206ENST00000560447 KRTAP21-3Q3LHN1 58 aa6.01□□□□□ -1.45
RTF1-206ENST00000560447 ZNF706Q9Y5V0 76 aaPredicted RBP6.01□□□□□ -1.45
RTF1-206ENST00000560447 CSMD3Q7Z407 3707 aa6.01□□□□□ -1.45
RTF1-206ENST00000560447 C20orf197Q8N268 126 aa6□□□□□ -1.45
RTF1-206ENST00000560447 PLAC8Q9NZF1 115 aa6□□□□□ -1.45
RTF1-206ENST00000560447 DNAH2Q9P225 4427 aa5.99□□□□□ -1.45
RTF1-206ENST00000560447 J3KT08 172 aa5.99□□□□□ -1.45
RTF1-206ENST00000560447 RTL8CO15255 209 aa5.99□□□□□ -1.45
RTF1-206ENST00000560447 KRTAP11-1Q8IUC1 163 aa5.99□□□□□ -1.45
RTF1-206ENST00000560447 OCR1Q9BZK8 76 aa5.99□□□□□ -1.45
RTF1-206ENST00000560447 PLA2G1BP04054 148 aaKnown RBP5.98□□□□□ -1.45
RTF1-206ENST00000560447 ATP5EP56381 51 aaPredicted RBP5.98□□□□□ -1.45
RTF1-206ENST00000560447 DSCR10P59022 87 aa5.98□□□□□ -1.45
RTF1-206ENST00000560447 LINC00483Q53H64 154 aa5.98□□□□□ -1.45
RTF1-206ENST00000560447 C1orf134Q5TEV5 83 aa5.98□□□□□ -1.45
RTF1-206ENST00000560447 DPH3Q96FX2 82 aa5.98□□□□□ -1.45
RTF1-206ENST00000560447 LYSTQ99698 3801 aa5.98□□□□□ -1.45
RTF1-206ENST00000560447 LCE6AA0A183 80 aa5.96□□□□□ -1.46
RTF1-206ENST00000560447 PANO1I0J062 215 aa5.96□□□□□ -1.46
RTF1-206ENST00000560447 Q8N9L7 120 aa5.96□□□□□ -1.46
RTF1-206ENST00000560447 CYSTM1Q9H1C7 97 aa5.96□□□□□ -1.46
RTF1-206ENST00000560447 A0A087WSZ3 146 aa5.95□□□□□ -1.46
RTF1-206ENST00000560447 IGLV5-52A0A0A0MRZ9 124 aa5.95□□□□□ -1.46
RTF1-206ENST00000560447 H7BZZ5 65 aa5.95□□□□□ -1.46
RTF1-206ENST00000560447 TMEM254Q8TBM7 123 aa5.95□□□□□ -1.46
RTF1-206ENST00000560447 FAM236DA0A1B0GTK5 79 aa5.94□□□□□ -1.46
RTF1-206ENST00000560447 HCG22E2RYF7 251 aa5.94□□□□□ -1.46
RTF1-206ENST00000560447 FAM236CP0DP71 79 aa5.94□□□□□ -1.46
RTF1-206ENST00000560447 ALMS1Q8TCU4 4167 aa5.93□□□□□ -1.46
RTF1-206ENST00000560447 K7EQZ3 153 aa5.93□□□□□ -1.46
RTF1-206ENST00000560447 HECTD4Q9Y4D8 3996 aa5.92□□□□□ -1.46
RTF1-206ENST00000560447 A0A0U1RQV1 116 aa5.92□□□□□ -1.46
RTF1-206ENST00000560447 ZNF861PO60384 105 aa5.92□□□□□ -1.46
RTF1-206ENST00000560447 WWC2-AS2Q96NR7 200 aa5.92□□□□□ -1.46
RTF1-206ENST00000560447 LINC00472Q9H8W2 130 aa5.92□□□□□ -1.46
RTF1-206ENST00000560447 A8MWP4 228 aa5.91□□□□□ -1.46
RTF1-206ENST00000560447 C5orf47Q569G3 176 aa5.91□□□□□ -1.46
RTF1-206ENST00000560447 PSORS1C2Q9UIG4 136 aa5.91□□□□□ -1.46
RTF1-206ENST00000560447 DNAH8Q96JB1 4490 aa5.91□□□□□ -1.46
RTF1-206ENST00000560447 TENM2Q9NT68 2774 aa5.9□□□□□ -1.46
RTF1-206ENST00000560447 SERP1Q9Y6X1 66 aa5.9□□□□□ -1.46
RTF1-206ENST00000560447 PRR15Q8IV56 129 aa5.89□□□□□ -1.47
RTF1-206ENST00000560447 DNHD1Q96M86 4753 aa5.88□□□□□ -1.47
RTF1-206ENST00000560447 MEGF8Q7Z7M0 2845 aa5.88□□□□□ -1.47
RTF1-206ENST00000560447 H3BPC8 53 aa5.88□□□□□ -1.47
RTF1-206ENST00000560447 SNURFQ9Y675 71 aa5.88□□□□□ -1.47
RTF1-206ENST00000560447 KRTAP29-1A8MX34 341 aaPredicted RBP5.87□□□□□ -1.47
RTF1-206ENST00000560447 NDUFB1O75438 58 aa5.87□□□□□ -1.47
RTF1-206ENST00000560447 LY6G6CO95867 125 aa5.87□□□□□ -1.47
RTF1-206ENST00000560447 A0A0G2JQZ4 141 aa5.86□□□□□ -1.47
RTF1-206ENST00000560447 IGLV7-43P04211 117 aa5.85□□□□□ -1.47
RTF1-206ENST00000560447 CD164Q04900 197 aa5.85□□□□□ -1.47
RTF1-206ENST00000560447 ZCCHC13Q8WW36 166 aaKnown RBP5.85□□□□□ -1.47
RTF1-206ENST00000560447 FAM30AQ9NZY2 134 aa5.85□□□□□ -1.47
RTF1-206ENST00000560447 DNAH11Q96DT5 4516 aa5.84□□□□□ -1.47
RTF1-206ENST00000560447 MOBPQ13875 183 aa5.84□□□□□ -1.47
RTF1-206ENST00000560447 CASC2Q6XLA1 102 aa5.84□□□□□ -1.47
RTF1-206ENST00000560447 IGLV9-49A0A0B4J1Y8 123 aa5.83□□□□□ -1.48
RTF1-206ENST00000560447 MP68P56378 58 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms