RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 SMKR1H3BMG3 65 aa1.45□□□□□ -2.18
LRRC28-218ENST00000560236 H3BMG7 143 aa1.45□□□□□ -2.18
LRRC28-218ENST00000560236 IGKCP01834 107 aa1.45□□□□□ -2.18
LRRC28-218ENST00000560236 PLNP26678 52 aa1.45□□□□□ -2.18
LRRC28-218ENST00000560236 CKS2P33552 79 aa1.45□□□□□ -2.18
LRRC28-218ENST00000560236 RPS29P62273 56 aaKnown RBP1.45□□□□□ -2.18
LRRC28-218ENST00000560236 TOMM6Q96B49 74 aa1.45□□□□□ -2.18
LRRC28-218ENST00000560236 MRAP2Q96G30 205 aa1.45□□□□□ -2.18
LRRC28-218ENST00000560236 CAMK2N2Q96S95 79 aa1.45□□□□□ -2.18
LRRC28-218ENST00000560236 SIGMAR1Q99720 223 aa1.45□□□□□ -2.18
LRRC28-218ENST00000560236 C20orf78Q9BR46 151 aa1.45□□□□□ -2.18
LRRC28-218ENST00000560236 TMEM243Q9BU79 118 aa1.45□□□□□ -2.18
LRRC28-218ENST00000560236 TPPP3Q9BW30 176 aa1.45□□□□□ -2.18
LRRC28-218ENST00000560236 TTTY13Q9BZ97 58 aa1.45□□□□□ -2.18
LRRC28-218ENST00000560236 MRPL35Q9NZE8 188 aaKnown RBP1.45□□□□□ -2.18
LRRC28-218ENST00000560236 TRBV6-5A0A0K0K1A5 114 aa1.44□□□□□ -2.18
LRRC28-218ENST00000560236 LOC389332A0A1B0GUA5 103 aa1.44□□□□□ -2.18
LRRC28-218ENST00000560236 LINC01549A6NIU2 74 aa1.44□□□□□ -2.18
LRRC28-218ENST00000560236 IGIPA6NJ69 53 aa1.44□□□□□ -2.18
LRRC28-218ENST00000560236 F8VRH5 84 aa1.44□□□□□ -2.18
LRRC28-218ENST00000560236 K7ERJ3 54 aa1.44□□□□□ -2.18
LRRC28-218ENST00000560236 POLR2KP53803 58 aaKnown RBP1.44□□□□□ -2.18
LRRC28-218ENST00000560236 NAA38Q9BRA0 125 aaKnown RBP1.44□□□□□ -2.18
LRRC28-218ENST00000560236 SMIM2Q9BVW6 85 aa1.44□□□□□ -2.18
LRRC28-218ENST00000560236 TMSB15BA0A087X1C1 80 aa1.43□□□□□ -2.18
LRRC28-218ENST00000560236 IGKV3OR2-268A0A0C4DH90 116 aa1.43□□□□□ -2.18
LRRC28-218ENST00000560236 MYMXA0A1B0GTQ4 84 aa1.43□□□□□ -2.18
LRRC28-218ENST00000560236 J3QR89 54 aa1.43□□□□□ -2.18
LRRC28-218ENST00000560236 SLC25A20O43772 301 aa1.43□□□□□ -2.18
LRRC28-218ENST00000560236 BCE1O60756 84 aa1.43□□□□□ -2.18
LRRC28-218ENST00000560236 MT2AP02795 61 aa1.43□□□□□ -2.18
LRRC28-218ENST00000560236 LGALS3P17931 250 aaKnown RBP1.43□□□□□ -2.18
LRRC28-218ENST00000560236 TSPEAR-AS2P59090 65 aa1.43□□□□□ -2.18
LRRC28-218ENST00000560236 ZNF56Q15929 161 aa1.43□□□□□ -2.18
LRRC28-218ENST00000560236 ETDBQ3ZM63 59 aa1.43□□□□□ -2.18
LRRC28-218ENST00000560236 ORMDL2Q53FV1 153 aa1.43□□□□□ -2.18
LRRC28-218ENST00000560236 FAM19A5Q7Z5A7 132 aaPredicted RBP1.43□□□□□ -2.18
LRRC28-218ENST00000560236 TEN1Q86WV5 123 aa1.43□□□□□ -2.18
LRRC28-218ENST00000560236 PPDPFLQ8WWR9 84 aa1.43□□□□□ -2.18
LRRC28-218ENST00000560236 RAB37Q96AX2 223 aa1.43□□□□□ -2.18
LRRC28-218ENST00000560236 AP1S3Q96PC3 154 aa1.43□□□□□ -2.18
LRRC28-218ENST00000560236 TIMM17AQ99595 171 aa1.43□□□□□ -2.18
LRRC28-218ENST00000560236 NHP2Q9NX24 153 aaKnown RBP1.43□□□□□ -2.18
LRRC28-218ENST00000560236 TRBV20-1A0A075B6N2 111 aa1.42□□□□□ -2.18
LRRC28-218ENST00000560236 A0A0B4J2C4 111 aa1.42□□□□□ -2.18
LRRC28-218ENST00000560236 TRBV27A0A0K0K1C4 114 aa1.42□□□□□ -2.18
LRRC28-218ENST00000560236 A0A1B0GV72 72 aa1.42□□□□□ -2.18
LRRC28-218ENST00000560236 C11orf86A6NJI1 115 aa1.42□□□□□ -2.18
LRRC28-218ENST00000560236 H0Y8G0 127 aa1.42□□□□□ -2.18
LRRC28-218ENST00000560236 H3BVH4 76 aa1.42□□□□□ -2.18
LRRC28-218ENST00000560236 TCL1BO95988 128 aa1.42□□□□□ -2.18
LRRC28-218ENST00000560236 PPP1R17O96001 155 aa1.42□□□□□ -2.18
LRRC28-218ENST00000560236 XCL1P47992 114 aa1.42□□□□□ -2.18
LRRC28-218ENST00000560236 UBE2AP49459 152 aa1.42□□□□□ -2.18
LRRC28-218ENST00000560236 SMAGPQ0VAQ4 97 aa1.42□□□□□ -2.18
LRRC28-218ENST00000560236 Q6Q795 121 aa1.42□□□□□ -2.18
LRRC28-218ENST00000560236 Q6ZUT4 128 aa1.42□□□□□ -2.18
LRRC28-218ENST00000560236 PLEKHB2Q96CS7 222 aa1.42□□□□□ -2.18
LRRC28-218ENST00000560236 TMEM141Q96I45 108 aa1.42□□□□□ -2.18
LRRC28-218ENST00000560236 VCX2Q9H322 139 aa1.42□□□□□ -2.18
LRRC28-218ENST00000560236 TRBV30A0A0K0K1B3 111 aa1.41□□□□□ -2.18
LRRC28-218ENST00000560236 LINC00959A0A1B0GUT2 108 aa1.41□□□□□ -2.18
LRRC28-218ENST00000560236 FAM240AA0A1B0GVK7 77 aa1.41□□□□□ -2.18
LRRC28-218ENST00000560236 TMEM223A0PJW6 202 aa1.41□□□□□ -2.18
LRRC28-218ENST00000560236 SDHAF1A6NFY7 115 aa1.41□□□□□ -2.18
LRRC28-218ENST00000560236 ZNF815PA8K554 130 aa1.41□□□□□ -2.18
LRRC28-218ENST00000560236 COX7A2LO14548 114 aa1.41□□□□□ -2.18
LRRC28-218ENST00000560236 NDUFA1O15239 70 aa1.41□□□□□ -2.18
LRRC28-218ENST00000560236 MT-ATP8P03928 68 aa1.41□□□□□ -2.18
LRRC28-218ENST00000560236 MT1FP04733 61 aa1.41□□□□□ -2.18
LRRC28-218ENST00000560236 PMVKQ15126 192 aa1.41□□□□□ -2.18
LRRC28-218ENST00000560236 LYRM7Q5U5X0 104 aa1.41□□□□□ -2.18
LRRC28-218ENST00000560236 RPL39LQ96EH5 51 aaKnown RBP1.41□□□□□ -2.18
LRRC28-218ENST00000560236 SCGB3A1Q96QR1 104 aa1.41□□□□□ -2.18
LRRC28-218ENST00000560236 SPANXDQ9BXN6 97 aa1.41□□□□□ -2.18
LRRC28-218ENST00000560236 GEMIN7Q9H840 131 aaKnown RBP1.41□□□□□ -2.18
LRRC28-218ENST00000560236 SPANXCQ9NY87 97 aa1.41□□□□□ -2.18
LRRC28-218ENST00000560236 PRO1854Q9UHT4 67 aa1.41□□□□□ -2.18
LRRC28-218ENST00000560236 ERG28Q9UKR5 140 aa1.41□□□□□ -2.18
LRRC28-218ENST00000560236 CYSLTR1Q9Y271 337 aa1.41□□□□□ -2.18
LRRC28-218ENST00000560236 GPR98Q8WXG9 6306 aa1.41□□□□□ -2.18
LRRC28-218ENST00000560236 MDN1Q9NU22 5596 aa1.41□□□□□ -2.18
LRRC28-218ENST00000560236 TRBV7-7A0A0K0K1E9 115 aa1.4□□□□□ -2.19
LRRC28-218ENST00000560236 NDUFC2-KCTD14E9PQ53 114 aa1.4□□□□□ -2.19
LRRC28-218ENST00000560236 J3QQQ9 107 aa1.4□□□□□ -2.19
LRRC28-218ENST00000560236 M0QY20 66 aa1.4□□□□□ -2.19
LRRC28-218ENST00000560236 LEPROTO15243 131 aa1.4□□□□□ -2.19
LRRC28-218ENST00000560236 TIMM17BO60830 172 aa1.4□□□□□ -2.19
LRRC28-218ENST00000560236 SPINK8P0C7L1 97 aa1.4□□□□□ -2.19
LRRC28-218ENST00000560236 ZNF22P17026 224 aaPredicted RBP1.4□□□□□ -2.19
LRRC28-218ENST00000560236 CKS1BP61024 79 aa1.4□□□□□ -2.19
LRRC28-218ENST00000560236 MRPS36P82909 103 aaKnown RBP1.4□□□□□ -2.19
LRRC28-218ENST00000560236 SPANXN1Q5VSR9 72 aa1.4□□□□□ -2.19
LRRC28-218ENST00000560236 FAM19A3Q7Z5A8 133 aa1.4□□□□□ -2.19
LRRC28-218ENST00000560236 C3orf22Q8N5N4 141 aa1.4□□□□□ -2.19
LRRC28-218ENST00000560236 ANKRD29Q8N6D5 301 aa1.4□□□□□ -2.19
LRRC28-218ENST00000560236 C22orf24Q9Y442 160 aa1.4□□□□□ -2.19
LRRC28-218ENST00000560236 TRBV10-2A0A0K0K1G8 114 aa1.39□□□□□ -2.19
LRRC28-218ENST00000560236 H3BT86 120 aa1.39□□□□□ -2.19
LRRC28-218ENST00000560236 LST1O00453 97 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms