RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 IGLV5-48A0A075B6I7 105 aa2.49□□□□□ -2.01
SNX1-205ENST00000559339 A0A0U1RQV1 116 aa2.49□□□□□ -2.01
SNX1-205ENST00000559339 H7C2G1 150 aa2.49□□□□□ -2.01
SNX1-205ENST00000559339 LINC00575Q6W349 94 aa2.49□□□□□ -2.01
SNX1-205ENST00000559339 KRTAP19-1Q8IUB9 90 aa2.49□□□□□ -2.01
SNX1-205ENST00000559339 Q8N377 158 aa2.49□□□□□ -2.01
SNX1-205ENST00000559339 C12orf57Q99622 126 aa2.49□□□□□ -2.01
SNX1-205ENST00000559339 KRTAP4-12Q9BQ66 201 aa2.49□□□□□ -2.01
SNX1-205ENST00000559339 A0A0B4J2C4 111 aa2.48□□□□□ -2.01
SNX1-205ENST00000559339 H0YGX0 51 aa2.48□□□□□ -2.01
SNX1-205ENST00000559339 CFC1BP0CG36 223 aa2.48□□□□□ -2.01
SNX1-205ENST00000559339 CFC1P0CG37 223 aa2.48□□□□□ -2.01
SNX1-205ENST00000559339 CD164Q04900 197 aa2.48□□□□□ -2.01
SNX1-205ENST00000559339 HRCT1Q6UXD1 115 aa2.48□□□□□ -2.01
SNX1-205ENST00000559339 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.48□□□□□ -2.01
SNX1-205ENST00000559339 Q6ZQY7 126 aa2.48□□□□□ -2.01
SNX1-205ENST00000559339 PPDPFLQ8WWR9 84 aa2.48□□□□□ -2.01
SNX1-205ENST00000559339 SNHG12Q9BXW3 62 aa2.48□□□□□ -2.01
SNX1-205ENST00000559339 RNF213Q63HN8 5207 aa2.47□□□□□ -2.01
SNX1-205ENST00000559339 LRP2P98164 4655 aa2.47□□□□□ -2.01
SNX1-205ENST00000559339 OCIAD2Q56VL3 154 aa2.47□□□□□ -2.01
SNX1-205ENST00000559339 PYY3Q5JQD4 70 aa2.47□□□□□ -2.01
SNX1-205ENST00000559339 LCE3BQ5TA77 95 aa2.47□□□□□ -2.01
SNX1-205ENST00000559339 Q6JHZ5 121 aa2.47□□□□□ -2.01
SNX1-205ENST00000559339 SMIM29Q86T20 159 aa2.47□□□□□ -2.01
SNX1-205ENST00000559339 CEND1Q8N111 149 aa2.47□□□□□ -2.01
SNX1-205ENST00000559339 KRTAP9-2Q9BYQ4 174 aa2.47□□□□□ -2.01
SNX1-205ENST00000559339 PRO1854Q9UHT4 67 aa2.47□□□□□ -2.01
SNX1-205ENST00000559339 KRTAP9-6A0A140TA67 174 aa2.46□□□□□ -2.02
SNX1-205ENST00000559339 TCL1BO95988 128 aa2.46□□□□□ -2.02
SNX1-205ENST00000559339 COX6CP09669 75 aa2.46□□□□□ -2.02
SNX1-205ENST00000559339 LINC01547P58512 204 aaPredicted RBP2.46□□□□□ -2.02
SNX1-205ENST00000559339 HSD52Q0P140 79 aa2.46□□□□□ -2.02
SNX1-205ENST00000559339 C2orf91Q6ZV80 131 aa2.46□□□□□ -2.02
SNX1-205ENST00000559339 UQCR10Q9UDW1 63 aa2.46□□□□□ -2.02
SNX1-205ENST00000559339 A0A1B0GX51 115 aa2.45□□□□□ -2.02
SNX1-205ENST00000559339 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.45□□□□□ -2.02
SNX1-205ENST00000559339 DNAL4O96015 105 aa2.45□□□□□ -2.02
SNX1-205ENST00000559339 PSMB2P49721 201 aa2.45□□□□□ -2.02
SNX1-205ENST00000559339 SEC61BP60468 96 aaKnown RBP2.45□□□□□ -2.02
SNX1-205ENST00000559339 KRTAP13-3Q3SY46 172 aa2.45□□□□□ -2.02
SNX1-205ENST00000559339 Q5XG85 94 aa2.45□□□□□ -2.02
SNX1-205ENST00000559339 CLEC2BQ92478 149 aa2.45□□□□□ -2.02
SNX1-205ENST00000559339 MUC2Q02817 5179 aa2.44□□□□□ -2.02
SNX1-205ENST00000559339 LPAP08519 4548 aa2.44□□□□□ -2.02
SNX1-205ENST00000559339 H3BQ85 93 aa2.44□□□□□ -2.02
SNX1-205ENST00000559339 FABP2P12104 132 aa2.44□□□□□ -2.02
SNX1-205ENST00000559339 FXYD2P54710 66 aa2.44□□□□□ -2.02
SNX1-205ENST00000559339 IGLV8-61A0A075B6I0 122 aa2.43□□□□□ -2.02
SNX1-205ENST00000559339 A0A0G2JQZ4 141 aa2.43□□□□□ -2.02
SNX1-205ENST00000559339 TRIAP1O43715 76 aa2.43□□□□□ -2.02
SNX1-205ENST00000559339 NDUFV3P56181 108 aaKnown RBP2.43□□□□□ -2.02
SNX1-205ENST00000559339 IGFL1Q6UW32 110 aa2.43□□□□□ -2.02
SNX1-205ENST00000559339 TRBV7-7A0A0K0K1E9 115 aa2.42□□□□□ -2.02
SNX1-205ENST00000559339 H3BMG7 143 aa2.42□□□□□ -2.02
SNX1-205ENST00000559339 H3BUT2 72 aa2.42□□□□□ -2.02
SNX1-205ENST00000559339 TMEM256-PLSCR3K7ERE1 68 aa2.42□□□□□ -2.02
SNX1-205ENST00000559339 K7ERJ3 54 aa2.42□□□□□ -2.02
SNX1-205ENST00000559339 SCGB1C2P0DMR2 95 aa2.42□□□□□ -2.02
SNX1-205ENST00000559339 ASB16-AS1Q495Z4 193 aa2.42□□□□□ -2.02
SNX1-205ENST00000559339 C1orf195Q5TG92 126 aa2.42□□□□□ -2.02
SNX1-205ENST00000559339 FAM218AQ96MZ4 157 aa2.42□□□□□ -2.02
SNX1-205ENST00000559339 ORMDL1Q9P0S3 153 aa2.42□□□□□ -2.02
SNX1-205ENST00000559339 SS18L2Q9UHA2 77 aa2.42□□□□□ -2.02
SNX1-205ENST00000559339 KRTAP23-1A1A580 65 aa2.41□□□□□ -2.02
SNX1-205ENST00000559339 C9orf92A6NGG3 77 aa2.41□□□□□ -2.02
SNX1-205ENST00000559339 M0R143 59 aa2.41□□□□□ -2.02
SNX1-205ENST00000559339 LST1O00453 97 aa2.41□□□□□ -2.02
SNX1-205ENST00000559339 TEN1Q86WV5 123 aa2.41□□□□□ -2.02
SNX1-205ENST00000559339 SMIM6P0DI80 62 aa2.4□□□□□ -2.03
SNX1-205ENST00000559339 Q6Q795 121 aa2.4□□□□□ -2.03
SNX1-205ENST00000559339 A0A087WSZ3 146 aa2.39□□□□□ -2.03
SNX1-205ENST00000559339 TSTD3H0UI37 97 aa2.39□□□□□ -2.03
SNX1-205ENST00000559339 TRACP01848 142 aa2.39□□□□□ -2.03
SNX1-205ENST00000559339 UBE2V1Q13404 147 aa2.39□□□□□ -2.03
SNX1-205ENST00000559339 ANKRD29Q8N6D5 301 aa2.39□□□□□ -2.03
SNX1-205ENST00000559339 TRBV7-4A0A0J9YYF1 115 aa2.38□□□□□ -2.03
SNX1-205ENST00000559339 RBM3P98179 157 aaKnown RBP2.38□□□□□ -2.03
SNX1-205ENST00000559339 LYRM7Q5U5X0 104 aa2.38□□□□□ -2.03
SNX1-205ENST00000559339 DSCR8Q96T75 97 aa2.38□□□□□ -2.03
SNX1-205ENST00000559339 KRTAP3-1Q9BYR8 98 aa2.38□□□□□ -2.03
SNX1-205ENST00000559339 A0A1B0GV72 72 aa2.37□□□□□ -2.03
SNX1-205ENST00000559339 CCKP06307 115 aa2.37□□□□□ -2.03
SNX1-205ENST00000559339 ATXN8Q156A1 80 aa2.37□□□□□ -2.03
SNX1-205ENST00000559339 PCOTHQ58A44 107 aa2.37□□□□□ -2.03
SNX1-205ENST00000559339 ATP11AUNQ6ZP68 121 aa2.37□□□□□ -2.03
SNX1-205ENST00000559339 OBSCN-AS1Q96MR7 158 aa2.37□□□□□ -2.03
SNX1-205ENST00000559339 TRBV20-1A0A075B6N2 111 aa2.36□□□□□ -2.03
SNX1-205ENST00000559339 C9JAW5 83 aa2.36□□□□□ -2.03
SNX1-205ENST00000559339 JMJD7-PLA2G4BH0Y9G9 81 aa2.36□□□□□ -2.03
SNX1-205ENST00000559339 BAALC-AS2P0C853 105 aa2.36□□□□□ -2.03
SNX1-205ENST00000559339 RPL37P61927 97 aaKnown RBP2.36□□□□□ -2.03
SNX1-205ENST00000559339 BATFQ16520 125 aa2.36□□□□□ -2.03
SNX1-205ENST00000559339 VPS25Q9BRG1 176 aa2.36□□□□□ -2.03
SNX1-205ENST00000559339 A0A1W2PNM2 257 aa2.35□□□□□ -2.03
SNX1-205ENST00000559339 IGKV4-1P06312 121 aa2.35□□□□□ -2.03
SNX1-205ENST00000559339 PDE6GP18545 87 aa2.35□□□□□ -2.03
SNX1-205ENST00000559339 LCE4AQ5TA78 99 aa2.35□□□□□ -2.03
SNX1-205ENST00000559339 Q75L30 129 aa2.35□□□□□ -2.03
SNX1-205ENST00000559339 Q96NJ1 140 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms