RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 C1orf137Q5JT78 98 aa3.56□□□□□ -1.84
GABPB1-207ENST00000558335 Q8NBF4 154 aa3.56□□□□□ -1.84
GABPB1-207ENST00000558335 C7orf33Q8WU49 177 aa3.56□□□□□ -1.84
GABPB1-207ENST00000558335 SPRR4Q96PI1 79 aa3.56□□□□□ -1.84
GABPB1-207ENST00000558335 REG3GQ6UW15 175 aa3.55□□□□□ -1.84
GABPB1-207ENST00000558335 Q8N377 158 aa3.55□□□□□ -1.84
GABPB1-207ENST00000558335 LINC00476Q8WZB0 136 aa3.55□□□□□ -1.84
GABPB1-207ENST00000558335 SMR3AQ99954 134 aa3.55□□□□□ -1.84
GABPB1-207ENST00000558335 C2CD3Q4AC94 2353 aa3.54□□□□□ -1.84
GABPB1-207ENST00000558335 AKAP9Q99996 3911 aa3.54□□□□□ -1.84
GABPB1-207ENST00000558335 IGLV8-61A0A075B6I0 122 aa3.53□□□□□ -1.84
GABPB1-207ENST00000558335 IGLV7-46A0A075B6I9 117 aa3.53□□□□□ -1.84
GABPB1-207ENST00000558335 A8MU10 97 aa3.53□□□□□ -1.84
GABPB1-207ENST00000558335 KRTAP4-16G5E9R7 235 aaPredicted RBP3.53□□□□□ -1.84
GABPB1-207ENST00000558335 H0Y9P7 68 aa3.53□□□□□ -1.84
GABPB1-207ENST00000558335 RTL8CO15255 209 aa3.53□□□□□ -1.84
GABPB1-207ENST00000558335 SPAG11AQ6PDA7 123 aa3.53□□□□□ -1.84
GABPB1-207ENST00000558335 KRTAP19-1Q8IUB9 90 aa3.53□□□□□ -1.84
GABPB1-207ENST00000558335 DEFB105AQ8NG35 78 aa3.53□□□□□ -1.84
GABPB1-207ENST00000558335 JMJD1CQ15652 2540 aa3.53□□□□□ -1.84
GABPB1-207ENST00000558335 SONP18583 2426 aaKnown RBP3.53□□□□□ -1.84
GABPB1-207ENST00000558335 PDZD2O15018 2839 aa3.52□□□□□ -1.85
GABPB1-207ENST00000558335 RPL37AP61513 92 aaKnown RBP3.52□□□□□ -1.85
GABPB1-207ENST00000558335 SEC61BP60468 96 aaKnown RBP3.51□□□□□ -1.85
GABPB1-207ENST00000558335 SMIM29Q86T20 159 aa3.51□□□□□ -1.85
GABPB1-207ENST00000558335 COA5Q86WW8 74 aa3.51□□□□□ -1.85
GABPB1-207ENST00000558335 KRTAP9-9Q9BYP9 154 aa3.51□□□□□ -1.85
GABPB1-207ENST00000558335 KRTAP9-4Q9BYQ2 154 aa3.51□□□□□ -1.85
GABPB1-207ENST00000558335 CCDC168Q8NDH2 2452 aa3.5□□□□□ -1.85
GABPB1-207ENST00000558335 M0R2N4 97 aa3.5□□□□□ -1.85
GABPB1-207ENST00000558335 KRTAP10-11P60412 298 aa3.5□□□□□ -1.85
GABPB1-207ENST00000558335 ROMO1P60602 79 aa3.5□□□□□ -1.85
GABPB1-207ENST00000558335 C1orf134Q5TEV5 83 aa3.5□□□□□ -1.85
GABPB1-207ENST00000558335 A0A1W2PNM2 257 aa3.49□□□□□ -1.85
GABPB1-207ENST00000558335 CDK2AP2O75956 126 aa3.49□□□□□ -1.85
GABPB1-207ENST00000558335 SPRR1BP22528 89 aa3.49□□□□□ -1.85
GABPB1-207ENST00000558335 SPATA8Q6RVD6 105 aa3.49□□□□□ -1.85
GABPB1-207ENST00000558335 NF1P21359 2839 aa3.48□□□□□ -1.85
GABPB1-207ENST00000558335 GCN1Q92616 2671 aaKnown RBP3.48□□□□□ -1.85
GABPB1-207ENST00000558335 ANK3Q12955 4377 aaKnown RBP3.48□□□□□ -1.85
GABPB1-207ENST00000558335 UBE2DNLQ8IWF7 75 aa3.48□□□□□ -1.85
GABPB1-207ENST00000558335 C9orf163Q8N9P6 203 aa3.48□□□□□ -1.85
GABPB1-207ENST00000558335 ZFYVE26Q68DK2 2539 aa3.47□□□□□ -1.85
GABPB1-207ENST00000558335 NOTCH2Q04721 2471 aa3.47□□□□□ -1.85
GABPB1-207ENST00000558335 KRTAP16-1A8MUX0 517 aa3.47□□□□□ -1.85
GABPB1-207ENST00000558335 PRAC1Q96KF2 57 aa3.47□□□□□ -1.85
GABPB1-207ENST00000558335 TP53AIP1Q9HCN2 124 aa3.47□□□□□ -1.85
GABPB1-207ENST00000558335 UNC79Q9P2D8 2635 aa3.47□□□□□ -1.85
GABPB1-207ENST00000558335 FN1P02751 2386 aaKnown RBP3.46□□□□□ -1.86
GABPB1-207ENST00000558335 A0A087WSZ3 146 aa3.46□□□□□ -1.86
GABPB1-207ENST00000558335 DSCR10P59022 87 aa3.46□□□□□ -1.86
GABPB1-207ENST00000558335 MTORP42345 2549 aa3.46□□□□□ -1.86
GABPB1-207ENST00000558335 SETD2Q9BYW2 2564 aaPredicted RBP3.46□□□□□ -1.86
GABPB1-207ENST00000558335 CSMD2Q7Z408 3487 aa3.45□□□□□ -1.86
GABPB1-207ENST00000558335 KRTAP4-8A0A0G2JLE6 195 aa3.45□□□□□ -1.86
GABPB1-207ENST00000558335 A8MWP4 228 aa3.45□□□□□ -1.86
GABPB1-207ENST00000558335 UQCR11O14957 56 aa3.45□□□□□ -1.86
GABPB1-207ENST00000558335 SPINK7P58062 85 aa3.45□□□□□ -1.86
GABPB1-207ENST00000558335 KRTAP24-1Q3LI83 254 aa3.45□□□□□ -1.86
GABPB1-207ENST00000558335 IGFL1Q6UW32 110 aa3.45□□□□□ -1.86
GABPB1-207ENST00000558335 Q8N9L7 120 aa3.45□□□□□ -1.86
GABPB1-207ENST00000558335 ACANP16112 2415 aa3.45□□□□□ -1.86
GABPB1-207ENST00000558335 TEP1Q99973 2627 aaKnown RBP3.44□□□□□ -1.86
GABPB1-207ENST00000558335 TENM4Q6N022 2769 aa3.44□□□□□ -1.86
GABPB1-207ENST00000558335 NUPR2A6NF83 97 aa3.44□□□□□ -1.86
GABPB1-207ENST00000558335 K7EQZ3 153 aa3.44□□□□□ -1.86
GABPB1-207ENST00000558335 MIR22HGQ0VDD5 57 aa3.44□□□□□ -1.86
GABPB1-207ENST00000558335 ST20-AS1Q8NBB2 130 aa3.44□□□□□ -1.86
GABPB1-207ENST00000558335 NSD1Q96L73 2696 aaPredicted RBP3.43□□□□□ -1.86
GABPB1-207ENST00000558335 FAM168BA1KXE4 195 aa3.43□□□□□ -1.86
GABPB1-207ENST00000558335 PRR4Q16378 134 aa3.43□□□□□ -1.86
GABPB1-207ENST00000558335 CSAG1Q6PB30 78 aa3.43□□□□□ -1.86
GABPB1-207ENST00000558335 ITPR2Q14571 2701 aa3.42□□□□□ -1.86
GABPB1-207ENST00000558335 A0A096LNI7 61 aa3.42□□□□□ -1.86
GABPB1-207ENST00000558335 K7ERS5 55 aa3.42□□□□□ -1.86
GABPB1-207ENST00000558335 ZNF469Q96JG9 3925 aaPredicted RBP3.42□□□□□ -1.86
GABPB1-207ENST00000558335 NBPF19A0A087WUL8 3843 aa3.41□□□□□ -1.86
GABPB1-207ENST00000558335 IGKV2-24A0A0C4DH68 120 aa3.41□□□□□ -1.86
GABPB1-207ENST00000558335 DMAC1Q96GE9 116 aa3.41□□□□□ -1.86
GABPB1-207ENST00000558335 NBEAL2Q6ZNJ1 2754 aa3.41□□□□□ -1.86
GABPB1-207ENST00000558335 KRTAP29-1A8MX34 341 aaPredicted RBP3.4□□□□□ -1.87
GABPB1-207ENST00000558335 PRLHP81277 87 aa3.4□□□□□ -1.87
GABPB1-207ENST00000558335 Q6ZR54 194 aa3.4□□□□□ -1.87
GABPB1-207ENST00000558335 KRTAP7-1Q8IUC3 87 aa3.4□□□□□ -1.87
GABPB1-207ENST00000558335 LINC00472Q9H8W2 130 aa3.4□□□□□ -1.87
GABPB1-207ENST00000558335 FASNP49327 2511 aaKnown RBP3.4□□□□□ -1.87
GABPB1-207ENST00000558335 NIPBLQ6KC79 2804 aaeCLIP3.39□□□□□ -1.87
GABPB1-207ENST00000558335 NBDYA0A0U1RRE5 68 aa3.39□□□□□ -1.87
GABPB1-207ENST00000558335 K7EIL1 84 aa3.39□□□□□ -1.87
GABPB1-207ENST00000558335 KRTAP25-1Q3LHN0 102 aa3.39□□□□□ -1.87
GABPB1-207ENST00000558335 WFDC13Q8IUB5 93 aa3.39□□□□□ -1.87
GABPB1-207ENST00000558335 APLNQ9ULZ1 77 aa3.39□□□□□ -1.87
GABPB1-207ENST00000558335 HELZ2Q9BYK8 2649 aaKnown RBP3.38□□□□□ -1.87
GABPB1-207ENST00000558335 A0A1W2PNN7 141 aa3.38□□□□□ -1.87
GABPB1-207ENST00000558335 LINC00483Q53H64 154 aa3.38□□□□□ -1.87
GABPB1-207ENST00000558335 CASC10Q5T4H9 136 aa3.38□□□□□ -1.87
GABPB1-207ENST00000558335 ATRQ13535 2644 aa3.37□□□□□ -1.87
GABPB1-207ENST00000558335 ACYP2P14621 99 aa3.37□□□□□ -1.87
GABPB1-207ENST00000558335 ADM2Q7Z4H4 148 aa3.37□□□□□ -1.87
GABPB1-207ENST00000558335 HIVEP1P15822 2718 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms