RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 GOLGB1Q14789 3259 aaKnown RBP2.29□□□□□ -2.04
ATXN3-248ENST00000558190 TLX1NBP0CAT3 122 aa2.29□□□□□ -2.04
ATXN3-248ENST00000558190 CFAP46Q8IYW2 2715 aa2.29□□□□□ -2.04
ATXN3-248ENST00000558190 NDUFAF8A1L188 74 aa2.29□□□□□ -2.04
ATXN3-248ENST00000558190 SRCAPQ6ZRS2 3230 aa2.29□□□□□ -2.04
ATXN3-248ENST00000558190 ZCCHC13Q8WW36 166 aaKnown RBP2.29□□□□□ -2.04
ATXN3-248ENST00000558190 Q5W150 140 aa2.29□□□□□ -2.04
ATXN3-248ENST00000558190 REV3LO60673 3130 aa2.29□□□□□ -2.04
ATXN3-248ENST00000558190 PANO1I0J062 215 aa2.28□□□□□ -2.04
ATXN3-248ENST00000558190 NBDYA0A0U1RRE5 68 aa2.27□□□□□ -2.05
ATXN3-248ENST00000558190 KRTAP10-11P60412 298 aa2.27□□□□□ -2.05
ATXN3-248ENST00000558190 MAP1AP78559 2803 aaPredicted RBP2.27□□□□□ -2.05
ATXN3-248ENST00000558190 KRTAP29-1A8MX34 341 aaPredicted RBP2.27□□□□□ -2.05
ATXN3-248ENST00000558190 A0A087X002 238 aa2.26□□□□□ -2.05
ATXN3-248ENST00000558190 NOTCH2NLQ7Z3S9 236 aa2.26□□□□□ -2.05
ATXN3-248ENST00000558190 UTP20O75691 2785 aaKnown RBP2.26□□□□□ -2.05
ATXN3-248ENST00000558190 KRTAP10-3P60369 221 aa2.26□□□□□ -2.05
ATXN3-248ENST00000558190 TRANK1O15050 2925 aa2.25□□□□□ -2.05
ATXN3-248ENST00000558190 TENM3Q9P273 2699 aa2.25□□□□□ -2.05
ATXN3-248ENST00000558190 KRTAP25-1Q3LHN0 102 aa2.25□□□□□ -2.05
ATXN3-248ENST00000558190 KRTAP26-1Q6PEX3 210 aa2.25□□□□□ -2.05
ATXN3-248ENST00000558190 IGLV5-37A0A075B6J1 123 aa2.24□□□□□ -2.05
ATXN3-248ENST00000558190 PCSK5Q92824 1860 aa2.24□□□□□ -2.05
ATXN3-248ENST00000558190 H1FX-AS1Q4G0G2 97 aa2.24□□□□□ -2.05
ATXN3-248ENST00000558190 PSORS1C2Q9UIG4 136 aa2.24□□□□□ -2.05
ATXN3-248ENST00000558190 RPL37P61927 97 aaKnown RBP2.24□□□□□ -2.05
ATXN3-248ENST00000558190 KRTAP11-1Q8IUC1 163 aa2.24□□□□□ -2.05
ATXN3-248ENST00000558190 UTRNP46939 3433 aa2.23□□□□□ -2.05
ATXN3-248ENST00000558190 LINC00304Q8N9R0 145 aa2.23□□□□□ -2.05
ATXN3-248ENST00000558190 NBEAL2Q6ZNJ1 2754 aa2.23□□□□□ -2.05
ATXN3-248ENST00000558190 SMR3BP02814 79 aaPredicted RBP2.22□□□□□ -2.05
ATXN3-248ENST00000558190 MMP24-AS1A0A0U1RRL7 71 aa2.22□□□□□ -2.05
ATXN3-248ENST00000558190 UBR5O95071 2799 aaPredicted RBP2.22□□□□□ -2.05
ATXN3-248ENST00000558190 CHD9Q3L8U1 2897 aa2.22□□□□□ -2.05
ATXN3-248ENST00000558190 A0A087WTM6 91 aa2.22□□□□□ -2.05
ATXN3-248ENST00000558190 PLAC4Q8WY50 150 aa2.21□□□□□ -2.06
ATXN3-248ENST00000558190 COL27A1Q8IZC6 1860 aaPredicted RBP2.21□□□□□ -2.06
ATXN3-248ENST00000558190 SPRR1AP35321 89 aa2.21□□□□□ -2.06
ATXN3-248ENST00000558190 MKI67P46013 3256 aaKnown RBP2.2□□□□□ -2.06
ATXN3-248ENST00000558190 LAMA2P24043 3122 aaKnown RBP2.2□□□□□ -2.06
ATXN3-248ENST00000558190 C5orf42Q9H799 3197 aa2.2□□□□□ -2.06
ATXN3-248ENST00000558190 SEC61BP60468 96 aaKnown RBP2.2□□□□□ -2.06
ATXN3-248ENST00000558190 SPRR1BP22528 89 aa2.2□□□□□ -2.06
ATXN3-248ENST00000558190 CAMK2N1Q7Z7J9 78 aa2.2□□□□□ -2.06
ATXN3-248ENST00000558190 COL4A2P08572 1712 aa2.19□□□□□ -2.06
ATXN3-248ENST00000558190 TNP2Q05952 138 aa2.18□□□□□ -2.06
ATXN3-248ENST00000558190 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.18□□□□□ -2.06
ATXN3-248ENST00000558190 LCE6AA0A183 80 aa2.18□□□□□ -2.06
ATXN3-248ENST00000558190 KRTAP4-16G5E9R7 235 aaPredicted RBP2.18□□□□□ -2.06
ATXN3-248ENST00000558190 DSPP15924 2871 aaKnown RBP2.18□□□□□ -2.06
ATXN3-248ENST00000558190 FLNAP21333 2647 aaKnown RBP2.18□□□□□ -2.06
ATXN3-248ENST00000558190 A8MUU9 505 aa2.18□□□□□ -2.06
ATXN3-248ENST00000558190 MUC22E2RYF6 1773 aaPredicted RBP2.17□□□□□ -2.06
ATXN3-248ENST00000558190 ITPR1Q14643 2758 aa2.16□□□□□ -2.06
ATXN3-248ENST00000558190 FLNCQ14315 2725 aa2.16□□□□□ -2.06
ATXN3-248ENST00000558190 TEX15Q9BXT5 2789 aa2.16□□□□□ -2.06
ATXN3-248ENST00000558190 COX6B2Q6YFQ2 88 aa2.16□□□□□ -2.06
ATXN3-248ENST00000558190 C20orf166-AS1Q96NR2 134 aa2.15□□□□□ -2.06
ATXN3-248ENST00000558190 AKAP9Q99996 3911 aa2.15□□□□□ -2.07
ATXN3-248ENST00000558190 FREM2Q5SZK8 3169 aa2.15□□□□□ -2.07
ATXN3-248ENST00000558190 VPS13AQ96RL7 3174 aa2.15□□□□□ -2.07
ATXN3-248ENST00000558190 KRTAP24-1Q3LI83 254 aa2.15□□□□□ -2.07
ATXN3-248ENST00000558190 Q6ZSA8 131 aa2.14□□□□□ -2.07
ATXN3-248ENST00000558190 PDZD2O15018 2839 aa2.14□□□□□ -2.07
ATXN3-248ENST00000558190 MYO15AQ9UKN7 3530 aa2.14□□□□□ -2.07
ATXN3-248ENST00000558190 LINC00483Q53H64 154 aa2.13□□□□□ -2.07
ATXN3-248ENST00000558190 LAMA1P25391 3075 aa2.13□□□□□ -2.07
ATXN3-248ENST00000558190 SPTBN5Q9NRC6 3674 aaKnown RBP2.12□□□□□ -2.07
ATXN3-248ENST00000558190 PLAC8Q9NZF1 115 aa2.12□□□□□ -2.07
ATXN3-248ENST00000558190 PRUNE2Q8WUY3 3088 aa2.12□□□□□ -2.07
ATXN3-248ENST00000558190 KRTAP7-1Q8IUC3 87 aa2.12□□□□□ -2.07
ATXN3-248ENST00000558190 HIVEP1P15822 2718 aa2.11□□□□□ -2.07
ATXN3-248ENST00000558190 NBEAQ8NFP9 2946 aa2.11□□□□□ -2.07
ATXN3-248ENST00000558190 USP34Q70CQ2 3546 aa2.11□□□□□ -2.07
ATXN3-248ENST00000558190 S4R3F8 94 aa2.1□□□□□ -2.07
ATXN3-248ENST00000558190 M0QZ58 72 aa2.1□□□□□ -2.07
ATXN3-248ENST00000558190 TNRC18O15417 2968 aaPredicted RBP2.1□□□□□ -2.07
ATXN3-248ENST00000558190 CFAP54Q96N23 3096 aa2.1□□□□□ -2.07
ATXN3-248ENST00000558190 BRCA2P51587 3418 aa2.1□□□□□ -2.07
ATXN3-248ENST00000558190 C10orf95Q9H7T3 257 aa2.1□□□□□ -2.07
ATXN3-248ENST00000558190 TRIOO75962 3097 aa2.1□□□□□ -2.07
ATXN3-248ENST00000558190 TENM4Q6N022 2769 aa2.1□□□□□ -2.07
ATXN3-248ENST00000558190 HTTP42858 3142 aa2.1□□□□□ -2.07
ATXN3-248ENST00000558190 J3QL48 77 aa2.09□□□□□ -2.07
ATXN3-248ENST00000558190 KRTAP10-8P60410 259 aa2.08□□□□□ -2.08
ATXN3-248ENST00000558190 ITPR2Q14571 2701 aa2.08□□□□□ -2.08
ATXN3-248ENST00000558190 CHD7Q9P2D1 2997 aa2.08□□□□□ -2.08
ATXN3-248ENST00000558190 KRTAP10-1P60331 282 aa2.08□□□□□ -2.08
ATXN3-248ENST00000558190 UNC80Q8N2C7 3258 aa2.07□□□□□ -2.08
ATXN3-248ENST00000558190 RANBP2P49792 3224 aaKnown RBP2.07□□□□□ -2.08
ATXN3-248ENST00000558190 BOD1L1Q8NFC6 3051 aa2.07□□□□□ -2.08
ATXN3-248ENST00000558190 R4GN34 69 aa2.07□□□□□ -2.08
ATXN3-248ENST00000558190 WWC2-AS2Q96NR7 200 aa2.05□□□□□ -2.08
ATXN3-248ENST00000558190 CFAP47Q6ZTR5 3102 aa2.04□□□□□ -2.08
ATXN3-248ENST00000558190 TPRXLQ17RH7 258 aa2.04□□□□□ -2.08
ATXN3-248ENST00000558190 CRYBG3Q68DQ2 2970 aa2.04□□□□□ -2.08
ATXN3-248ENST00000558190 FRYQ5TBA9 3013 aa2.04□□□□□ -2.08
ATXN3-248ENST00000558190 MGAQ8IWI9 3026 aa2.04□□□□□ -2.08
ATXN3-248ENST00000558190 NIPBLQ6KC79 2804 aaeCLIP2.04□□□□□ -2.08
ATXN3-248ENST00000558190 M0R2T5 61 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms