RNA–Protein interactions for RNA: ENST00000557446.5

HIF1A-211, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 5

Gene HIF1A, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-211ENST00000557446 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.11□□□□□ -0.63
HIF1A-211ENST00000557446 UQCR10Q9UDW1 63 aa11.11□□□□□ -0.63
HIF1A-211ENST00000557446 PRO1854Q9UHT4 67 aa11.11□□□□□ -0.63
HIF1A-211ENST00000557446 F8WEM9 126 aa11.1□□□□□ -0.63
HIF1A-211ENST00000557446 CD164Q04900 197 aa11.1□□□□□ -0.63
HIF1A-211ENST00000557446 A0A0G2JQZ4 141 aa11.08□□□□□ -0.64
HIF1A-211ENST00000557446 KRTAP13-3Q3SY46 172 aa11.08□□□□□ -0.64
HIF1A-211ENST00000557446 H0YGX0 51 aa11.07□□□□□ -0.64
HIF1A-211ENST00000557446 PPDPFLQ8WWR9 84 aa11.05□□□□□ -0.64
HIF1A-211ENST00000557446 FAM218AQ96MZ4 157 aa11.05□□□□□ -0.64
HIF1A-211ENST00000557446 SNCGO76070 127 aa11.04□□□□□ -0.64
HIF1A-211ENST00000557446 K7ERJ3 54 aa11.03□□□□□ -0.64
HIF1A-211ENST00000557446 RNF213Q63HN8 5207 aa11.02□□□□□ -0.65
HIF1A-211ENST00000557446 TRIAP1O43715 76 aa11.01□□□□□ -0.65
HIF1A-211ENST00000557446 IGLV8-61A0A075B6I0 122 aa11□□□□□ -0.65
HIF1A-211ENST00000557446 Q6JHZ5 121 aa11□□□□□ -0.65
HIF1A-211ENST00000557446 SNHG12Q9BXW3 62 aa11□□□□□ -0.65
HIF1A-211ENST00000557446 OCIAD2Q56VL3 154 aa10.99□□□□□ -0.65
HIF1A-211ENST00000557446 Q5XG85 94 aa10.99□□□□□ -0.65
HIF1A-211ENST00000557446 A0A1B0GX51 115 aa10.98□□□□□ -0.65
HIF1A-211ENST00000557446 IGFL1Q6UW32 110 aa10.98□□□□□ -0.65
HIF1A-211ENST00000557446 CLEC2BQ92478 149 aa10.98□□□□□ -0.65
HIF1A-211ENST00000557446 PSMB2P49721 201 aa10.96□□□□□ -0.65
HIF1A-211ENST00000557446 SMIM6P0DI80 62 aa10.95□□□□□ -0.66
HIF1A-211ENST00000557446 H3BUT2 72 aa10.94□□□□□ -0.66
HIF1A-211ENST00000557446 TCL1BO95988 128 aa10.92□□□□□ -0.66
HIF1A-211ENST00000557446 C1orf195Q5TG92 126 aa10.92□□□□□ -0.66
HIF1A-211ENST00000557446 TRBV7-7A0A0K0K1E9 115 aa10.91□□□□□ -0.66
HIF1A-211ENST00000557446 GHRHP01286 108 aa10.91□□□□□ -0.66
HIF1A-211ENST00000557446 COX6CP09669 75 aa10.91□□□□□ -0.66
HIF1A-211ENST00000557446 NDUFV3P56181 108 aaKnown RBP10.91□□□□□ -0.66
HIF1A-211ENST00000557446 DNAL4O96015 105 aa10.89□□□□□ -0.67
HIF1A-211ENST00000557446 FABP2P12104 132 aa10.88□□□□□ -0.67
HIF1A-211ENST00000557446 XP32Q5T750 250 aa10.88□□□□□ -0.67
HIF1A-211ENST00000557446 MUC17Q685J3 4493 aa10.86□□□□□ -0.67
HIF1A-211ENST00000557446 C9orf92A6NGG3 77 aa10.86□□□□□ -0.67
HIF1A-211ENST00000557446 ASB16-AS1Q495Z4 193 aa10.85□□□□□ -0.67
HIF1A-211ENST00000557446 ORMDL1Q9P0S3 153 aa10.85□□□□□ -0.67
HIF1A-211ENST00000557446 M0R143 59 aa10.84□□□□□ -0.67
HIF1A-211ENST00000557446 SEC61BP60468 96 aaKnown RBP10.84□□□□□ -0.67
HIF1A-211ENST00000557446 H3BMG7 143 aa10.83□□□□□ -0.68
HIF1A-211ENST00000557446 A0A0U1RQV1 116 aa10.82□□□□□ -0.68
HIF1A-211ENST00000557446 LOC105371267A0A1B0GV96 52 aa10.8□□□□□ -0.68
HIF1A-211ENST00000557446 H3BQ85 93 aa10.8□□□□□ -0.68
HIF1A-211ENST00000557446 SCGB1C2P0DMR2 95 aa10.8□□□□□ -0.68
HIF1A-211ENST00000557446 Q6Q795 121 aa10.8□□□□□ -0.68
HIF1A-211ENST00000557446 TEN1Q86WV5 123 aa10.79□□□□□ -0.68
HIF1A-211ENST00000557446 TSTD3H0UI37 97 aa10.78□□□□□ -0.68
HIF1A-211ENST00000557446 TRACP01848 142 aa10.78□□□□□ -0.68
HIF1A-211ENST00000557446 MUC2Q02817 5179 aa10.77□□□□□ -0.69
HIF1A-211ENST00000557446 A0A1B0GV72 72 aa10.77□□□□□ -0.69
HIF1A-211ENST00000557446 TMEM256-PLSCR3K7ERE1 68 aa10.77□□□□□ -0.69
HIF1A-211ENST00000557446 LST1O00453 97 aa10.77□□□□□ -0.69
HIF1A-211ENST00000557446 SS18L2Q9UHA2 77 aa10.76□□□□□ -0.69
HIF1A-211ENST00000557446 A0A087WSZ3 146 aa10.73□□□□□ -0.69
HIF1A-211ENST00000557446 NAA38Q9BRA0 125 aaKnown RBP10.72□□□□□ -0.69
HIF1A-211ENST00000557446 A0A1W2PNM2 257 aa10.71□□□□□ -0.69
HIF1A-211ENST00000557446 UBE2V1Q13404 147 aa10.71□□□□□ -0.69
HIF1A-211ENST00000557446 ANKRD29Q8N6D5 301 aa10.71□□□□□ -0.69
HIF1A-211ENST00000557446 KRTAP4-1Q9BYQ7 146 aa10.71□□□□□ -0.69
HIF1A-211ENST00000557446 BATFQ16520 125 aa10.68□□□□□ -0.7
HIF1A-211ENST00000557446 PCOTHQ58A44 107 aa10.68□□□□□ -0.7
HIF1A-211ENST00000557446 ATXN8Q156A1 80 aa10.65□□□□□ -0.7
HIF1A-211ENST00000557446 TRBV7-4A0A0J9YYF1 115 aa10.64□□□□□ -0.71
HIF1A-211ENST00000557446 RPL37P61927 97 aaKnown RBP10.64□□□□□ -0.71
HIF1A-211ENST00000557446 CCKP06307 115 aa10.63□□□□□ -0.71
HIF1A-211ENST00000557446 BAALC-AS2P0C853 105 aa10.63□□□□□ -0.71
HIF1A-211ENST00000557446 Q96NJ1 140 aa10.62□□□□□ -0.71
HIF1A-211ENST00000557446 LYRM7Q5U5X0 104 aa10.61□□□□□ -0.71
HIF1A-211ENST00000557446 RBM3P98179 157 aaKnown RBP10.6□□□□□ -0.71
HIF1A-211ENST00000557446 OBSCN-AS1Q96MR7 158 aa10.6□□□□□ -0.71
HIF1A-211ENST00000557446 DSCR8Q96T75 97 aa10.58□□□□□ -0.72
HIF1A-211ENST00000557446 VPS25Q9BRG1 176 aa10.58□□□□□ -0.72
HIF1A-211ENST00000557446 SIGMAR1Q99720 223 aa10.57□□□□□ -0.72
HIF1A-211ENST00000557446 FAT4Q6V0I7 4981 aa10.57□□□□□ -0.72
HIF1A-211ENST00000557446 LCE2AQ5TA79 106 aaPredicted RBP10.55□□□□□ -0.72
HIF1A-211ENST00000557446 TRBV20-1A0A075B6N2 111 aa10.53□□□□□ -0.72
HIF1A-211ENST00000557446 C9JAW5 83 aa10.52□□□□□ -0.73
HIF1A-211ENST00000557446 IGKV4-1P06312 121 aa10.52□□□□□ -0.73
HIF1A-211ENST00000557446 C9orf118A6NHY6 69 aa10.51□□□□□ -0.73
HIF1A-211ENST00000557446 Q75L30 129 aa10.51□□□□□ -0.73
HIF1A-211ENST00000557446 JMJD7-PLA2G4BH0Y9G9 81 aa10.5□□□□□ -0.73
HIF1A-211ENST00000557446 TAX1BP3O14907 124 aa10.5□□□□□ -0.73
HIF1A-211ENST00000557446 LINC00472Q9H8W2 130 aa10.49□□□□□ -0.73
HIF1A-211ENST00000557446 DSCR10P59022 87 aa10.48□□□□□ -0.73
HIF1A-211ENST00000557446 DEFB116Q30KQ4 102 aa10.48□□□□□ -0.73
HIF1A-211ENST00000557446 A0A1W2PPM0 123 aa10.46□□□□□ -0.73
HIF1A-211ENST00000557446 ATP11AUNQ6ZP68 121 aa10.45□□□□□ -0.74
HIF1A-211ENST00000557446 Q6ZQT0 140 aa10.45□□□□□ -0.74
HIF1A-211ENST00000557446 LOC110117498A0A087WWA1 95 aa10.44□□□□□ -0.74
HIF1A-211ENST00000557446 C21orf62-AS1Q17RA5 79 aa10.44□□□□□ -0.74
HIF1A-211ENST00000557446 C20orf166-AS1Q96NR2 134 aa10.44□□□□□ -0.74
HIF1A-211ENST00000557446 C14orf132Q9NPU4 83 aa10.43□□□□□ -0.74
HIF1A-211ENST00000557446 A8MUU9 505 aa10.41□□□□□ -0.74
HIF1A-211ENST00000557446 LINC00313P59037 77 aa10.41□□□□□ -0.74
HIF1A-211ENST00000557446 KRTAP19-2Q3LHN2 52 aa10.4□□□□□ -0.74
HIF1A-211ENST00000557446 MTURNQ8N3F0 131 aa10.4□□□□□ -0.74
HIF1A-211ENST00000557446 H3BT86 120 aa10.39□□□□□ -0.75
HIF1A-211ENST00000557446 PDE6GP18545 87 aa10.39□□□□□ -0.75
HIF1A-211ENST00000557446 IGHV6-1A0A0B4J1U7 121 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms