RNA–Protein interactions for RNA: ENST00000556626.5

SPTB-208, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best) BASIC

Gene SPTB, Length 10,153 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-208ENST00000556626 UTP20O75691 2785 aaKnown RBP6.98□□□□□ -1.29
SPTB-208ENST00000556626 C9orf163Q8N9P6 203 aa6.98□□□□□ -1.29
SPTB-208ENST00000556626 A0A1B0GU33 70 aa6.98□□□□□ -1.29
SPTB-208ENST00000556626 Q5VV11 94 aa6.97□□□□□ -1.29
SPTB-208ENST00000556626 PRR26Q8N8Z3 221 aa6.96□□□□□ -1.3
SPTB-208ENST00000556626 KALRNO60229 2985 aa6.96□□□□□ -1.3
SPTB-208ENST00000556626 TEP1Q99973 2627 aaKnown RBP6.96□□□□□ -1.3
SPTB-208ENST00000556626 CNBPP62633 177 aaKnown RBP6.95□□□□□ -1.3
SPTB-208ENST00000556626 LINC00612Q8N6U2 182 aa6.95□□□□□ -1.3
SPTB-208ENST00000556626 ZNF292O60281 2723 aa6.95□□□□□ -1.3
SPTB-208ENST00000556626 IGLV7-43P04211 117 aa6.95□□□□□ -1.3
SPTB-208ENST00000556626 GIG44P09565 113 aaPredicted RBP6.94□□□□□ -1.3
SPTB-208ENST00000556626 DMAC1Q96GE9 116 aa6.94□□□□□ -1.3
SPTB-208ENST00000556626 ANAPC11Q9NYG5 84 aa6.94□□□□□ -1.3
SPTB-208ENST00000556626 PSORS1C2Q9UIG4 136 aa6.94□□□□□ -1.3
SPTB-208ENST00000556626 Q8N9P0 234 aaPredicted RBP6.94□□□□□ -1.3
SPTB-208ENST00000556626 FRYLO94915 3013 aa6.92□□□□□ -1.3
SPTB-208ENST00000556626 BAHCC1Q9P281 2608 aa6.92□□□□□ -1.3
SPTB-208ENST00000556626 ASB16-AS1Q495Z4 193 aa6.91□□□□□ -1.3
SPTB-208ENST00000556626 SETXQ7Z333 2677 aaKnown RBP6.91□□□□□ -1.3
SPTB-208ENST00000556626 CSAG1Q6PB30 78 aa6.9□□□□□ -1.3
SPTB-208ENST00000556626 A0A087WTM6 91 aa6.9□□□□□ -1.3
SPTB-208ENST00000556626 BRCA2P51587 3418 aa6.9□□□□□ -1.3
SPTB-208ENST00000556626 LINC01558Q9Y6Z2 57 aa6.9□□□□□ -1.3
SPTB-208ENST00000556626 LRBAP50851 2863 aa6.89□□□□□ -1.31
SPTB-208ENST00000556626 J3QL48 77 aa6.89□□□□□ -1.31
SPTB-208ENST00000556626 PRAC1Q96KF2 57 aa6.89□□□□□ -1.31
SPTB-208ENST00000556626 HRES1P13985 223 aa6.88□□□□□ -1.31
SPTB-208ENST00000556626 KRTAP10-11P60412 298 aa6.88□□□□□ -1.31
SPTB-208ENST00000556626 KRTAP24-1Q3LI83 254 aa6.88□□□□□ -1.31
SPTB-208ENST00000556626 ZNF575Q86XF7 245 aa6.87□□□□□ -1.31
SPTB-208ENST00000556626 LAMA3Q16787 3333 aa6.87□□□□□ -1.31
SPTB-208ENST00000556626 TACC2O95359 2948 aa6.87□□□□□ -1.31
SPTB-208ENST00000556626 WWC2-AS2Q96NR7 200 aa6.87□□□□□ -1.31
SPTB-208ENST00000556626 PRUNE2Q8WUY3 3088 aa6.86□□□□□ -1.31
SPTB-208ENST00000556626 WDFY4Q6ZS81 3184 aa6.86□□□□□ -1.31
SPTB-208ENST00000556626 C19orf73Q9NVV2 129 aa6.85□□□□□ -1.31
SPTB-208ENST00000556626 UNC80Q8N2C7 3258 aa6.85□□□□□ -1.31
SPTB-208ENST00000556626 NBEAQ8NFP9 2946 aa6.84□□□□□ -1.31
SPTB-208ENST00000556626 CAMK2N1Q7Z7J9 78 aa6.84□□□□□ -1.31
SPTB-208ENST00000556626 LAMA1P25391 3075 aa6.83□□□□□ -1.32
SPTB-208ENST00000556626 A0A096LNT2 108 aa6.83□□□□□ -1.32
SPTB-208ENST00000556626 UBR5O95071 2799 aaPredicted RBP6.82□□□□□ -1.32
SPTB-208ENST00000556626 K7EIL1 84 aa6.81□□□□□ -1.32
SPTB-208ENST00000556626 ASH1LQ9NR48 2969 aaKnown RBP6.81□□□□□ -1.32
SPTB-208ENST00000556626 SPINK7P58062 85 aa6.79□□□□□ -1.32
SPTB-208ENST00000556626 CDH23Q9H251 3354 aa6.78□□□□□ -1.32
SPTB-208ENST00000556626 CASC10Q5T4H9 136 aa6.78□□□□□ -1.32
SPTB-208ENST00000556626 NSD1Q96L73 2696 aaPredicted RBP6.78□□□□□ -1.32
SPTB-208ENST00000556626 MMP24-AS1A0A0U1RRL7 71 aa6.77□□□□□ -1.33
SPTB-208ENST00000556626 USP34Q70CQ2 3546 aa6.76□□□□□ -1.33
SPTB-208ENST00000556626 S4R3F8 94 aa6.76□□□□□ -1.33
SPTB-208ENST00000556626 SMR3BP02814 79 aaPredicted RBP6.75□□□□□ -1.33
SPTB-208ENST00000556626 Q6ZSA8 131 aa6.74□□□□□ -1.33
SPTB-208ENST00000556626 ROMO1P60602 79 aa6.74□□□□□ -1.33
SPTB-208ENST00000556626 ZCCHC13Q8WW36 166 aaKnown RBP6.73□□□□□ -1.33
SPTB-208ENST00000556626 A6NN06 94 aa6.72□□□□□ -1.33
SPTB-208ENST00000556626 VCANP13611 3396 aa6.72□□□□□ -1.33
SPTB-208ENST00000556626 HTTP42858 3142 aa6.72□□□□□ -1.33
SPTB-208ENST00000556626 Q5W150 140 aa6.71□□□□□ -1.34
SPTB-208ENST00000556626 COL12A1Q99715 3063 aa6.71□□□□□ -1.34
SPTB-208ENST00000556626 COL6A3P12111 3177 aa6.7□□□□□ -1.34
SPTB-208ENST00000556626 LINC00472Q9H8W2 130 aa6.7□□□□□ -1.34
SPTB-208ENST00000556626 KRTAP10-3P60369 221 aa6.7□□□□□ -1.34
SPTB-208ENST00000556626 KRTAP16-1A8MUX0 517 aa6.69□□□□□ -1.34
SPTB-208ENST00000556626 CHD9Q3L8U1 2897 aa6.69□□□□□ -1.34
SPTB-208ENST00000556626 BOD1L1Q8NFC6 3051 aa6.69□□□□□ -1.34
SPTB-208ENST00000556626 DMXL2Q8TDJ6 3036 aa6.67□□□□□ -1.34
SPTB-208ENST00000556626 TNP2Q05952 138 aa6.67□□□□□ -1.34
SPTB-208ENST00000556626 SPRR1AP35321 89 aa6.67□□□□□ -1.34
SPTB-208ENST00000556626 RPL37P61927 97 aaKnown RBP6.66□□□□□ -1.34
SPTB-208ENST00000556626 R4GN34 69 aa6.65□□□□□ -1.35
SPTB-208ENST00000556626 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.64□□□□□ -1.35
SPTB-208ENST00000556626 Q8NDZ9 215 aa6.63□□□□□ -1.35
SPTB-208ENST00000556626 IGSF10Q6WRI0 2623 aa6.62□□□□□ -1.35
SPTB-208ENST00000556626 Q6ZR54 194 aa6.61□□□□□ -1.35
SPTB-208ENST00000556626 H1FX-AS1Q4G0G2 97 aa6.6□□□□□ -1.35
SPTB-208ENST00000556626 DMXL1Q9Y485 3027 aa6.59□□□□□ -1.35
SPTB-208ENST00000556626 ZZEF1O43149 2961 aa6.59□□□□□ -1.36
SPTB-208ENST00000556626 PLAC8Q9NZF1 115 aa6.58□□□□□ -1.36
SPTB-208ENST00000556626 M0R2T5 61 aa6.57□□□□□ -1.36
SPTB-208ENST00000556626 SPRR1BP22528 89 aa6.57□□□□□ -1.36
SPTB-208ENST00000556626 A0A087X002 238 aa6.57□□□□□ -1.36
SPTB-208ENST00000556626 ADGRG4Q8IZF6 3080 aa6.57□□□□□ -1.36
SPTB-208ENST00000556626 WDFY3Q8IZQ1 3526 aa6.56□□□□□ -1.36
SPTB-208ENST00000556626 HIVEP1P15822 2718 aa6.55□□□□□ -1.36
SPTB-208ENST00000556626 SZT2Q5T011 3432 aa6.55□□□□□ -1.36
SPTB-208ENST00000556626 KRTAP26-1Q6PEX3 210 aa6.54□□□□□ -1.36
SPTB-208ENST00000556626 FLNCQ14315 2725 aa6.54□□□□□ -1.36
SPTB-208ENST00000556626 CELSR2Q9HCU4 2923 aa6.53□□□□□ -1.36
SPTB-208ENST00000556626 SPATA8Q6RVD6 105 aa6.51□□□□□ -1.37
SPTB-208ENST00000556626 CRYBG3Q68DQ2 2970 aa6.5□□□□□ -1.37
SPTB-208ENST00000556626 KRTAP1-3Q8IUG1 177 aa6.49□□□□□ -1.37
SPTB-208ENST00000556626 M0QZ58 72 aa6.48□□□□□ -1.37
SPTB-208ENST00000556626 SPEGQ15772 3267 aa6.48□□□□□ -1.37
SPTB-208ENST00000556626 CFAP47Q6ZTR5 3102 aa6.48□□□□□ -1.37
SPTB-208ENST00000556626 SPTBN5Q9NRC6 3674 aaKnown RBP6.48□□□□□ -1.37
SPTB-208ENST00000556626 KRTAP25-1Q3LHN0 102 aa6.48□□□□□ -1.37
SPTB-208ENST00000556626 ATMQ13315 3056 aa6.48□□□□□ -1.37
SPTB-208ENST00000556626 LCE6AA0A183 80 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms