RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 Q6ZQY7 126 aa12.05□□□□□ -0.48
ACTN1-220ENST00000556433 CFC1BP0CG36 223 aa12.04□□□□□ -0.48
ACTN1-220ENST00000556433 HIST3H2BBQ8N257 126 aa12.04□□□□□ -0.48
ACTN1-220ENST00000556433 HIST1H2BLQ99880 126 aa12.04□□□□□ -0.48
ACTN1-220ENST00000556433 S100A2P29034 98 aa12.03□□□□□ -0.48
ACTN1-220ENST00000556433 Q6JHZ5 121 aa12.02□□□□□ -0.49
ACTN1-220ENST00000556433 OCIAD2Q56VL3 154 aa11.99□□□□□ -0.49
ACTN1-220ENST00000556433 TRBV7-7A0A0K0K1E9 115 aa11.98□□□□□ -0.49
ACTN1-220ENST00000556433 IGFL1Q6UW32 110 aa11.98□□□□□ -0.49
ACTN1-220ENST00000556433 CLEC2BQ92478 149 aa11.98□□□□□ -0.49
ACTN1-220ENST00000556433 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.96□□□□□ -0.49
ACTN1-220ENST00000556433 COX6B2Q6YFQ2 88 aa11.95□□□□□ -0.5
ACTN1-220ENST00000556433 C12orf57Q99622 126 aa11.95□□□□□ -0.5
ACTN1-220ENST00000556433 M0R2T5 61 aa11.93□□□□□ -0.5
ACTN1-220ENST00000556433 LORP23490 312 aaPredicted RBP11.93□□□□□ -0.5
ACTN1-220ENST00000556433 KRTAP10-6P60371 365 aaPredicted RBP11.93□□□□□ -0.5
ACTN1-220ENST00000556433 HIST1H4GQ99525 98 aa11.93□□□□□ -0.5
ACTN1-220ENST00000556433 BVES-AS1Q5T3Y7 98 aa11.92□□□□□ -0.5
ACTN1-220ENST00000556433 SNHG12Q9BXW3 62 aa11.92□□□□□ -0.5
ACTN1-220ENST00000556433 S100A6P06703 90 aa11.9□□□□□ -0.5
ACTN1-220ENST00000556433 PPDPFLQ8WWR9 84 aa11.9□□□□□ -0.5
ACTN1-220ENST00000556433 SCGB1D1O95968 90 aa11.88□□□□□ -0.51
ACTN1-220ENST00000556433 OBSCN-AS1Q96MR7 158 aa11.88□□□□□ -0.51
ACTN1-220ENST00000556433 H3BUT2 72 aa11.86□□□□□ -0.51
ACTN1-220ENST00000556433 LST1O00453 97 aa11.85□□□□□ -0.51
ACTN1-220ENST00000556433 COX8AP10176 69 aa11.85□□□□□ -0.51
ACTN1-220ENST00000556433 ATP11AUNQ6ZP68 121 aa11.85□□□□□ -0.51
ACTN1-220ENST00000556433 Q75L30 129 aa11.83□□□□□ -0.52
ACTN1-220ENST00000556433 FLGP20930 4061 aaPredicted RBP11.81□□□□□ -0.52
ACTN1-220ENST00000556433 S100A1P23297 94 aa11.81□□□□□ -0.52
ACTN1-220ENST00000556433 DLEU1O43261 78 aa11.8□□□□□ -0.52
ACTN1-220ENST00000556433 CFC1P0CG37 223 aa11.8□□□□□ -0.52
ACTN1-220ENST00000556433 RAB37Q96AX2 223 aa11.79□□□□□ -0.52
ACTN1-220ENST00000556433 SNCGO76070 127 aa11.78□□□□□ -0.52
ACTN1-220ENST00000556433 Q6Q795 121 aa11.78□□□□□ -0.52
ACTN1-220ENST00000556433 Q96NJ1 140 aa11.78□□□□□ -0.52
ACTN1-220ENST00000556433 H0YGX0 51 aa11.76□□□□□ -0.53
ACTN1-220ENST00000556433 C14orf144Q96I85 54 aa11.76□□□□□ -0.53
ACTN1-220ENST00000556433 SS18L2Q9UHA2 77 aa11.76□□□□□ -0.53
ACTN1-220ENST00000556433 NDUFV3P56181 108 aaKnown RBP11.74□□□□□ -0.53
ACTN1-220ENST00000556433 TEN1Q86WV5 123 aa11.73□□□□□ -0.53
ACTN1-220ENST00000556433 FAM218AQ96MZ4 157 aa11.73□□□□□ -0.53
ACTN1-220ENST00000556433 HIGD1BQ9P298 99 aa11.72□□□□□ -0.53
ACTN1-220ENST00000556433 A0A0B4J2C4 111 aa11.71□□□□□ -0.53
ACTN1-220ENST00000556433 PAM16Q9Y3D7 125 aa11.69□□□□□ -0.54
ACTN1-220ENST00000556433 A0A087WSZ3 146 aa11.68□□□□□ -0.54
ACTN1-220ENST00000556433 SPATA45Q537H7 98 aa11.68□□□□□ -0.54
ACTN1-220ENST00000556433 H3BMG7 143 aa11.67□□□□□ -0.54
ACTN1-220ENST00000556433 C20orf166-AS1Q96NR2 134 aa11.67□□□□□ -0.54
ACTN1-220ENST00000556433 FABP2P12104 132 aa11.65□□□□□ -0.54
ACTN1-220ENST00000556433 C2orf91Q6ZV80 131 aa11.65□□□□□ -0.54
ACTN1-220ENST00000556433 A8MUU9 505 aa11.64□□□□□ -0.55
ACTN1-220ENST00000556433 GHRHP01286 108 aa11.64□□□□□ -0.55
ACTN1-220ENST00000556433 A0A1B0GX51 115 aa11.63□□□□□ -0.55
ACTN1-220ENST00000556433 CEND1Q8N111 149 aa11.62□□□□□ -0.55
ACTN1-220ENST00000556433 PRO1854Q9UHT4 67 aa11.62□□□□□ -0.55
ACTN1-220ENST00000556433 VAMP8Q9BV40 100 aa11.61□□□□□ -0.55
ACTN1-220ENST00000556433 DSCR10P59022 87 aa11.59□□□□□ -0.55
ACTN1-220ENST00000556433 TMEM238LA0A1B0GVL6 79 aa11.58□□□□□ -0.56
ACTN1-220ENST00000556433 A6NJY4 79 aa11.58□□□□□ -0.56
ACTN1-220ENST00000556433 A0A1W2PNM2 257 aa11.57□□□□□ -0.56
ACTN1-220ENST00000556433 TRBV20-1A0A075B6N2 111 aa11.56□□□□□ -0.56
ACTN1-220ENST00000556433 SIGMAR1Q99720 223 aa11.55□□□□□ -0.56
ACTN1-220ENST00000556433 TRIAP1O43715 76 aa11.54□□□□□ -0.56
ACTN1-220ENST00000556433 FXYD2P54710 66 aa11.54□□□□□ -0.56
ACTN1-220ENST00000556433 ANKRD29Q8N6D5 301 aa11.52□□□□□ -0.57
ACTN1-220ENST00000556433 LINC00313P59037 77 aa11.51□□□□□ -0.57
ACTN1-220ENST00000556433 IGKV4-1P06312 121 aa11.49□□□□□ -0.57
ACTN1-220ENST00000556433 A0A1B0GV72 72 aa11.48□□□□□ -0.57
ACTN1-220ENST00000556433 DNAL4O96015 105 aa11.48□□□□□ -0.57
ACTN1-220ENST00000556433 ORMDL1Q9P0S3 153 aa11.48□□□□□ -0.57
ACTN1-220ENST00000556433 TRBV7-4A0A0J9YYF1 115 aa11.47□□□□□ -0.57
ACTN1-220ENST00000556433 PSMB2P49721 201 aa11.46□□□□□ -0.57
ACTN1-220ENST00000556433 H3BQ85 93 aa11.45□□□□□ -0.58
ACTN1-220ENST00000556433 KRTAP9-8Q9BYQ0 159 aa11.45□□□□□ -0.58
ACTN1-220ENST00000556433 KRTAP16-1A8MUX0 517 aa11.44□□□□□ -0.58
ACTN1-220ENST00000556433 TMEM256-PLSCR3K7ERE1 68 aa11.42□□□□□ -0.58
ACTN1-220ENST00000556433 DEFB116Q30KQ4 102 aa11.42□□□□□ -0.58
ACTN1-220ENST00000556433 K7ERJ3 54 aa11.41□□□□□ -0.58
ACTN1-220ENST00000556433 HSD52Q0P140 79 aa11.41□□□□□ -0.58
ACTN1-220ENST00000556433 NOTCH2NLQ7Z3S9 236 aa11.41□□□□□ -0.58
ACTN1-220ENST00000556433 COX6CP09669 75 aa11.4□□□□□ -0.58
ACTN1-220ENST00000556433 CCKP06307 115 aa11.39□□□□□ -0.59
ACTN1-220ENST00000556433 LINC00472Q9H8W2 130 aa11.39□□□□□ -0.59
ACTN1-220ENST00000556433 FAM236DA0A1B0GTK5 79 aa11.38□□□□□ -0.59
ACTN1-220ENST00000556433 FAM236CP0DP71 79 aa11.38□□□□□ -0.59
ACTN1-220ENST00000556433 TRACP01848 142 aa11.37□□□□□ -0.59
ACTN1-220ENST00000556433 IGHV6-1A0A0B4J1U7 121 aa11.35□□□□□ -0.59
ACTN1-220ENST00000556433 KRTAP9-7A8MTY7 169 aa11.34□□□□□ -0.59
ACTN1-220ENST00000556433 UBE2V1Q13404 147 aa11.34□□□□□ -0.59
ACTN1-220ENST00000556433 PYY3Q5JQD4 70 aa11.33□□□□□ -0.6
ACTN1-220ENST00000556433 RBM12B-AS1Q9P1G2 102 aa11.32□□□□□ -0.6
ACTN1-220ENST00000556433 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.31□□□□□ -0.6
ACTN1-220ENST00000556433 USH2AO75445 5202 aa11.3□□□□□ -0.6
ACTN1-220ENST00000556433 HRES1P13985 223 aa11.3□□□□□ -0.6
ACTN1-220ENST00000556433 MPLKIPQ8TAP9 179 aa11.29□□□□□ -0.6
ACTN1-220ENST00000556433 VPS25Q9BRG1 176 aa11.29□□□□□ -0.6
ACTN1-220ENST00000556433 MT2AP02795 61 aa11.26□□□□□ -0.61
ACTN1-220ENST00000556433 SCGB1C2P0DMR2 95 aa11.26□□□□□ -0.61
ACTN1-220ENST00000556433 RBM3P98179 157 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms