RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 CFC1P0CG37 223 aa7.64□□□□□ -1.19
SNX6-203ENST00000555416 HIGD1BQ9P298 99 aa7.64□□□□□ -1.19
SNX6-203ENST00000555416 H7C2G1 150 aa7.62□□□□□ -1.19
SNX6-203ENST00000555416 VAMP3Q15836 100 aa7.62□□□□□ -1.19
SNX6-203ENST00000555416 Q6ZQY7 126 aa7.61□□□□□ -1.19
SNX6-203ENST00000555416 NHP2Q9NX24 153 aaKnown RBP7.61□□□□□ -1.19
SNX6-203ENST00000555416 hADV29S1A0JD25 119 aa7.6□□□□□ -1.19
SNX6-203ENST00000555416 PRO1933Q9H354 126 aa7.6□□□□□ -1.19
SNX6-203ENST00000555416 FXYD2P54710 66 aa7.58□□□□□ -1.2
SNX6-203ENST00000555416 CEND1Q8N111 149 aa7.58□□□□□ -1.2
SNX6-203ENST00000555416 MUC17Q685J3 4493 aa7.57□□□□□ -1.2
SNX6-203ENST00000555416 A0A0B4J2C4 111 aa7.57□□□□□ -1.2
SNX6-203ENST00000555416 CD164Q04900 197 aa7.57□□□□□ -1.2
SNX6-203ENST00000555416 RAB37Q96AX2 223 aa7.57□□□□□ -1.2
SNX6-203ENST00000555416 BVES-AS1Q5T3Y7 98 aa7.55□□□□□ -1.2
SNX6-203ENST00000555416 FAM218AQ96MZ4 157 aa7.55□□□□□ -1.2
SNX6-203ENST00000555416 LIMD2Q9BT23 127 aa7.55□□□□□ -1.2
SNX6-203ENST00000555416 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.54□□□□□ -1.2
SNX6-203ENST00000555416 C1orf195Q5TG92 126 aa7.52□□□□□ -1.21
SNX6-203ENST00000555416 Q5XG85 94 aa7.52□□□□□ -1.21
SNX6-203ENST00000555416 KRTAP4-1Q9BYQ7 146 aa7.52□□□□□ -1.21
SNX6-203ENST00000555416 IGLV8-61A0A075B6I0 122 aa7.51□□□□□ -1.21
SNX6-203ENST00000555416 ASB16-AS1Q495Z4 193 aa7.51□□□□□ -1.21
SNX6-203ENST00000555416 IGFL1Q6UW32 110 aa7.51□□□□□ -1.21
SNX6-203ENST00000555416 KRTAP4-8Q9BYQ9 185 aa7.51□□□□□ -1.21
SNX6-203ENST00000555416 PRO1854Q9UHT4 67 aa7.51□□□□□ -1.21
SNX6-203ENST00000555416 F8WEM9 126 aa7.5□□□□□ -1.21
SNX6-203ENST00000555416 OCIAD2Q56VL3 154 aa7.5□□□□□ -1.21
SNX6-203ENST00000555416 H3BUT2 72 aa7.49□□□□□ -1.21
SNX6-203ENST00000555416 K7ERJ3 54 aa7.49□□□□□ -1.21
SNX6-203ENST00000555416 HSD52Q0P140 79 aa7.49□□□□□ -1.21
SNX6-203ENST00000555416 TMEM238LA0A1B0GVL6 79 aa7.48□□□□□ -1.21
SNX6-203ENST00000555416 C9orf92A6NGG3 77 aa7.48□□□□□ -1.21
SNX6-203ENST00000555416 H0YGX0 51 aa7.48□□□□□ -1.21
SNX6-203ENST00000555416 TRIAP1O43715 76 aa7.48□□□□□ -1.21
SNX6-203ENST00000555416 SNHG12Q9BXW3 62 aa7.47□□□□□ -1.21
SNX6-203ENST00000555416 FAT4Q6V0I7 4981 aa7.47□□□□□ -1.21
SNX6-203ENST00000555416 Q6JHZ5 121 aa7.46□□□□□ -1.22
SNX6-203ENST00000555416 PPDPFLQ8WWR9 84 aa7.46□□□□□ -1.22
SNX6-203ENST00000555416 CLEC2BQ92478 149 aa7.46□□□□□ -1.22
SNX6-203ENST00000555416 UQCR10Q9UDW1 63 aa7.46□□□□□ -1.22
SNX6-203ENST00000555416 TRBV7-7A0A0K0K1E9 115 aa7.44□□□□□ -1.22
SNX6-203ENST00000555416 SEC61BP60468 96 aaKnown RBP7.44□□□□□ -1.22
SNX6-203ENST00000555416 NDUFV3P56181 108 aaKnown RBP7.42□□□□□ -1.22
SNX6-203ENST00000555416 A0A0U1RQV1 116 aa7.41□□□□□ -1.22
SNX6-203ENST00000555416 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.41□□□□□ -1.22
SNX6-203ENST00000555416 TCL1BO95988 128 aa7.41□□□□□ -1.22
SNX6-203ENST00000555416 A0A1B0GX51 115 aa7.4□□□□□ -1.22
SNX6-203ENST00000555416 SNCGO76070 127 aa7.39□□□□□ -1.23
SNX6-203ENST00000555416 PSMB2P49721 201 aa7.39□□□□□ -1.23
SNX6-203ENST00000555416 FABP2P12104 132 aa7.38□□□□□ -1.23
SNX6-203ENST00000555416 PCOTHQ58A44 107 aa7.38□□□□□ -1.23
SNX6-203ENST00000555416 KRTAP9-2Q9BYQ4 174 aa7.38□□□□□ -1.23
SNX6-203ENST00000555416 H3BMG7 143 aa7.36□□□□□ -1.23
SNX6-203ENST00000555416 Q6Q795 121 aa7.35□□□□□ -1.23
SNX6-203ENST00000555416 KRTAP9-6A0A140TA67 174 aa7.34□□□□□ -1.23
SNX6-203ENST00000555416 A0A1B0GV72 72 aa7.34□□□□□ -1.23
SNX6-203ENST00000555416 A0A1W2PNM2 257 aa7.33□□□□□ -1.24
SNX6-203ENST00000555416 TEN1Q86WV5 123 aa7.33□□□□□ -1.24
SNX6-203ENST00000555416 ORMDL1Q9P0S3 153 aa7.32□□□□□ -1.24
SNX6-203ENST00000555416 A0A087WSZ3 146 aa7.31□□□□□ -1.24
SNX6-203ENST00000555416 LST1O00453 97 aa7.31□□□□□ -1.24
SNX6-203ENST00000555416 DNAL4O96015 105 aa7.31□□□□□ -1.24
SNX6-203ENST00000555416 COX6CP09669 75 aa7.31□□□□□ -1.24
SNX6-203ENST00000555416 RPL37P61927 97 aaKnown RBP7.31□□□□□ -1.24
SNX6-203ENST00000555416 SMIM6P0DI80 62 aa7.3□□□□□ -1.24
SNX6-203ENST00000555416 KRTAP19-2Q3LHN2 52 aa7.3□□□□□ -1.24
SNX6-203ENST00000555416 Q96NJ1 140 aa7.3□□□□□ -1.24
SNX6-203ENST00000555416 NAA38Q9BRA0 125 aaKnown RBP7.29□□□□□ -1.24
SNX6-203ENST00000555416 TRACP01848 142 aa7.28□□□□□ -1.24
SNX6-203ENST00000555416 OBSCN-AS1Q96MR7 158 aa7.28□□□□□ -1.24
SNX6-203ENST00000555416 LOC105371267A0A1B0GV96 52 aa7.27□□□□□ -1.25
SNX6-203ENST00000555416 TMEM256-PLSCR3K7ERE1 68 aa7.27□□□□□ -1.25
SNX6-203ENST00000555416 SCGB1C2P0DMR2 95 aa7.27□□□□□ -1.25
SNX6-203ENST00000555416 ANKRD29Q8N6D5 301 aa7.26□□□□□ -1.25
SNX6-203ENST00000555416 SS18L2Q9UHA2 77 aa7.26□□□□□ -1.25
SNX6-203ENST00000555416 UBE2V1Q13404 147 aa7.25□□□□□ -1.25
SNX6-203ENST00000555416 H3BQ85 93 aa7.24□□□□□ -1.25
SNX6-203ENST00000555416 M0R143 59 aa7.24□□□□□ -1.25
SNX6-203ENST00000555416 TRBV7-4A0A0J9YYF1 115 aa7.23□□□□□ -1.25
SNX6-203ENST00000555416 CCKP06307 115 aa7.21□□□□□ -1.26
SNX6-203ENST00000555416 BAALC-AS2P0C853 105 aa7.21□□□□□ -1.26
SNX6-203ENST00000555416 Q75L30 129 aa7.2□□□□□ -1.26
SNX6-203ENST00000555416 DSCR10P59022 87 aa7.19□□□□□ -1.26
SNX6-203ENST00000555416 DEFB116Q30KQ4 102 aa7.19□□□□□ -1.26
SNX6-203ENST00000555416 LINC00472Q9H8W2 130 aa7.18□□□□□ -1.26
SNX6-203ENST00000555416 TSTD3H0UI37 97 aa7.17□□□□□ -1.26
SNX6-203ENST00000555416 RBM3P98179 157 aaKnown RBP7.17□□□□□ -1.26
SNX6-203ENST00000555416 BATFQ16520 125 aa7.17□□□□□ -1.26
SNX6-203ENST00000555416 SIGMAR1Q99720 223 aa7.17□□□□□ -1.26
SNX6-203ENST00000555416 IGKV4-1P06312 121 aa7.16□□□□□ -1.26
SNX6-203ENST00000555416 MT1HP80294 61 aa7.16□□□□□ -1.26
SNX6-203ENST00000555416 ATXN8Q156A1 80 aa7.16□□□□□ -1.26
SNX6-203ENST00000555416 NOTCH2NLQ7Z3S9 236 aa7.16□□□□□ -1.26
SNX6-203ENST00000555416 C20orf166-AS1Q96NR2 134 aa7.16□□□□□ -1.26
SNX6-203ENST00000555416 VPS25Q9BRG1 176 aa7.16□□□□□ -1.26
SNX6-203ENST00000555416 A8MUU9 505 aa7.15□□□□□ -1.26
SNX6-203ENST00000555416 KRTAP16-1A8MUX0 517 aa7.13□□□□□ -1.27
SNX6-203ENST00000555416 ATP11AUNQ6ZP68 121 aa7.13□□□□□ -1.27
SNX6-203ENST00000555416 DSCR8Q96T75 97 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms