RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 FP248Q71RG6 208 aaPredicted RBP6.91□□□□□ -1.3
SRP54-206ENST00000555317 PRO1933Q9H354 126 aa6.9□□□□□ -1.3
SRP54-206ENST00000555317 RNF213Q63HN8 5207 aa6.9□□□□□ -1.31
SRP54-206ENST00000555317 HRCT1Q6UXD1 115 aa6.89□□□□□ -1.31
SRP54-206ENST00000555317 Q6ZQY7 126 aa6.89□□□□□ -1.31
SRP54-206ENST00000555317 LIMD2Q9BT23 127 aa6.89□□□□□ -1.31
SRP54-206ENST00000555317 CDIP1Q9H305 208 aa6.89□□□□□ -1.31
SRP54-206ENST00000555317 LINC01547P58512 204 aaPredicted RBP6.88□□□□□ -1.31
SRP54-206ENST00000555317 HSD52Q0P140 79 aa6.88□□□□□ -1.31
SRP54-206ENST00000555317 TPRXLQ17RH7 258 aa6.88□□□□□ -1.31
SRP54-206ENST00000555317 UQCR10Q9UDW1 63 aa6.88□□□□□ -1.31
SRP54-206ENST00000555317 Q8N377 158 aa6.87□□□□□ -1.31
SRP54-206ENST00000555317 PRO1854Q9UHT4 67 aa6.87□□□□□ -1.31
SRP54-206ENST00000555317 H0YGX0 51 aa6.86□□□□□ -1.31
SRP54-206ENST00000555317 FXYD2P54710 66 aa6.86□□□□□ -1.31
SRP54-206ENST00000555317 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.86□□□□□ -1.31
SRP54-206ENST00000555317 SMIM29Q86T20 159 aa6.86□□□□□ -1.31
SRP54-206ENST00000555317 CD164Q04900 197 aa6.85□□□□□ -1.31
SRP54-206ENST00000555317 PPDPFLQ8WWR9 84 aa6.84□□□□□ -1.31
SRP54-206ENST00000555317 SNHG12Q9BXW3 62 aa6.84□□□□□ -1.31
SRP54-206ENST00000555317 OCIAD2Q56VL3 154 aa6.82□□□□□ -1.32
SRP54-206ENST00000555317 GHRHP01286 108 aa6.81□□□□□ -1.32
SRP54-206ENST00000555317 PSMB2P49721 201 aa6.81□□□□□ -1.32
SRP54-206ENST00000555317 Q6JHZ5 121 aa6.81□□□□□ -1.32
SRP54-206ENST00000555317 K7ERJ3 54 aa6.79□□□□□ -1.32
SRP54-206ENST00000555317 TRIAP1O43715 76 aa6.79□□□□□ -1.32
SRP54-206ENST00000555317 COX6CP09669 75 aa6.79□□□□□ -1.32
SRP54-206ENST00000555317 KRTAP13-3Q3SY46 172 aa6.79□□□□□ -1.32
SRP54-206ENST00000555317 CLEC2BQ92478 149 aa6.79□□□□□ -1.32
SRP54-206ENST00000555317 A0A0G2JQZ4 141 aa6.78□□□□□ -1.32
SRP54-206ENST00000555317 A0A1B0GX51 115 aa6.78□□□□□ -1.32
SRP54-206ENST00000555317 TCL1BO95988 128 aa6.78□□□□□ -1.32
SRP54-206ENST00000555317 DNAL4O96015 105 aa6.78□□□□□ -1.32
SRP54-206ENST00000555317 SMIM6P0DI80 62 aa6.78□□□□□ -1.32
SRP54-206ENST00000555317 FAM218AQ96MZ4 157 aa6.78□□□□□ -1.32
SRP54-206ENST00000555317 IGLV8-61A0A075B6I0 122 aa6.76□□□□□ -1.33
SRP54-206ENST00000555317 Q5XG85 94 aa6.76□□□□□ -1.33
SRP54-206ENST00000555317 FABP2P12104 132 aa6.75□□□□□ -1.33
SRP54-206ENST00000555317 IGFL1Q6UW32 110 aa6.75□□□□□ -1.33
SRP54-206ENST00000555317 H3BUT2 72 aa6.74□□□□□ -1.33
SRP54-206ENST00000555317 A0A0U1RQV1 116 aa6.73□□□□□ -1.33
SRP54-206ENST00000555317 M0R143 59 aa6.73□□□□□ -1.33
SRP54-206ENST00000555317 SCGB1C2P0DMR2 95 aa6.73□□□□□ -1.33
SRP54-206ENST00000555317 NDUFV3P56181 108 aaKnown RBP6.73□□□□□ -1.33
SRP54-206ENST00000555317 TRBV7-7A0A0K0K1E9 115 aa6.72□□□□□ -1.33
SRP54-206ENST00000555317 H3BQ85 93 aa6.72□□□□□ -1.33
SRP54-206ENST00000555317 ORMDL1Q9P0S3 153 aa6.72□□□□□ -1.33
SRP54-206ENST00000555317 C1orf195Q5TG92 126 aa6.71□□□□□ -1.34
SRP54-206ENST00000555317 MUC2Q02817 5179 aa6.7□□□□□ -1.34
SRP54-206ENST00000555317 TSTD3H0UI37 97 aa6.7□□□□□ -1.34
SRP54-206ENST00000555317 H3BMG7 143 aa6.7□□□□□ -1.34
SRP54-206ENST00000555317 SEC61BP60468 96 aaKnown RBP6.7□□□□□ -1.34
SRP54-206ENST00000555317 C9orf92A6NGG3 77 aa6.69□□□□□ -1.34
SRP54-206ENST00000555317 XP32Q5T750 250 aa6.68□□□□□ -1.34
SRP54-206ENST00000555317 SS18L2Q9UHA2 77 aa6.68□□□□□ -1.34
SRP54-206ENST00000555317 TMEM256-PLSCR3K7ERE1 68 aa6.67□□□□□ -1.34
SRP54-206ENST00000555317 ASB16-AS1Q495Z4 193 aa6.67□□□□□ -1.34
SRP54-206ENST00000555317 TEN1Q86WV5 123 aa6.67□□□□□ -1.34
SRP54-206ENST00000555317 TRACP01848 142 aa6.66□□□□□ -1.34
SRP54-206ENST00000555317 A0A1B0GV72 72 aa6.65□□□□□ -1.34
SRP54-206ENST00000555317 LST1O00453 97 aa6.65□□□□□ -1.34
SRP54-206ENST00000555317 Q6Q795 121 aa6.65□□□□□ -1.34
SRP54-206ENST00000555317 MUC17Q685J3 4493 aa6.64□□□□□ -1.35
SRP54-206ENST00000555317 ANKRD29Q8N6D5 301 aa6.64□□□□□ -1.35
SRP54-206ENST00000555317 BATFQ16520 125 aa6.63□□□□□ -1.35
SRP54-206ENST00000555317 A0A087WSZ3 146 aa6.62□□□□□ -1.35
SRP54-206ENST00000555317 LOC105371267A0A1B0GV96 52 aa6.62□□□□□ -1.35
SRP54-206ENST00000555317 UBE2V1Q13404 147 aa6.62□□□□□ -1.35
SRP54-206ENST00000555317 ATXN8Q156A1 80 aa6.61□□□□□ -1.35
SRP54-206ENST00000555317 LYRM7Q5U5X0 104 aa6.61□□□□□ -1.35
SRP54-206ENST00000555317 NAA38Q9BRA0 125 aaKnown RBP6.6□□□□□ -1.35
SRP54-206ENST00000555317 TRBV7-4A0A0J9YYF1 115 aa6.58□□□□□ -1.36
SRP54-206ENST00000555317 CCKP06307 115 aa6.58□□□□□ -1.36
SRP54-206ENST00000555317 BAALC-AS2P0C853 105 aa6.58□□□□□ -1.36
SRP54-206ENST00000555317 A0A1W2PNM2 257 aa6.57□□□□□ -1.36
SRP54-206ENST00000555317 RBM3P98179 157 aaKnown RBP6.57□□□□□ -1.36
SRP54-206ENST00000555317 DSCR8Q96T75 97 aa6.57□□□□□ -1.36
SRP54-206ENST00000555317 VPS25Q9BRG1 176 aa6.57□□□□□ -1.36
SRP54-206ENST00000555317 PCOTHQ58A44 107 aa6.56□□□□□ -1.36
SRP54-206ENST00000555317 SIGMAR1Q99720 223 aa6.56□□□□□ -1.36
SRP54-206ENST00000555317 OBSCN-AS1Q96MR7 158 aa6.55□□□□□ -1.36
SRP54-206ENST00000555317 TRBV20-1A0A075B6N2 111 aa6.53□□□□□ -1.36
SRP54-206ENST00000555317 C9JAW5 83 aa6.53□□□□□ -1.36
SRP54-206ENST00000555317 RPL37P61927 97 aaKnown RBP6.53□□□□□ -1.36
SRP54-206ENST00000555317 FAT4Q6V0I7 4981 aa6.51□□□□□ -1.37
SRP54-206ENST00000555317 JMJD7-PLA2G4BH0Y9G9 81 aa6.51□□□□□ -1.37
SRP54-206ENST00000555317 C21orf62-AS1Q17RA5 79 aa6.51□□□□□ -1.37
SRP54-206ENST00000555317 C9orf118A6NHY6 69 aa6.5□□□□□ -1.37
SRP54-206ENST00000555317 IGKV4-1P06312 121 aa6.5□□□□□ -1.37
SRP54-206ENST00000555317 Q96NJ1 140 aa6.5□□□□□ -1.37
SRP54-206ENST00000555317 KRTAP4-1Q9BYQ7 146 aa6.5□□□□□ -1.37
SRP54-206ENST00000555317 KRTAP4-8Q9BYQ9 185 aa6.49□□□□□ -1.37
SRP54-206ENST00000555317 ATP11AUNQ6ZP68 121 aa6.48□□□□□ -1.37
SRP54-206ENST00000555317 PDE6GP18545 87 aa6.47□□□□□ -1.37
SRP54-206ENST00000555317 Q75L30 129 aa6.47□□□□□ -1.37
SRP54-206ENST00000555317 A0A1W2PPM0 123 aa6.46□□□□□ -1.38
SRP54-206ENST00000555317 TAX1BP3O14907 124 aa6.46□□□□□ -1.38
SRP54-206ENST00000555317 LOC110117498A0A087WWA1 95 aa6.45□□□□□ -1.38
SRP54-206ENST00000555317 DSCR10P59022 87 aa6.45□□□□□ -1.38
SRP54-206ENST00000555317 DEFB116Q30KQ4 102 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms