RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 H1FX-AS1Q4G0G2 97 aa0.13□□□□□ -2.39
LSM6P2-201ENST00000552208 BRCA2P51587 3418 aa0.13□□□□□ -2.39
LSM6P2-201ENST00000552208 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.13□□□□□ -2.39
LSM6P2-201ENST00000552208 LAMA5O15230 3695 aa0.12□□□□□ -2.39
LSM6P2-201ENST00000552208 SPTBN5Q9NRC6 3674 aaKnown RBP0.12□□□□□ -2.39
LSM6P2-201ENST00000552208 CENPEQ02224 2701 aa0.12□□□□□ -2.39
LSM6P2-201ENST00000552208 CLIP1P30622 1438 aa0.12□□□□□ -2.39
LSM6P2-201ENST00000552208 DCHS2Q6V1P9 2916 aa0.11□□□□□ -2.39
LSM6P2-201ENST00000552208 FREM2Q5SZK8 3169 aa0.11□□□□□ -2.39
LSM6P2-201ENST00000552208 ARHGAP35Q9NRY4 1499 aa0.11□□□□□ -2.39
LSM6P2-201ENST00000552208 CFAP54Q96N23 3096 aa0.11□□□□□ -2.39
LSM6P2-201ENST00000552208 QSER1Q2KHR3 1735 aa0.11□□□□□ -2.39
LSM6P2-201ENST00000552208 ASPMQ8IZT6 3477 aa0.11□□□□□ -2.39
LSM6P2-201ENST00000552208 SPRR2DP22532 72 aa0.11□□□□□ -2.39
LSM6P2-201ENST00000552208 CSPG4Q6UVK1 2322 aa0.11□□□□□ -2.39
LSM6P2-201ENST00000552208 SVEP1Q4LDE5 3571 aa0.11□□□□□ -2.39
LSM6P2-201ENST00000552208 DIP2BQ9P265 1576 aa0.11□□□□□ -2.39
LSM6P2-201ENST00000552208 LRP2P98164 4655 aa0.1□□□□□ -2.39
LSM6P2-201ENST00000552208 CENPFP49454 3210 aa0.1□□□□□ -2.39
LSM6P2-201ENST00000552208 NBASA2RRP1 2371 aa0.1□□□□□ -2.39
LSM6P2-201ENST00000552208 RGPD2P0DJD1 1756 aa0.1□□□□□ -2.39
LSM6P2-201ENST00000552208 TRAV21A0A0B4J279 112 aa0.1□□□□□ -2.39
LSM6P2-201ENST00000552208 KANTRA0A1W2PQU2 76 aa0.1□□□□□ -2.39
LSM6P2-201ENST00000552208 CCL22O00626 93 aa0.1□□□□□ -2.39
LSM6P2-201ENST00000552208 KRTAP19-6Q3LI70 58 aa0.1□□□□□ -2.39
LSM6P2-201ENST00000552208 LELP1Q5T871 98 aa0.1□□□□□ -2.39
LSM6P2-201ENST00000552208 GAFA1Q96PS6 74 aa0.1□□□□□ -2.39
LSM6P2-201ENST00000552208 ST20Q9HBF5 79 aa0.1□□□□□ -2.39
LSM6P2-201ENST00000552208 CUBNO60494 3623 aa0.1□□□□□ -2.39
LSM6P2-201ENST00000552208 MGAQ8IWI9 3026 aa0.1□□□□□ -2.39
LSM6P2-201ENST00000552208 ERVK-7P63135 1459 aa0.1□□□□□ -2.39
LSM6P2-201ENST00000552208 CEP170BQ9Y4F5 1589 aaPredicted RBP0.08□□□□□ -2.4
LSM6P2-201ENST00000552208 MYO15AQ9UKN7 3530 aa0.08□□□□□ -2.4
LSM6P2-201ENST00000552208 LOC400499M0QZD8 3231 aa0.08□□□□□ -2.4
LSM6P2-201ENST00000552208 DMXL1Q9Y485 3027 aa0.08□□□□□ -2.4
LSM6P2-201ENST00000552208 NBPF19A0A087WUL8 3843 aa0.07□□□□□ -2.4
LSM6P2-201ENST00000552208 USP34Q70CQ2 3546 aa0.07□□□□□ -2.4
LSM6P2-201ENST00000552208 ADGRG4Q8IZF6 3080 aa0.07□□□□□ -2.4
LSM6P2-201ENST00000552208 S100A13Q99584 98 aa0.07□□□□□ -2.4
LSM6P2-201ENST00000552208 KIF20BQ96Q89 1820 aa0.07□□□□□ -2.4
LSM6P2-201ENST00000552208 TACC2O95359 2948 aa0.07□□□□□ -2.4
LSM6P2-201ENST00000552208 ZNF831Q5JPB2 1677 aa0.07□□□□□ -2.4
LSM6P2-201ENST00000552208 URB2Q14146 1524 aaKnown RBP0.07□□□□□ -2.4
LSM6P2-201ENST00000552208 DCAF1Q9Y4B6 1507 aa0.07□□□□□ -2.4
LSM6P2-201ENST00000552208 SCRIBQ14160 1630 aa0.06□□□□□ -2.4
LSM6P2-201ENST00000552208 NCOA2Q15596 1464 aa0.06□□□□□ -2.4
LSM6P2-201ENST00000552208 MT4P47944 62 aa0.06□□□□□ -2.4
LSM6P2-201ENST00000552208 ADIRFQ15847 76 aa0.06□□□□□ -2.4
LSM6P2-201ENST00000552208 HTTP42858 3142 aa0.06□□□□□ -2.4
LSM6P2-201ENST00000552208 CSMD2Q7Z408 3487 aa0.06□□□□□ -2.4
LSM6P2-201ENST00000552208 PREX1Q8TCU6 1659 aa0.05□□□□□ -2.4
LSM6P2-201ENST00000552208 WDFY3Q8IZQ1 3526 aa0.05□□□□□ -2.4
LSM6P2-201ENST00000552208 FRYLO94915 3013 aa0.05□□□□□ -2.4
LSM6P2-201ENST00000552208 SUPT6HQ7KZ85 1726 aaKnown RBP0.04□□□□□ -2.4
LSM6P2-201ENST00000552208 MAGI3Q5TCQ9 1506 aa0.04□□□□□ -2.4
LSM6P2-201ENST00000552208 UTRNP46939 3433 aa0.04□□□□□ -2.4
LSM6P2-201ENST00000552208 DEFB121Q5J5C9 76 aa0.04□□□□□ -2.4
LSM6P2-201ENST00000552208 DNAH14Q0VDD8 3507 aa0.04□□□□□ -2.4
LSM6P2-201ENST00000552208 KDM5DQ9BY66 1539 aa0.03□□□□□ -2.4
LSM6P2-201ENST00000552208 LRP1BQ9NZR2 4599 aa0.03□□□□□ -2.4
LSM6P2-201ENST00000552208 NDUFB1O75438 58 aa0.03□□□□□ -2.4
LSM6P2-201ENST00000552208 WFDC9Q8NEX5 89 aa0.03□□□□□ -2.4
LSM6P2-201ENST00000552208 POLR1AO95602 1720 aaPredicted RBP0.03□□□□□ -2.4
LSM6P2-201ENST00000552208 COL14A1Q05707 1796 aaKnown RBP0.02□□□□□ -2.41
LSM6P2-201ENST00000552208 BCORQ6W2J9 1755 aa0.02□□□□□ -2.41
LSM6P2-201ENST00000552208 VPS13AQ96RL7 3174 aa0.02□□□□□ -2.41
LSM6P2-201ENST00000552208 RPL38P63173 70 aaKnown RBP0.02□□□□□ -2.41
LSM6P2-201ENST00000552208 BVES-AS1Q5T3Y7 98 aa0.02□□□□□ -2.41
LSM6P2-201ENST00000552208 CDKN2A-AS1Q9UH64 79 aa0.02□□□□□ -2.41
LSM6P2-201ENST00000552208 VPS13CQ709C8 3753 aa0.02□□□□□ -2.41
LSM6P2-201ENST00000552208 SPENQ96T58 3664 aaKnown RBP0.01□□□□□ -2.41
LSM6P2-201ENST00000552208 APC2O95996 2303 aa0.01□□□□□ -2.41
LSM6P2-201ENST00000552208 LOC730098B7Z3J9 87 aa0.01□□□□□ -2.41
LSM6P2-201ENST00000552208 H3BUT2 72 aa0.01□□□□□ -2.41
LSM6P2-201ENST00000552208 SPRR2EP22531 72 aa0.01□□□□□ -2.41
LSM6P2-201ENST00000552208 SPRR2BP35325 72 aa0.01□□□□□ -2.41
LSM6P2-201ENST00000552208 SPRR2AP35326 72 aa0.01□□□□□ -2.41
LSM6P2-201ENST00000552208 HEPN1Q6WQI6 88 aa0.01□□□□□ -2.41
LSM6P2-201ENST00000552208 COX6B2Q6YFQ2 88 aa0.01□□□□□ -2.41
LSM6P2-201ENST00000552208 PIK3C2BO00750 1634 aa0.01□□□□□ -2.41
LSM6P2-201ENST00000552208 CHD7Q9P2D1 2997 aa0□□□□□ -2.41
LSM6P2-201ENST00000552208 M0R2T5 61 aa0□□□□□ -2.41
LSM6P2-201ENST00000552208 UBR3Q6ZT12 1888 aa0□□□□□ -2.41
LSM6P2-201ENST00000552208 STARD9Q9P2P6 4700 aa0□□□□□ -2.41
LSM6P2-201ENST00000552208 PKHD1P08F94 4074 aa-0.01□□□□□ -2.41
LSM6P2-201ENST00000552208 CFAP74Q9C0B2 1584 aa-0.01□□□□□ -2.41
LSM6P2-201ENST00000552208 ABCC1P33527 1531 aa-0.01□□□□□ -2.41
LSM6P2-201ENST00000552208 FRYQ5TBA9 3013 aa-0.01□□□□□ -2.41
LSM6P2-201ENST00000552208 ATP5EP2Q5VTU8 51 aa-0.01□□□□□ -2.41
LSM6P2-201ENST00000552208 WFDC13Q8IUB5 93 aa-0.01□□□□□ -2.41
LSM6P2-201ENST00000552208 SPRR2GQ9BYE4 73 aa-0.01□□□□□ -2.41
LSM6P2-201ENST00000552208 RGPD8O14715 1765 aaPredicted RBP-0.01□□□□□ -2.41
LSM6P2-201ENST00000552208 RGPD5Q99666 1765 aa-0.01□□□□□ -2.41
LSM6P2-201ENST00000552208 DOT1LQ8TEK3 1739 aa-0.01□□□□□ -2.41
LSM6P2-201ENST00000552208 SMG1Q96Q15 3661 aaKnown RBP-0.02□□□□□ -2.41
LSM6P2-201ENST00000552208 LCE6AA0A183 80 aa-0.02□□□□□ -2.41
LSM6P2-201ENST00000552208 IFI6P09912 130 aa-0.02□□□□□ -2.41
LSM6P2-201ENST00000552208 CDH23Q9H251 3354 aa-0.02□□□□□ -2.41
LSM6P2-201ENST00000552208 XIRP2A4UGR9 3374 aa-0.03□□□□□ -2.41
LSM6P2-201ENST00000552208 RRBP1Q9P2E9 1410 aaKnown RBP-0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 218.8 ms