RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 REG3GQ6UW15 175 aa3.15□□□□□ -1.91
LSM3P2-201ENST00000551246 DNAH1Q9P2D7 4330 aa3.15□□□□□ -1.91
LSM3P2-201ENST00000551246 ANKRD11Q6UB99 2663 aaPredicted RBP3.14□□□□□ -1.91
LSM3P2-201ENST00000551246 ACYP2P14621 99 aa3.14□□□□□ -1.91
LSM3P2-201ENST00000551246 KRTAP25-1Q3LHN0 102 aa3.14□□□□□ -1.91
LSM3P2-201ENST00000551246 ACACAQ13085 2346 aa3.14□□□□□ -1.91
LSM3P2-201ENST00000551246 TLN1Q9Y490 2541 aaKnown RBP3.14□□□□□ -1.91
LSM3P2-201ENST00000551246 LOC400499M0QZD8 3231 aa3.13□□□□□ -1.91
LSM3P2-201ENST00000551246 UQCR11O14957 56 aa3.13□□□□□ -1.91
LSM3P2-201ENST00000551246 LINC01556Q5JQF7 62 aa3.13□□□□□ -1.91
LSM3P2-201ENST00000551246 MRPL34Q9BQ48 92 aaKnown RBP3.12□□□□□ -1.91
LSM3P2-201ENST00000551246 CSPG4Q6UVK1 2322 aa3.11□□□□□ -1.91
LSM3P2-201ENST00000551246 A0A1B0GU69 56 aa3.11□□□□□ -1.91
LSM3P2-201ENST00000551246 A0A1B0GVX0 72 aa3.11□□□□□ -1.91
LSM3P2-201ENST00000551246 SPART-AS1P0CW21 52 aa3.11□□□□□ -1.91
LSM3P2-201ENST00000551246 ZNF706Q9Y5V0 76 aaPredicted RBP3.11□□□□□ -1.91
LSM3P2-201ENST00000551246 MAP1AP78559 2803 aaPredicted RBP3.11□□□□□ -1.91
LSM3P2-201ENST00000551246 AKAP9Q99996 3911 aa3.11□□□□□ -1.91
LSM3P2-201ENST00000551246 A8MUU9 505 aa3.1□□□□□ -1.91
LSM3P2-201ENST00000551246 IGLV7-43P04211 117 aa3.1□□□□□ -1.91
LSM3P2-201ENST00000551246 P0C880 135 aa3.1□□□□□ -1.91
LSM3P2-201ENST00000551246 Q5W150 140 aa3.1□□□□□ -1.91
LSM3P2-201ENST00000551246 KRTAP2-2Q9BYT5 123 aa3.1□□□□□ -1.91
LSM3P2-201ENST00000551246 ITPR1Q14643 2758 aa3.09□□□□□ -1.91
LSM3P2-201ENST00000551246 NBPF19A0A087WUL8 3843 aa3.09□□□□□ -1.91
LSM3P2-201ENST00000551246 DNAH10OSP0CZ25 163 aa3.09□□□□□ -1.91
LSM3P2-201ENST00000551246 KRTAP13-1Q8IUC0 172 aa3.09□□□□□ -1.91
LSM3P2-201ENST00000551246 CHD6Q8TD26 2715 aa3.08□□□□□ -1.92
LSM3P2-201ENST00000551246 K7EIL1 84 aa3.08□□□□□ -1.92
LSM3P2-201ENST00000551246 CHTF8P0CG12 524 aa3.08□□□□□ -1.92
LSM3P2-201ENST00000551246 KRTAP10-9P60411 292 aa3.08□□□□□ -1.92
LSM3P2-201ENST00000551246 LRBAP50851 2863 aa3.08□□□□□ -1.92
LSM3P2-201ENST00000551246 ANK3Q12955 4377 aaKnown RBP3.07□□□□□ -1.92
LSM3P2-201ENST00000551246 DEFB4AO15263 64 aa3.07□□□□□ -1.92
LSM3P2-201ENST00000551246 CELSR1Q9NYQ6 3014 aa3.07□□□□□ -1.92
LSM3P2-201ENST00000551246 EYSQ5T1H1 3165 aa3.07□□□□□ -1.92
LSM3P2-201ENST00000551246 NBASA2RRP1 2371 aa3.06□□□□□ -1.92
LSM3P2-201ENST00000551246 PRLHP81277 87 aa3.06□□□□□ -1.92
LSM3P2-201ENST00000551246 KRTAP24-1Q3LI83 254 aa3.06□□□□□ -1.92
LSM3P2-201ENST00000551246 SVEP1Q4LDE5 3571 aa3.06□□□□□ -1.92
LSM3P2-201ENST00000551246 LINC00483Q53H64 154 aa3.06□□□□□ -1.92
LSM3P2-201ENST00000551246 SETXQ7Z333 2677 aaKnown RBP3.06□□□□□ -1.92
LSM3P2-201ENST00000551246 KRTAP11-1Q8IUC1 163 aa3.06□□□□□ -1.92
LSM3P2-201ENST00000551246 SPG11Q96JI7 2443 aa3.06□□□□□ -1.92
LSM3P2-201ENST00000551246 DEFB135Q30KP9 77 aa3.05□□□□□ -1.92
LSM3P2-201ENST00000551246 CASC10Q5T4H9 136 aa3.05□□□□□ -1.92
LSM3P2-201ENST00000551246 LINC00304Q8N9R0 145 aa3.05□□□□□ -1.92
LSM3P2-201ENST00000551246 HIVEP3Q5T1R4 2406 aa3.05□□□□□ -1.92
LSM3P2-201ENST00000551246 RELNP78509 3460 aa3.04□□□□□ -1.92
LSM3P2-201ENST00000551246 ASPMQ8IZT6 3477 aa3.04□□□□□ -1.92
LSM3P2-201ENST00000551246 MAPK1IP1LQ8NDC0 245 aa3.04□□□□□ -1.92
LSM3P2-201ENST00000551246 JMJD1CQ15652 2540 aa3.03□□□□□ -1.92
LSM3P2-201ENST00000551246 TLN2Q9Y4G6 2542 aa3.03□□□□□ -1.92
LSM3P2-201ENST00000551246 ATRXP46100 2492 aa3.03□□□□□ -1.92
LSM3P2-201ENST00000551246 GVINP1Q7Z2Y8 2422 aa3.03□□□□□ -1.92
LSM3P2-201ENST00000551246 DMXL1Q9Y485 3027 aa3.03□□□□□ -1.92
LSM3P2-201ENST00000551246 KRTAP10-3P60369 221 aa3.03□□□□□ -1.92
LSM3P2-201ENST00000551246 RIF1Q5UIP0 2472 aaKnown RBP3.03□□□□□ -1.92
LSM3P2-201ENST00000551246 BOD1L1Q8NFC6 3051 aa3.03□□□□□ -1.92
LSM3P2-201ENST00000551246 NCOR2Q9Y618 2525 aa3.02□□□□□ -1.93
LSM3P2-201ENST00000551246 FN1P02751 2386 aaKnown RBP3.02□□□□□ -1.93
LSM3P2-201ENST00000551246 HTN3P15516 51 aa3.02□□□□□ -1.93
LSM3P2-201ENST00000551246 DEFB123Q8N688 67 aa3.02□□□□□ -1.93
LSM3P2-201ENST00000551246 LAMA5O15230 3695 aa3.01□□□□□ -1.93
LSM3P2-201ENST00000551246 A0A096LNI7 61 aa3.01□□□□□ -1.93
LSM3P2-201ENST00000551246 LY6G6CO95867 125 aa3.01□□□□□ -1.93
LSM3P2-201ENST00000551246 ZFYVE26Q68DK2 2539 aa3.01□□□□□ -1.93
LSM3P2-201ENST00000551246 CELSR2Q9HCU4 2923 aa3.01□□□□□ -1.93
LSM3P2-201ENST00000551246 H0YAA0 97 aa3□□□□□ -1.93
LSM3P2-201ENST00000551246 PANO1I0J062 215 aa3□□□□□ -1.93
LSM3P2-201ENST00000551246 Q6ZSA8 131 aa3□□□□□ -1.93
LSM3P2-201ENST00000551246 ANKRD17O75179 2603 aaKnown RBP2.99□□□□□ -1.93
LSM3P2-201ENST00000551246 ASH1LQ9NR48 2969 aaKnown RBP2.99□□□□□ -1.93
LSM3P2-201ENST00000551246 KRTAP16-1A8MUX0 517 aa2.99□□□□□ -1.93
LSM3P2-201ENST00000551246 MT3P25713 68 aa2.99□□□□□ -1.93
LSM3P2-201ENST00000551246 ANAPC11Q9NYG5 84 aa2.99□□□□□ -1.93
LSM3P2-201ENST00000551246 KMT2BQ9UMN6 2715 aaPredicted RBP2.99□□□□□ -1.93
LSM3P2-201ENST00000551246 PTPN13Q12923 2485 aa2.98□□□□□ -1.93
LSM3P2-201ENST00000551246 CEP295Q9C0D2 2601 aa2.98□□□□□ -1.93
LSM3P2-201ENST00000551246 DEFB113Q30KQ7 82 aa2.98□□□□□ -1.93
LSM3P2-201ENST00000551246 APCP25054 2843 aa2.98□□□□□ -1.93
LSM3P2-201ENST00000551246 ZNF292O60281 2723 aa2.98□□□□□ -1.93
LSM3P2-201ENST00000551246 MYO9AB2RTY4 2548 aa2.97□□□□□ -1.93
LSM3P2-201ENST00000551246 COL12A1Q99715 3063 aa2.97□□□□□ -1.93
LSM3P2-201ENST00000551246 A0A087WTM6 91 aa2.97□□□□□ -1.93
LSM3P2-201ENST00000551246 BDP1A6H8Y1 2624 aa2.97□□□□□ -1.93
LSM3P2-201ENST00000551246 HIVEP2P31629 2446 aa2.97□□□□□ -1.93
LSM3P2-201ENST00000551246 NUPR2A6NF83 97 aa2.96□□□□□ -1.94
LSM3P2-201ENST00000551246 CDK2AP2O75956 126 aa2.96□□□□□ -1.94
LSM3P2-201ENST00000551246 DOPEY1Q5JWR5 2465 aa2.96□□□□□ -1.94
LSM3P2-201ENST00000551246 ATMQ13315 3056 aa2.96□□□□□ -1.94
LSM3P2-201ENST00000551246 USP9YO00507 2555 aaPredicted RBP2.96□□□□□ -1.94
LSM3P2-201ENST00000551246 TENM2Q9NT68 2774 aa2.95□□□□□ -1.94
LSM3P2-201ENST00000551246 MXRA5Q9NR99 2828 aa2.95□□□□□ -1.94
LSM3P2-201ENST00000551246 C20orf166-AS1Q96NR2 134 aa2.95□□□□□ -1.94
LSM3P2-201ENST00000551246 USP9XQ93008 2570 aaPredicted RBP2.95□□□□□ -1.94
LSM3P2-201ENST00000551246 SPTBN4Q9H254 2564 aa2.94□□□□□ -1.94
LSM3P2-201ENST00000551246 VPS13CQ709C8 3753 aa2.94□□□□□ -1.94
LSM3P2-201ENST00000551246 OTOGQ6ZRI0 2925 aa2.93□□□□□ -1.94
LSM3P2-201ENST00000551246 DNAH8Q96JB1 4490 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms