RNA–Protein interactions for RNA: ENST00000547530.6

BRF1-211, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRF1, Length 3,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-211ENST00000547530 LINC00588Q9Y4M8 146 aa9.72□□□□□ -0.85
BRF1-211ENST00000547530 IGLV1-50A0A075B6I6 118 aa9.72□□□□□ -0.85
BRF1-211ENST00000547530 IGLV9-49A0A0B4J1Y8 123 aa9.72□□□□□ -0.85
BRF1-211ENST00000547530 UBE2DNLQ8IWF7 75 aa9.72□□□□□ -0.85
BRF1-211ENST00000547530 ATP5EP56381 51 aaPredicted RBP9.71□□□□□ -0.85
BRF1-211ENST00000547530 IGFL1Q6UW32 110 aa9.7□□□□□ -0.86
BRF1-211ENST00000547530 PHF5AQ7RTV0 110 aaKnown RBP9.69□□□□□ -0.86
BRF1-211ENST00000547530 LINC01556Q5JQF7 62 aa9.69□□□□□ -0.86
BRF1-211ENST00000547530 TRAV22A0A0B4J277 110 aa9.68□□□□□ -0.86
BRF1-211ENST00000547530 PRR15LQ9BU68 103 aa9.68□□□□□ -0.86
BRF1-211ENST00000547530 hDV103S1A0JD37 113 aa9.67□□□□□ -0.86
BRF1-211ENST00000547530 IGLV5-48A0A075B6I7 105 aa9.67□□□□□ -0.86
BRF1-211ENST00000547530 H0Y9P7 68 aa9.67□□□□□ -0.86
BRF1-211ENST00000547530 PMAIP1Q13794 54 aa9.67□□□□□ -0.86
BRF1-211ENST00000547530 CASC2Q6XLA1 102 aa9.66□□□□□ -0.86
BRF1-211ENST00000547530 KRTAP7-1Q8IUC3 87 aa9.66□□□□□ -0.86
BRF1-211ENST00000547530 SPINK6Q6UWN8 80 aa9.63□□□□□ -0.87
BRF1-211ENST00000547530 ANAPC11Q9NYG5 84 aa9.62□□□□□ -0.87
BRF1-211ENST00000547530 SEC61GP60059 68 aa9.61□□□□□ -0.87
BRF1-211ENST00000547530 B9D2Q9BPU9 175 aa9.61□□□□□ -0.87
BRF1-211ENST00000547530 A6NED7 52 aa9.61□□□□□ -0.87
BRF1-211ENST00000547530 SPAG11AQ6PDA7 123 aa9.58□□□□□ -0.88
BRF1-211ENST00000547530 RETNLBQ9BQ08 111 aa9.58□□□□□ -0.88
BRF1-211ENST00000547530 IGHV6-1A0A0B4J1U7 121 aa9.56□□□□□ -0.88
BRF1-211ENST00000547530 DNAH10OSP0CZ25 163 aa9.55□□□□□ -0.88
BRF1-211ENST00000547530 KRTAP11-1Q8IUC1 163 aa9.55□□□□□ -0.88
BRF1-211ENST00000547530 KRTAP4-16G5E9R7 235 aaPredicted RBP9.52□□□□□ -0.88
BRF1-211ENST00000547530 KRTAP24-1Q3LI83 254 aa9.52□□□□□ -0.88
BRF1-211ENST00000547530 TNP2Q05952 138 aa9.52□□□□□ -0.89
BRF1-211ENST00000547530 KRTAP1-5Q9BYS1 174 aa9.52□□□□□ -0.89
BRF1-211ENST00000547530 SPRR4Q96PI1 79 aa9.5□□□□□ -0.89
BRF1-211ENST00000547530 NDUFB1O75438 58 aa9.5□□□□□ -0.89
BRF1-211ENST00000547530 TGP01266 2768 aa9.49□□□□□ -0.89
BRF1-211ENST00000547530 CDK2AP2O75956 126 aa9.49□□□□□ -0.89
BRF1-211ENST00000547530 PRR15Q8IV56 129 aa9.49□□□□□ -0.89
BRF1-211ENST00000547530 ANK2Q01484 3957 aa9.49□□□□□ -0.89
BRF1-211ENST00000547530 H3BNG1 76 aa9.47□□□□□ -0.89
BRF1-211ENST00000547530 CNBPP62633 177 aaKnown RBP9.46□□□□□ -0.9
BRF1-211ENST00000547530 SPRR1AP35321 89 aa9.46□□□□□ -0.9
BRF1-211ENST00000547530 COA5Q86WW8 74 aa9.43□□□□□ -0.9
BRF1-211ENST00000547530 ZCCHC13Q8WW36 166 aaKnown RBP9.43□□□□□ -0.9
BRF1-211ENST00000547530 PANO1I0J062 215 aa9.43□□□□□ -0.9
BRF1-211ENST00000547530 Q1T7F1 81 aa9.41□□□□□ -0.9
BRF1-211ENST00000547530 Q5VV11 94 aa9.41□□□□□ -0.9
BRF1-211ENST00000547530 TLX1NBP0CAT3 122 aa9.41□□□□□ -0.9
BRF1-211ENST00000547530 C16orf90A8MZG2 172 aa9.4□□□□□ -0.9
BRF1-211ENST00000547530 K7EIL1 84 aa9.4□□□□□ -0.91
BRF1-211ENST00000547530 MOBPQ13875 183 aa9.39□□□□□ -0.91
BRF1-211ENST00000547530 A8MWP4 228 aa9.39□□□□□ -0.91
BRF1-211ENST00000547530 DNAH10Q8IVF4 4471 aa9.39□□□□□ -0.91
BRF1-211ENST00000547530 LYSTQ99698 3801 aa9.38□□□□□ -0.91
BRF1-211ENST00000547530 Q8N9P0 234 aaPredicted RBP9.38□□□□□ -0.91
BRF1-211ENST00000547530 PRR26Q8N8Z3 221 aa9.36□□□□□ -0.91
BRF1-211ENST00000547530 CIRBP-AS1Q8TBR5 109 aa9.35□□□□□ -0.91
BRF1-211ENST00000547530 PLA2G2DQ9UNK4 145 aa9.35□□□□□ -0.91
BRF1-211ENST00000547530 A0A087X002 238 aa9.33□□□□□ -0.92
BRF1-211ENST00000547530 NOTCH2NLQ7Z3S9 236 aa9.33□□□□□ -0.92
BRF1-211ENST00000547530 F8WDY8 70 aa9.32□□□□□ -0.92
BRF1-211ENST00000547530 IGLV5-37A0A075B6J1 123 aa9.32□□□□□ -0.92
BRF1-211ENST00000547530 CD164Q04900 197 aa9.31□□□□□ -0.92
BRF1-211ENST00000547530 CYP4F30PQ9H0H9 118 aa9.31□□□□□ -0.92
BRF1-211ENST00000547530 FBN3Q75N90 2809 aa9.31□□□□□ -0.92
BRF1-211ENST00000547530 A0A1B0GW54 56 aa9.3□□□□□ -0.92
BRF1-211ENST00000547530 KRTAP29-1A8MX34 341 aaPredicted RBP9.3□□□□□ -0.92
BRF1-211ENST00000547530 LCA10Q71F78 164 aa9.29□□□□□ -0.92
BRF1-211ENST00000547530 LIMD2Q9BT23 127 aa9.29□□□□□ -0.92
BRF1-211ENST00000547530 LINC00472Q9H8W2 130 aa9.29□□□□□ -0.92
BRF1-211ENST00000547530 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.29□□□□□ -0.92
BRF1-211ENST00000547530 LCE6AA0A183 80 aa9.29□□□□□ -0.92
BRF1-211ENST00000547530 MMP24-AS1A0A0U1RRL7 71 aa9.28□□□□□ -0.92
BRF1-211ENST00000547530 IGLV8-61A0A075B6I0 122 aa9.27□□□□□ -0.93
BRF1-211ENST00000547530 SPINK7P58062 85 aa9.26□□□□□ -0.93
BRF1-211ENST00000547530 C8orf17Q9NRJ1 99 aa9.24□□□□□ -0.93
BRF1-211ENST00000547530 MDFIQ99750 246 aa9.23□□□□□ -0.93
BRF1-211ENST00000547530 SPINK1P00995 79 aa9.21□□□□□ -0.94
BRF1-211ENST00000547530 PRAC1Q96KF2 57 aa9.2□□□□□ -0.94
BRF1-211ENST00000547530 LOC101927531A0A1B0GV80 90 aa9.2□□□□□ -0.94
BRF1-211ENST00000547530 C9orf163Q8N9P6 203 aa9.19□□□□□ -0.94
BRF1-211ENST00000547530 DMBT1Q9UGM3 2413 aaPredicted RBP9.19□□□□□ -0.94
BRF1-211ENST00000547530 HRES1P13985 223 aa9.18□□□□□ -0.94
BRF1-211ENST00000547530 C14orf177Q52M58 125 aa9.18□□□□□ -0.94
BRF1-211ENST00000547530 RBM12B-AS1Q9P1G2 102 aa9.16□□□□□ -0.94
BRF1-211ENST00000547530 PSORS1C2Q9UIG4 136 aa9.16□□□□□ -0.94
BRF1-211ENST00000547530 FLG2Q5D862 2391 aaPredicted RBP9.16□□□□□ -0.94
BRF1-211ENST00000547530 IGLV7-46A0A075B6I9 117 aa9.15□□□□□ -0.94
BRF1-211ENST00000547530 MRPL34Q9BQ48 92 aaKnown RBP9.15□□□□□ -0.95
BRF1-211ENST00000547530 SPANXA2-OT1Q8N9U9 137 aa9.14□□□□□ -0.95
BRF1-211ENST00000547530 A0A1B0GVX0 72 aa9.14□□□□□ -0.95
BRF1-211ENST00000547530 NBDYA0A0U1RRE5 68 aa9.13□□□□□ -0.95
BRF1-211ENST00000547530 Q5W150 140 aa9.13□□□□□ -0.95
BRF1-211ENST00000547530 IGKV2D-30A0A075B6S6 120 aa9.13□□□□□ -0.95
BRF1-211ENST00000547530 IGKV2-30P06310 120 aa9.13□□□□□ -0.95
BRF1-211ENST00000547530 KTN1-AS1Q86SY8 53 aa9.12□□□□□ -0.95
BRF1-211ENST00000547530 H3BPC8 53 aa9.1□□□□□ -0.95
BRF1-211ENST00000547530 ADM2Q7Z4H4 148 aa9.09□□□□□ -0.95
BRF1-211ENST00000547530 APLNQ9ULZ1 77 aa9.09□□□□□ -0.95
BRF1-211ENST00000547530 ATP11AUNQ6ZP68 121 aa9.09□□□□□ -0.95
BRF1-211ENST00000547530 MEGF8Q7Z7M0 2845 aa9.08□□□□□ -0.96
BRF1-211ENST00000547530 TP53AIP1Q9HCN2 124 aa9.07□□□□□ -0.96
BRF1-211ENST00000547530 RTL8CO15255 209 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms