RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 TRAV12-1A0A0B4J245 112 aa1.61□□□□□ -2.15
SNHG1-222ENST00000545308 IGKV3OR2-268A0A0C4DH90 116 aa1.61□□□□□ -2.15
SNHG1-222ENST00000545308 NDUFB6O95139 128 aa1.61□□□□□ -2.15
SNHG1-222ENST00000545308 NCS1P62166 190 aa1.61□□□□□ -2.15
SNHG1-222ENST00000545308 UBE2G1P62253 170 aa1.61□□□□□ -2.15
SNHG1-222ENST00000545308 FAM19A2Q8N3H0 131 aa1.61□□□□□ -2.15
SNHG1-222ENST00000545308 LINC00959A0A1B0GUT2 108 aa1.6□□□□□ -2.15
SNHG1-222ENST00000545308 F2Z2F3 143 aa1.6□□□□□ -2.15
SNHG1-222ENST00000545308 NDUFA1O15239 70 aa1.6□□□□□ -2.15
SNHG1-222ENST00000545308 ERC2-IT1O76042 136 aa1.6□□□□□ -2.15
SNHG1-222ENST00000545308 SERF2P84101 59 aa1.6□□□□□ -2.15
SNHG1-222ENST00000545308 PRR15Q8IV56 129 aa1.6□□□□□ -2.15
SNHG1-222ENST00000545308 AP1S3Q96PC3 154 aa1.6□□□□□ -2.15
SNHG1-222ENST00000545308 TCEAL7Q9BRU2 100 aa1.6□□□□□ -2.15
SNHG1-222ENST00000545308 SPANXCQ9NY87 97 aa1.6□□□□□ -2.15
SNHG1-222ENST00000545308 MRPL35Q9NZE8 188 aaKnown RBP1.6□□□□□ -2.15
SNHG1-222ENST00000545308 UBE2D4Q9Y2X8 147 aa1.6□□□□□ -2.15
SNHG1-222ENST00000545308 ARL2-SNX15V9GYD0 113 aa1.6□□□□□ -2.15
SNHG1-222ENST00000545308 hDV103S1A0JD37 113 aa1.59□□□□□ -2.15
SNHG1-222ENST00000545308 J3KT08 172 aa1.59□□□□□ -2.15
SNHG1-222ENST00000545308 M0QY20 66 aa1.59□□□□□ -2.15
SNHG1-222ENST00000545308 SPINK1P00995 79 aa1.59□□□□□ -2.15
SNHG1-222ENST00000545308 TEN1Q86WV5 123 aa1.59□□□□□ -2.15
SNHG1-222ENST00000545308 RAB37Q96AX2 223 aa1.59□□□□□ -2.15
SNHG1-222ENST00000545308 MED9Q9NWA0 146 aa1.59□□□□□ -2.15
SNHG1-222ENST00000545308 IGKV3D-7A0A0C4DH55 119 aa1.58□□□□□ -2.16
SNHG1-222ENST00000545308 TRBV30A0A0K0K1B3 111 aa1.58□□□□□ -2.16
SNHG1-222ENST00000545308 I3L3M4 83 aa1.58□□□□□ -2.16
SNHG1-222ENST00000545308 MGPP08493 103 aa1.58□□□□□ -2.16
SNHG1-222ENST00000545308 GCHFRP30047 84 aa1.58□□□□□ -2.16
SNHG1-222ENST00000545308 HRCT1Q6UXD1 115 aa1.58□□□□□ -2.16
SNHG1-222ENST00000545308 COX6B2Q6YFQ2 88 aa1.58□□□□□ -2.16
SNHG1-222ENST00000545308 PRELID3AQ96N28 172 aa1.58□□□□□ -2.16
SNHG1-222ENST00000545308 MUC17Q685J3 4493 aa1.58□□□□□ -2.16
SNHG1-222ENST00000545308 BCE1O60756 84 aa1.57□□□□□ -2.16
SNHG1-222ENST00000545308 PPP1R17O96001 155 aa1.57□□□□□ -2.16
SNHG1-222ENST00000545308 DNAL4O96015 105 aa1.57□□□□□ -2.16
SNHG1-222ENST00000545308 ARL14EPLP0DKL9 152 aa1.57□□□□□ -2.16
SNHG1-222ENST00000545308 SCGB1A1P11684 91 aa1.57□□□□□ -2.16
SNHG1-222ENST00000545308 CRIP1P50238 77 aa1.57□□□□□ -2.16
SNHG1-222ENST00000545308 KRTAP12-4P60329 112 aa1.57□□□□□ -2.16
SNHG1-222ENST00000545308 RPS29P62273 56 aaKnown RBP1.57□□□□□ -2.16
SNHG1-222ENST00000545308 MRPS36P82909 103 aaKnown RBP1.57□□□□□ -2.16
SNHG1-222ENST00000545308 CDC42SE2Q9NRR3 84 aa1.57□□□□□ -2.16
SNHG1-222ENST00000545308 TNFSF18Q9UNG2 199 aa1.57□□□□□ -2.16
SNHG1-222ENST00000545308 TRAV13-1A0A0B4J241 112 aa1.56□□□□□ -2.16
SNHG1-222ENST00000545308 F8W1H4 67 aa1.56□□□□□ -2.16
SNHG1-222ENST00000545308 FABP4P15090 132 aa1.56□□□□□ -2.16
SNHG1-222ENST00000545308 MT1HP80294 61 aa1.56□□□□□ -2.16
SNHG1-222ENST00000545308 SPAG11BQ08648 103 aa1.56□□□□□ -2.16
SNHG1-222ENST00000545308 BAGE2Q86Y30 109 aa1.56□□□□□ -2.16
SNHG1-222ENST00000545308 OR10AG1Q8NH19 301 aa1.56□□□□□ -2.16
SNHG1-222ENST00000545308 BRK1Q8WUW1 75 aa1.56□□□□□ -2.16
SNHG1-222ENST00000545308 PSMG3Q9BT73 122 aaPredicted RBP1.56□□□□□ -2.16
SNHG1-222ENST00000545308 CDC42SE1Q9NRR8 79 aa1.56□□□□□ -2.16
SNHG1-222ENST00000545308 C22orf24Q9Y442 160 aa1.56□□□□□ -2.16
SNHG1-222ENST00000545308 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.55□□□□□ -2.16
SNHG1-222ENST00000545308 ZNF727A8MUV8 499 aa1.55□□□□□ -2.16
SNHG1-222ENST00000545308 H3BMG7 143 aa1.55□□□□□ -2.16
SNHG1-222ENST00000545308 H3BRM9 83 aa1.55□□□□□ -2.16
SNHG1-222ENST00000545308 DPM2O94777 84 aa1.55□□□□□ -2.16
SNHG1-222ENST00000545308 FCER1GP30273 86 aa1.55□□□□□ -2.16
SNHG1-222ENST00000545308 CKS1BP61024 79 aa1.55□□□□□ -2.16
SNHG1-222ENST00000545308 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.55□□□□□ -2.16
SNHG1-222ENST00000545308 SSBP3-AS1Q7Z2R9 100 aa1.55□□□□□ -2.16
SNHG1-222ENST00000545308 C5orf38Q86SI9 138 aa1.55□□□□□ -2.16
SNHG1-222ENST00000545308 Q86TA4 180 aa1.55□□□□□ -2.16
SNHG1-222ENST00000545308 ST20Q9HBF5 79 aa1.55□□□□□ -2.16
SNHG1-222ENST00000545308 ORMDL1Q9P0S3 153 aa1.55□□□□□ -2.16
SNHG1-222ENST00000545308 BORCS7-ASMTA0A0B4J1R7 106 aa1.54□□□□□ -2.16
SNHG1-222ENST00000545308 CTXND1A0A1B0GTU2 59 aa1.54□□□□□ -2.16
SNHG1-222ENST00000545308 C7orf77A4D0Y5 90 aa1.54□□□□□ -2.16
SNHG1-222ENST00000545308 ROMO1P60602 79 aa1.54□□□□□ -2.16
SNHG1-222ENST00000545308 UNQ6190/PRO20217Q6UXQ8 127 aa1.54□□□□□ -2.16
SNHG1-222ENST00000545308 C9orf62Q8N4C0 152 aa1.54□□□□□ -2.16
SNHG1-222ENST00000545308 TMEM242Q9NWH2 141 aa1.54□□□□□ -2.16
SNHG1-222ENST00000545308 TRBV27A0A0K0K1C4 114 aa1.53□□□□□ -2.16
SNHG1-222ENST00000545308 MPC2O95563 127 aa1.53□□□□□ -2.16
SNHG1-222ENST00000545308 IGLC6P0CF74 106 aa1.53□□□□□ -2.16
SNHG1-222ENST00000545308 SEC11AP67812 179 aa1.53□□□□□ -2.16
SNHG1-222ENST00000545308 S100A12P80511 92 aa1.53□□□□□ -2.16
SNHG1-222ENST00000545308 PPP1R1CQ8WVI7 109 aa1.53□□□□□ -2.16
SNHG1-222ENST00000545308 KRTAP4-1Q9BYQ7 146 aa1.53□□□□□ -2.16
SNHG1-222ENST00000545308 C6orf48Q9UBA6 75 aa1.53□□□□□ -2.16
SNHG1-222ENST00000545308 SIX6O95475 246 aa1.52□□□□□ -2.17
SNHG1-222ENST00000545308 TRACP01848 142 aa1.52□□□□□ -2.17
SNHG1-222ENST00000545308 POLR2KP53803 58 aaKnown RBP1.52□□□□□ -2.17
SNHG1-222ENST00000545308 CASC2Q6XLA1 102 aa1.52□□□□□ -2.17
SNHG1-222ENST00000545308 TCTE3Q8IZS6 198 aa1.52□□□□□ -2.17
SNHG1-222ENST00000545308 SMIM3Q9BZL3 60 aa1.52□□□□□ -2.17
SNHG1-222ENST00000545308 C20orf202A1L168 122 aa1.51□□□□□ -2.17
SNHG1-222ENST00000545308 F8VRH5 84 aa1.51□□□□□ -2.17
SNHG1-222ENST00000545308 FOXA3P55318 350 aaPredicted RBP1.51□□□□□ -2.17
SNHG1-222ENST00000545308 RPS28P62857 69 aaKnown RBP1.51□□□□□ -2.17
SNHG1-222ENST00000545308 Q8IZM0 81 aa1.51□□□□□ -2.17
SNHG1-222ENST00000545308 CLEC2BQ92478 149 aa1.51□□□□□ -2.17
SNHG1-222ENST00000545308 LIMD2Q9BT23 127 aa1.51□□□□□ -2.17
SNHG1-222ENST00000545308 CNFNQ9BYD5 112 aa1.51□□□□□ -2.17
SNHG1-222ENST00000545308 V9GYH0 126 aa1.51□□□□□ -2.17
SNHG1-222ENST00000545308 FLGP20930 4061 aaPredicted RBP1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms