RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 ATRQ13535 2644 aa8.08□□□□□ -1.12
SMG8-202ENST00000543872 IGLV1-50A0A075B6I6 118 aa8.08□□□□□ -1.12
SMG8-202ENST00000543872 MOBPQ13875 183 aa8.08□□□□□ -1.12
SMG8-202ENST00000543872 IGFL1Q6UW32 110 aa8.07□□□□□ -1.12
SMG8-202ENST00000543872 CASC2Q6XLA1 102 aa8.07□□□□□ -1.12
SMG8-202ENST00000543872 UBR5O95071 2799 aaPredicted RBP8.07□□□□□ -1.12
SMG8-202ENST00000543872 CDC42SE1Q9NRR8 79 aa8.06□□□□□ -1.12
SMG8-202ENST00000543872 KRTAP4-16G5E9R7 235 aaPredicted RBP8.06□□□□□ -1.12
SMG8-202ENST00000543872 PRAC1Q96KF2 57 aa8.06□□□□□ -1.12
SMG8-202ENST00000543872 FLNBO75369 2602 aaKnown RBP8.06□□□□□ -1.12
SMG8-202ENST00000543872 PCOTHQ58A44 107 aa8.05□□□□□ -1.12
SMG8-202ENST00000543872 COA5Q86WW8 74 aa8.05□□□□□ -1.12
SMG8-202ENST00000543872 HECTD1Q9ULT8 2610 aa8.04□□□□□ -1.12
SMG8-202ENST00000543872 SPAG11AQ6PDA7 123 aa8.03□□□□□ -1.12
SMG8-202ENST00000543872 PRLHP81277 87 aa8.02□□□□□ -1.12
SMG8-202ENST00000543872 SPANXA2-OT1Q8N9U9 137 aa8.02□□□□□ -1.12
SMG8-202ENST00000543872 TENM1Q9UKZ4 2725 aa8.02□□□□□ -1.12
SMG8-202ENST00000543872 SRRM2Q9UQ35 2752 aaKnown RBP8.02□□□□□ -1.13
SMG8-202ENST00000543872 MDFIQ99750 246 aa8.02□□□□□ -1.13
SMG8-202ENST00000543872 ITPR2Q14571 2701 aa8.02□□□□□ -1.13
SMG8-202ENST00000543872 OTOGQ6ZRI0 2925 aa8.02□□□□□ -1.13
SMG8-202ENST00000543872 A0A096LNI7 61 aa8.02□□□□□ -1.13
SMG8-202ENST00000543872 SPRR1AP35321 89 aa8.01□□□□□ -1.13
SMG8-202ENST00000543872 KRTAP7-1Q8IUC3 87 aa8.01□□□□□ -1.13
SMG8-202ENST00000543872 LOC101927531A0A1B0GV80 90 aa8.01□□□□□ -1.13
SMG8-202ENST00000543872 CASC10Q5T4H9 136 aa8□□□□□ -1.13
SMG8-202ENST00000543872 KRTAP29-1A8MX34 341 aaPredicted RBP8□□□□□ -1.13
SMG8-202ENST00000543872 H0Y9J4 135 aa7.99□□□□□ -1.13
SMG8-202ENST00000543872 REG3GQ6UW15 175 aa7.99□□□□□ -1.13
SMG8-202ENST00000543872 LINC00313P59037 77 aa7.99□□□□□ -1.13
SMG8-202ENST00000543872 CNBPP62633 177 aaKnown RBP7.98□□□□□ -1.13
SMG8-202ENST00000543872 ADM2Q7Z4H4 148 aa7.97□□□□□ -1.13
SMG8-202ENST00000543872 SMR3AQ99954 134 aa7.97□□□□□ -1.13
SMG8-202ENST00000543872 SPINK7P58062 85 aa7.97□□□□□ -1.13
SMG8-202ENST00000543872 C9orf163Q8N9P6 203 aa7.96□□□□□ -1.14
SMG8-202ENST00000543872 TENM3Q9P273 2699 aa7.96□□□□□ -1.14
SMG8-202ENST00000543872 IGKV2-24A0A0C4DH68 120 aa7.95□□□□□ -1.14
SMG8-202ENST00000543872 H3BPC8 53 aa7.95□□□□□ -1.14
SMG8-202ENST00000543872 KRTAP1-1Q07627 177 aa7.95□□□□□ -1.14
SMG8-202ENST00000543872 PLA2G2DQ9UNK4 145 aa7.95□□□□□ -1.14
SMG8-202ENST00000543872 LINC01556Q5JQF7 62 aa7.94□□□□□ -1.14
SMG8-202ENST00000543872 ANK3Q12955 4377 aaKnown RBP7.94□□□□□ -1.14
SMG8-202ENST00000543872 TENM4Q6N022 2769 aa7.94□□□□□ -1.14
SMG8-202ENST00000543872 TRRAPQ9Y4A5 3859 aa7.93□□□□□ -1.14
SMG8-202ENST00000543872 TLX1NBP0CAT3 122 aa7.93□□□□□ -1.14
SMG8-202ENST00000543872 A8MWP4 228 aa7.92□□□□□ -1.14
SMG8-202ENST00000543872 LINC01554Q52M75 96 aa7.92□□□□□ -1.14
SMG8-202ENST00000543872 PRR26Q8N8Z3 221 aa7.92□□□□□ -1.14
SMG8-202ENST00000543872 IGLV7-46A0A075B6I9 117 aa7.91□□□□□ -1.14
SMG8-202ENST00000543872 IGLV5-37A0A075B6J1 123 aa7.91□□□□□ -1.14
SMG8-202ENST00000543872 DEFB131BA0A096LNP1 70 aa7.9□□□□□ -1.14
SMG8-202ENST00000543872 H3BNG1 76 aa7.88□□□□□ -1.15
SMG8-202ENST00000543872 FBN1P35555 2871 aaKnown RBP7.87□□□□□ -1.15
SMG8-202ENST00000543872 LINC01558Q9Y6Z2 57 aa7.87□□□□□ -1.15
SMG8-202ENST00000543872 LINC00472Q9H8W2 130 aa7.86□□□□□ -1.15
SMG8-202ENST00000543872 MMP24-AS1A0A0U1RRL7 71 aa7.85□□□□□ -1.15
SMG8-202ENST00000543872 MAST4O15021 2626 aa7.84□□□□□ -1.15
SMG8-202ENST00000543872 IGLV8-61A0A075B6I0 122 aa7.83□□□□□ -1.16
SMG8-202ENST00000543872 PLAC8Q9NZF1 115 aa7.83□□□□□ -1.16
SMG8-202ENST00000543872 DNAH10OSP0CZ25 163 aa7.83□□□□□ -1.16
SMG8-202ENST00000543872 HRES1P13985 223 aa7.82□□□□□ -1.16
SMG8-202ENST00000543872 NOTCH1P46531 2555 aa7.82□□□□□ -1.16
SMG8-202ENST00000543872 COL6A5A8TX70 2615 aa7.8□□□□□ -1.16
SMG8-202ENST00000543872 IGHV6-1A0A0B4J1U7 121 aa7.78□□□□□ -1.16
SMG8-202ENST00000543872 NSD1Q96L73 2696 aaPredicted RBP7.78□□□□□ -1.16
SMG8-202ENST00000543872 CHTF8P0CG12 524 aa7.78□□□□□ -1.16
SMG8-202ENST00000543872 KRTAP11-1Q8IUC1 163 aa7.78□□□□□ -1.16
SMG8-202ENST00000543872 COL7A1Q02388 2944 aa7.77□□□□□ -1.16
SMG8-202ENST00000543872 IGLV9-49A0A0B4J1Y8 123 aa7.76□□□□□ -1.17
SMG8-202ENST00000543872 TENM2Q9NT68 2774 aa7.76□□□□□ -1.17
SMG8-202ENST00000543872 PLA2G1BP04054 148 aaKnown RBP7.75□□□□□ -1.17
SMG8-202ENST00000543872 TP53AIP1Q9HCN2 124 aa7.75□□□□□ -1.17
SMG8-202ENST00000543872 C8orf17Q9NRJ1 99 aa7.73□□□□□ -1.17
SMG8-202ENST00000543872 INAFM1C9JVW0 142 aa7.73□□□□□ -1.17
SMG8-202ENST00000543872 CSMD3Q7Z407 3707 aa7.73□□□□□ -1.17
SMG8-202ENST00000543872 K7EIL1 84 aa7.72□□□□□ -1.17
SMG8-202ENST00000543872 KRTAP10-11P60412 298 aa7.72□□□□□ -1.17
SMG8-202ENST00000543872 CDK2AP2O75956 126 aa7.71□□□□□ -1.18
SMG8-202ENST00000543872 RETNLBQ9BQ08 111 aa7.71□□□□□ -1.18
SMG8-202ENST00000543872 NBEAL1Q6ZS30 2694 aa7.69□□□□□ -1.18
SMG8-202ENST00000543872 Q6ZR54 194 aa7.69□□□□□ -1.18
SMG8-202ENST00000543872 STAB1Q9NY15 2570 aa7.68□□□□□ -1.18
SMG8-202ENST00000543872 A0A087X002 238 aa7.68□□□□□ -1.18
SMG8-202ENST00000543872 SPRR1BP22528 89 aa7.68□□□□□ -1.18
SMG8-202ENST00000543872 NOTCH2NLQ7Z3S9 236 aa7.68□□□□□ -1.18
SMG8-202ENST00000543872 CSAG1Q6PB30 78 aa7.67□□□□□ -1.18
SMG8-202ENST00000543872 Q96NJ1 140 aa7.66□□□□□ -1.18
SMG8-202ENST00000543872 MRPL34Q9BQ48 92 aaKnown RBP7.66□□□□□ -1.18
SMG8-202ENST00000543872 RTL8CO15255 209 aa7.65□□□□□ -1.18
SMG8-202ENST00000543872 A0A1B0GVX0 72 aa7.65□□□□□ -1.19
SMG8-202ENST00000543872 SPINK6Q6UWN8 80 aa7.64□□□□□ -1.19
SMG8-202ENST00000543872 ASB16-AS1Q495Z4 193 aa7.62□□□□□ -1.19
SMG8-202ENST00000543872 DNAH10Q8IVF4 4471 aa7.61□□□□□ -1.19
SMG8-202ENST00000543872 Q5W150 140 aa7.61□□□□□ -1.19
SMG8-202ENST00000543872 ZNF706Q9Y5V0 76 aaPredicted RBP7.61□□□□□ -1.19
SMG8-202ENST00000543872 KRTAP1-5Q9BYS1 174 aa7.6□□□□□ -1.19
SMG8-202ENST00000543872 ANAPC11Q9NYG5 84 aa7.6□□□□□ -1.19
SMG8-202ENST00000543872 A0A1B0GU69 56 aa7.6□□□□□ -1.19
SMG8-202ENST00000543872 ACYP2P14621 99 aa7.6□□□□□ -1.19
SMG8-202ENST00000543872 ANK2Q01484 3957 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms