RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 Q6ZQY7 126 aa7.19□□□□□ -1.26
DDX55-210ENST00000543016 SSBP3-AS1Q7Z2R9 100 aa7.19□□□□□ -1.26
DDX55-210ENST00000543016 LRP1Q07954 4544 aaKnown RBP7.19□□□□□ -1.26
DDX55-210ENST00000543016 KRTAP13-2Q52LG2 175 aa7.18□□□□□ -1.26
DDX55-210ENST00000543016 LYRM7Q5U5X0 104 aa7.18□□□□□ -1.26
DDX55-210ENST00000543016 DEFB105AQ8NG35 78 aa7.18□□□□□ -1.26
DDX55-210ENST00000543016 FAT3Q8TDW7 4589 aa7.18□□□□□ -1.26
DDX55-210ENST00000543016 LINC01547P58512 204 aaPredicted RBP7.17□□□□□ -1.26
DDX55-210ENST00000543016 FAM218AQ96MZ4 157 aa7.17□□□□□ -1.26
DDX55-210ENST00000543016 DNAL4O96015 105 aa7.16□□□□□ -1.26
DDX55-210ENST00000543016 Q8N377 158 aa7.16□□□□□ -1.26
DDX55-210ENST00000543016 TRACP01848 142 aa7.15□□□□□ -1.26
DDX55-210ENST00000543016 SPAG11AQ6PDA7 123 aa7.15□□□□□ -1.26
DDX55-210ENST00000543016 LST1O00453 97 aa7.14□□□□□ -1.27
DDX55-210ENST00000543016 SMIM29Q86T20 159 aa7.14□□□□□ -1.27
DDX55-210ENST00000543016 C3orf22Q8N5N4 141 aa7.14□□□□□ -1.27
DDX55-210ENST00000543016 Q8NBF4 154 aa7.14□□□□□ -1.27
DDX55-210ENST00000543016 CLEC2BQ92478 149 aa7.14□□□□□ -1.27
DDX55-210ENST00000543016 SNHG12Q9BXW3 62 aa7.14□□□□□ -1.27
DDX55-210ENST00000543016 TRBV20-1A0A075B6N2 111 aa7.13□□□□□ -1.27
DDX55-210ENST00000543016 IGLV9-49A0A0B4J1Y8 123 aa7.13□□□□□ -1.27
DDX55-210ENST00000543016 C9orf118A6NHY6 69 aa7.13□□□□□ -1.27
DDX55-210ENST00000543016 F8WEM9 126 aa7.13□□□□□ -1.27
DDX55-210ENST00000543016 MOBPQ13875 183 aa7.13□□□□□ -1.27
DDX55-210ENST00000543016 COL5A1-AS1Q5SY13 56 aa7.13□□□□□ -1.27
DDX55-210ENST00000543016 C9orf153Q5TBE3 101 aa7.13□□□□□ -1.27
DDX55-210ENST00000543016 LINC00304Q8N9R0 145 aa7.13□□□□□ -1.27
DDX55-210ENST00000543016 PCP4L1A6NKN8 68 aa7.12□□□□□ -1.27
DDX55-210ENST00000543016 ATXN8Q156A1 80 aa7.12□□□□□ -1.27
DDX55-210ENST00000543016 ORMDL1Q9P0S3 153 aa7.12□□□□□ -1.27
DDX55-210ENST00000543016 TMEM256-PLSCR3K7ERE1 68 aa7.11□□□□□ -1.27
DDX55-210ENST00000543016 TAX1BP3O14907 124 aa7.11□□□□□ -1.27
DDX55-210ENST00000543016 H3BUT2 72 aa7.1□□□□□ -1.27
DDX55-210ENST00000543016 TNXBP22105 4242 aa7.1□□□□□ -1.27
DDX55-210ENST00000543016 IGLV8-61A0A075B6I0 122 aa7.09□□□□□ -1.27
DDX55-210ENST00000543016 SPINK1P00995 79 aa7.09□□□□□ -1.27
DDX55-210ENST00000543016 Q6JHZ5 121 aa7.09□□□□□ -1.27
DDX55-210ENST00000543016 A0A1W2PPM0 123 aa7.08□□□□□ -1.28
DDX55-210ENST00000543016 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.08□□□□□ -1.28
DDX55-210ENST00000543016 TCL1BO95988 128 aa7.08□□□□□ -1.28
DDX55-210ENST00000543016 FABP2P12104 132 aa7.08□□□□□ -1.28
DDX55-210ENST00000543016 RPS29P62273 56 aaKnown RBP7.08□□□□□ -1.28
DDX55-210ENST00000543016 CD164Q04900 197 aa7.08□□□□□ -1.28
DDX55-210ENST00000543016 NAA38Q9BRA0 125 aaKnown RBP7.08□□□□□ -1.28
DDX55-210ENST00000543016 KRTAP9-2Q9BYQ4 174 aa7.08□□□□□ -1.28
DDX55-210ENST00000543016 NDUFV3P56181 108 aaKnown RBP7.07□□□□□ -1.28
DDX55-210ENST00000543016 UBE2V1Q13404 147 aa7.07□□□□□ -1.28
DDX55-210ENST00000543016 BAALC-AS2P0C853 105 aa7.04□□□□□ -1.28
DDX55-210ENST00000543016 KRTAP9-6A0A140TA67 174 aa7.03□□□□□ -1.28
DDX55-210ENST00000543016 H3BMG7 143 aa7.03□□□□□ -1.28
DDX55-210ENST00000543016 LIMD2Q9BT23 127 aa7.01□□□□□ -1.29
DDX55-210ENST00000543016 SPCS1Q9Y6A9 102 aa7.01□□□□□ -1.29
DDX55-210ENST00000543016 Q5XG85 94 aa7□□□□□ -1.29
DDX55-210ENST00000543016 IGFL1Q6UW32 110 aa7□□□□□ -1.29
DDX55-210ENST00000543016 ANKRD29Q8N6D5 301 aa7□□□□□ -1.29
DDX55-210ENST00000543016 C9JAW5 83 aa6.99□□□□□ -1.29
DDX55-210ENST00000543016 JMJD7-PLA2G4BH0Y9G9 81 aa6.98□□□□□ -1.29
DDX55-210ENST00000543016 H3BT86 120 aa6.98□□□□□ -1.29
DDX55-210ENST00000543016 Q6Q795 121 aa6.98□□□□□ -1.29
DDX55-210ENST00000543016 RBM3P98179 157 aaKnown RBP6.97□□□□□ -1.29
DDX55-210ENST00000543016 TEN1Q86WV5 123 aa6.97□□□□□ -1.29
DDX55-210ENST00000543016 KRTAP4-12Q9BQ66 201 aa6.97□□□□□ -1.29
DDX55-210ENST00000543016 C21orf62-AS1Q17RA5 79 aa6.96□□□□□ -1.3
DDX55-210ENST00000543016 GTF2H5Q6ZYL4 71 aa6.96□□□□□ -1.3
DDX55-210ENST00000543016 TRBV7-7A0A0K0K1E9 115 aa6.95□□□□□ -1.3
DDX55-210ENST00000543016 K7EP34 96 aa6.95□□□□□ -1.3
DDX55-210ENST00000543016 HRCT1Q6UXD1 115 aa6.95□□□□□ -1.3
DDX55-210ENST00000543016 FP248Q71RG6 208 aaPredicted RBP6.95□□□□□ -1.3
DDX55-210ENST00000543016 DSCR8Q96T75 97 aa6.95□□□□□ -1.3
DDX55-210ENST00000543016 PDE6GP18545 87 aa6.94□□□□□ -1.3
DDX55-210ENST00000543016 HERC1Q15751 4861 aa6.94□□□□□ -1.3
DDX55-210ENST00000543016 A0A0G2JQZ4 141 aa6.93□□□□□ -1.3
DDX55-210ENST00000543016 TRBV7-4A0A0J9YYF1 115 aa6.93□□□□□ -1.3
DDX55-210ENST00000543016 ASB16-AS1Q495Z4 193 aa6.92□□□□□ -1.3
DDX55-210ENST00000543016 SS18L2Q9UHA2 77 aa6.92□□□□□ -1.3
DDX55-210ENST00000543016 PRR4Q16378 134 aa6.91□□□□□ -1.3
DDX55-210ENST00000543016 KRTAP19-1Q8IUB9 90 aa6.91□□□□□ -1.3
DDX55-210ENST00000543016 OBSCN-AS1Q96MR7 158 aa6.91□□□□□ -1.3
DDX55-210ENST00000543016 LOC110117498A0A087WWA1 95 aa6.9□□□□□ -1.3
DDX55-210ENST00000543016 A0A1B0GW54 56 aa6.9□□□□□ -1.3
DDX55-210ENST00000543016 A0A1W2PNM2 257 aa6.89□□□□□ -1.31
DDX55-210ENST00000543016 CCKP06307 115 aa6.89□□□□□ -1.31
DDX55-210ENST00000543016 IGLV7-46A0A075B6I9 117 aa6.88□□□□□ -1.31
DDX55-210ENST00000543016 A0A1B0GV72 72 aa6.88□□□□□ -1.31
DDX55-210ENST00000543016 RETNLBQ9BQ08 111 aa6.88□□□□□ -1.31
DDX55-210ENST00000543016 F8W1H4 67 aa6.87□□□□□ -1.31
DDX55-210ENST00000543016 PRO0461Q9UI25 63 aa6.87□□□□□ -1.31
DDX55-210ENST00000543016 A0A087WSZ3 146 aa6.86□□□□□ -1.31
DDX55-210ENST00000543016 C1orf195Q5TG92 126 aa6.86□□□□□ -1.31
DDX55-210ENST00000543016 MTURNQ8N3F0 131 aa6.86□□□□□ -1.31
DDX55-210ENST00000543016 Q6ZQT0 140 aa6.85□□□□□ -1.31
DDX55-210ENST00000543016 TPRXLQ17RH7 258 aa6.84□□□□□ -1.31
DDX55-210ENST00000543016 C14orf132Q9NPU4 83 aa6.84□□□□□ -1.31
DDX55-210ENST00000543016 VPS25Q9BRG1 176 aa6.83□□□□□ -1.32
DDX55-210ENST00000543016 LCE3BQ5TA77 95 aa6.82□□□□□ -1.32
DDX55-210ENST00000543016 HMCN2Q8NDA2 5059 aa6.8□□□□□ -1.32
DDX55-210ENST00000543016 KRTAP13-3Q3SY46 172 aa6.78□□□□□ -1.32
DDX55-210ENST00000543016 CDIP1Q9H305 208 aa6.77□□□□□ -1.33
DDX55-210ENST00000543016 LINC00472Q9H8W2 130 aa6.77□□□□□ -1.33
DDX55-210ENST00000543016 A0A1B0GV90 55 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms