RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 CNBPP62633 177 aaKnown RBP3.94□□□□□ -1.78
DMD-228ENST00000541735 LCE6AA0A183 80 aa3.94□□□□□ -1.78
DMD-228ENST00000541735 VPS13AQ96RL7 3174 aa3.94□□□□□ -1.78
DMD-228ENST00000541735 CFAP46Q8IYW2 2715 aa3.94□□□□□ -1.78
DMD-228ENST00000541735 Q1T7F1 81 aa3.93□□□□□ -1.78
DMD-228ENST00000541735 KRTAP10-2P60368 255 aa3.93□□□□□ -1.78
DMD-228ENST00000541735 SETXQ7Z333 2677 aaKnown RBP3.93□□□□□ -1.78
DMD-228ENST00000541735 KRTAP1-1Q07627 177 aa3.93□□□□□ -1.78
DMD-228ENST00000541735 PRO0461Q9UI25 63 aa3.92□□□□□ -1.78
DMD-228ENST00000541735 KRTAP10-1P60331 282 aa3.92□□□□□ -1.78
DMD-228ENST00000541735 SPEGQ15772 3267 aa3.92□□□□□ -1.78
DMD-228ENST00000541735 A0A096LNT2 108 aa3.92□□□□□ -1.78
DMD-228ENST00000541735 SPINK7P58062 85 aa3.91□□□□□ -1.78
DMD-228ENST00000541735 H3BS24 57 aa3.91□□□□□ -1.78
DMD-228ENST00000541735 A0A1W2PNM2 257 aa3.91□□□□□ -1.78
DMD-228ENST00000541735 ITPR3Q14573 2671 aa3.91□□□□□ -1.78
DMD-228ENST00000541735 ZCCHC13Q8WW36 166 aaKnown RBP3.91□□□□□ -1.78
DMD-228ENST00000541735 KLKP1Q107X0 134 aa3.9□□□□□ -1.78
DMD-228ENST00000541735 STAB1Q9NY15 2570 aa3.9□□□□□ -1.79
DMD-228ENST00000541735 Q8N9P0 234 aaPredicted RBP3.89□□□□□ -1.79
DMD-228ENST00000541735 A0A0A0MQY5 61 aa3.88□□□□□ -1.79
DMD-228ENST00000541735 ADM2Q7Z4H4 148 aa3.88□□□□□ -1.79
DMD-228ENST00000541735 LAMA1P25391 3075 aa3.87□□□□□ -1.79
DMD-228ENST00000541735 MYO15AQ9UKN7 3530 aa3.87□□□□□ -1.79
DMD-228ENST00000541735 OXTP01178 125 aa3.86□□□□□ -1.79
DMD-228ENST00000541735 HELZ2Q9BYK8 2649 aaKnown RBP3.86□□□□□ -1.79
DMD-228ENST00000541735 DMBT1Q9UGM3 2413 aaPredicted RBP3.86□□□□□ -1.79
DMD-228ENST00000541735 KLK9Q2XQG4 91 aa3.84□□□□□ -1.79
DMD-228ENST00000541735 PLAC8Q9NZF1 115 aa3.84□□□□□ -1.79
DMD-228ENST00000541735 TEP1Q99973 2627 aaKnown RBP3.83□□□□□ -1.8
DMD-228ENST00000541735 FLNAP21333 2647 aaKnown RBP3.82□□□□□ -1.8
DMD-228ENST00000541735 FAM229BQ4G0N7 80 aa3.82□□□□□ -1.8
DMD-228ENST00000541735 DMAC1Q96GE9 116 aa3.82□□□□□ -1.8
DMD-228ENST00000541735 CHD9Q3L8U1 2897 aa3.82□□□□□ -1.8
DMD-228ENST00000541735 FREM2Q5SZK8 3169 aa3.81□□□□□ -1.8
DMD-228ENST00000541735 AKAP13Q12802 2813 aa3.81□□□□□ -1.8
DMD-228ENST00000541735 KRTAP1-5Q9BYS1 174 aa3.81□□□□□ -1.8
DMD-228ENST00000541735 MGAQ8IWI9 3026 aa3.81□□□□□ -1.8
DMD-228ENST00000541735 TEX15Q9BXT5 2789 aa3.81□□□□□ -1.8
DMD-228ENST00000541735 SPATA8Q6RVD6 105 aa3.8□□□□□ -1.8
DMD-228ENST00000541735 USP34Q70CQ2 3546 aa3.8□□□□□ -1.8
DMD-228ENST00000541735 SPTBN5Q9NRC6 3674 aaKnown RBP3.8□□□□□ -1.8
DMD-228ENST00000541735 SPANXA2-OT1Q8N9U9 137 aa3.8□□□□□ -1.8
DMD-228ENST00000541735 PRAC1Q96KF2 57 aa3.8□□□□□ -1.8
DMD-228ENST00000541735 H7BZZ5 65 aa3.8□□□□□ -1.8
DMD-228ENST00000541735 Q5W150 140 aa3.8□□□□□ -1.8
DMD-228ENST00000541735 A0A1B0GVY2 172 aa3.79□□□□□ -1.8
DMD-228ENST00000541735 C20orf166-AS1Q96NR2 134 aa3.79□□□□□ -1.8
DMD-228ENST00000541735 STAB2Q8WWQ8 2551 aa3.77□□□□□ -1.81
DMD-228ENST00000541735 FRYLO94915 3013 aa3.77□□□□□ -1.81
DMD-228ENST00000541735 CENPEQ02224 2701 aa3.76□□□□□ -1.81
DMD-228ENST00000541735 MAP1AP78559 2803 aaPredicted RBP3.75□□□□□ -1.81
DMD-228ENST00000541735 BAHCC1Q9P281 2608 aa3.75□□□□□ -1.81
DMD-228ENST00000541735 NBEAL1Q6ZS30 2694 aa3.74□□□□□ -1.81
DMD-228ENST00000541735 FP248Q71RG6 208 aaPredicted RBP3.74□□□□□ -1.81
DMD-228ENST00000541735 CRYBG3Q68DQ2 2970 aa3.74□□□□□ -1.81
DMD-228ENST00000541735 MMP24-AS1A0A0U1RRL7 71 aa3.74□□□□□ -1.81
DMD-228ENST00000541735 Q8NDZ9 215 aa3.74□□□□□ -1.81
DMD-228ENST00000541735 BOD1L1Q8NFC6 3051 aa3.73□□□□□ -1.81
DMD-228ENST00000541735 PANO1I0J062 215 aa3.73□□□□□ -1.81
DMD-228ENST00000541735 A0A087X002 238 aa3.73□□□□□ -1.81
DMD-228ENST00000541735 RPL37P61927 97 aaKnown RBP3.73□□□□□ -1.81
DMD-228ENST00000541735 CFAP47Q6ZTR5 3102 aa3.72□□□□□ -1.81
DMD-228ENST00000541735 TRANK1O15050 2925 aa3.72□□□□□ -1.81
DMD-228ENST00000541735 CHD6Q8TD26 2715 aa3.72□□□□□ -1.81
DMD-228ENST00000541735 A8MUU9 505 aa3.71□□□□□ -1.81
DMD-228ENST00000541735 DSPP15924 2871 aaKnown RBP3.71□□□□□ -1.82
DMD-228ENST00000541735 NOTCH1P46531 2555 aa3.71□□□□□ -1.82
DMD-228ENST00000541735 COL12A1Q99715 3063 aa3.71□□□□□ -1.82
DMD-228ENST00000541735 ROMO1P60602 79 aa3.71□□□□□ -1.82
DMD-228ENST00000541735 WDFY3Q8IZQ1 3526 aa3.7□□□□□ -1.82
DMD-228ENST00000541735 REV3LO60673 3130 aa3.7□□□□□ -1.82
DMD-228ENST00000541735 SPRR1BP22528 89 aa3.7□□□□□ -1.82
DMD-228ENST00000541735 FRYQ5TBA9 3013 aa3.69□□□□□ -1.82
DMD-228ENST00000541735 KMT2BQ9UMN6 2715 aaPredicted RBP3.69□□□□□ -1.82
DMD-228ENST00000541735 KRTAP10-8P60410 259 aa3.69□□□□□ -1.82
DMD-228ENST00000541735 Q6ZR54 194 aa3.69□□□□□ -1.82
DMD-228ENST00000541735 UNC79Q9P2D8 2635 aa3.69□□□□□ -1.82
DMD-228ENST00000541735 COL6A5A8TX70 2615 aa3.68□□□□□ -1.82
DMD-228ENST00000541735 OCR1Q9BZK8 76 aa3.67□□□□□ -1.82
DMD-228ENST00000541735 ASPMQ8IZT6 3477 aa3.66□□□□□ -1.82
DMD-228ENST00000541735 Q75L30 129 aa3.66□□□□□ -1.82
DMD-228ENST00000541735 KRTAP16-1A8MUX0 517 aa3.66□□□□□ -1.82
DMD-228ENST00000541735 TNRC18O15417 2968 aaPredicted RBP3.64□□□□□ -1.83
DMD-228ENST00000541735 C10orf95Q9H7T3 257 aa3.64□□□□□ -1.83
DMD-228ENST00000541735 A8MU10 97 aa3.64□□□□□ -1.83
DMD-228ENST00000541735 DMXL2Q8TDJ6 3036 aa3.64□□□□□ -1.83
DMD-228ENST00000541735 KRTAP26-1Q6PEX3 210 aa3.63□□□□□ -1.83
DMD-228ENST00000541735 MUC3AQ02505 3323 aa3.63□□□□□ -1.83
DMD-228ENST00000541735 LINC01558Q9Y6Z2 57 aa3.63□□□□□ -1.83
DMD-228ENST00000541735 DMXL1Q9Y485 3027 aa3.63□□□□□ -1.83
DMD-228ENST00000541735 LINC00472Q9H8W2 130 aa3.63□□□□□ -1.83
DMD-228ENST00000541735 KRTAP10-10P60014 251 aa3.61□□□□□ -1.83
DMD-228ENST00000541735 LOC400499M0QZD8 3231 aa3.61□□□□□ -1.83
DMD-228ENST00000541735 NOTCH2NLQ7Z3S9 236 aa3.61□□□□□ -1.83
DMD-228ENST00000541735 ADGRG4Q8IZF6 3080 aa3.6□□□□□ -1.83
DMD-228ENST00000541735 DMDP11532 3685 aa3.59□□□□□ -1.84
DMD-228ENST00000541735 LAMA5O15230 3695 aa3.58□□□□□ -1.84
DMD-228ENST00000541735 TNP1P09430 55 aa3.58□□□□□ -1.84
DMD-228ENST00000541735 ATMQ13315 3056 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms