RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 DHRS4-AS1Q9P1J3 65 aa4.11□□□□□ -1.75
CLTCL1-206ENST00000540896 A0A1B0GX51 115 aa4.1□□□□□ -1.75
CLTCL1-206ENST00000540896 KRTAP29-1A8MX34 341 aaPredicted RBP4.1□□□□□ -1.75
CLTCL1-206ENST00000540896 TRACP01848 142 aa4.1□□□□□ -1.75
CLTCL1-206ENST00000540896 SMR3BP02814 79 aaPredicted RBP4.1□□□□□ -1.75
CLTCL1-206ENST00000540896 HIGD2AQ9BW72 106 aa4.1□□□□□ -1.75
CLTCL1-206ENST00000540896 APOBP04114 4563 aaKnown RBP4.09□□□□□ -1.75
CLTCL1-206ENST00000540896 C9JAW5 83 aa4.09□□□□□ -1.75
CLTCL1-206ENST00000540896 KRTAP4-16G5E9R7 235 aaPredicted RBP4.09□□□□□ -1.75
CLTCL1-206ENST00000540896 UBE2V1Q13404 147 aa4.09□□□□□ -1.75
CLTCL1-206ENST00000540896 DEFB105AQ8NG35 78 aa4.09□□□□□ -1.75
CLTCL1-206ENST00000540896 H0Y9J4 135 aa4.08□□□□□ -1.76
CLTCL1-206ENST00000540896 IGLV7-43P04211 117 aa4.08□□□□□ -1.76
CLTCL1-206ENST00000540896 BAALC-AS2P0C853 105 aa4.08□□□□□ -1.76
CLTCL1-206ENST00000540896 Q6ZQY7 126 aa4.08□□□□□ -1.76
CLTCL1-206ENST00000540896 MTURNQ8N3F0 131 aa4.08□□□□□ -1.76
CLTCL1-206ENST00000540896 SMCR5Q8TEV8 140 aa4.08□□□□□ -1.76
CLTCL1-206ENST00000540896 Q9BRP9 147 aa4.08□□□□□ -1.76
CLTCL1-206ENST00000540896 ORMDL1Q9P0S3 153 aa4.08□□□□□ -1.76
CLTCL1-206ENST00000540896 ZNF861PO60384 105 aa4.07□□□□□ -1.76
CLTCL1-206ENST00000540896 RPL37AP61513 92 aaKnown RBP4.07□□□□□ -1.76
CLTCL1-206ENST00000540896 OCIAD2Q56VL3 154 aa4.07□□□□□ -1.76
CLTCL1-206ENST00000540896 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.07□□□□□ -1.76
CLTCL1-206ENST00000540896 HSPG2P98160 4391 aa4.07□□□□□ -1.76
CLTCL1-206ENST00000540896 F8W1H4 67 aa4.06□□□□□ -1.76
CLTCL1-206ENST00000540896 ERC2-IT1O76042 136 aa4.06□□□□□ -1.76
CLTCL1-206ENST00000540896 H3BQ85 93 aa4.05□□□□□ -1.76
CLTCL1-206ENST00000540896 TMEM256-PLSCR3K7ERE1 68 aa4.05□□□□□ -1.76
CLTCL1-206ENST00000540896 ANKRD29Q8N6D5 301 aa4.05□□□□□ -1.76
CLTCL1-206ENST00000540896 ST20-AS1Q8NBB2 130 aa4.05□□□□□ -1.76
CLTCL1-206ENST00000540896 TEX49A0A1B0GTD5 131 aa4.04□□□□□ -1.76
CLTCL1-206ENST00000540896 H3BT86 120 aa4.04□□□□□ -1.76
CLTCL1-206ENST00000540896 GAGE2AQ6NT46 116 aa4.04□□□□□ -1.76
CLTCL1-206ENST00000540896 KRTAP13-1Q8IUC0 172 aa4.04□□□□□ -1.76
CLTCL1-206ENST00000540896 LAMTOR3Q9UHA4 124 aa4.04□□□□□ -1.76
CLTCL1-206ENST00000540896 ZNF706Q9Y5V0 76 aaPredicted RBP4.04□□□□□ -1.76
CLTCL1-206ENST00000540896 Q5VSD8 79 aa4.03□□□□□ -1.76
CLTCL1-206ENST00000540896 SRRM2Q9UQ35 2752 aaKnown RBP4.03□□□□□ -1.76
CLTCL1-206ENST00000540896 ABCA13Q86UQ4 5058 aa4.02□□□□□ -1.77
CLTCL1-206ENST00000540896 A0A1B0GV72 72 aa4.02□□□□□ -1.77
CLTCL1-206ENST00000540896 F8WEM9 126 aa4.02□□□□□ -1.77
CLTCL1-206ENST00000540896 NDUFV3P56181 108 aaKnown RBP4.02□□□□□ -1.77
CLTCL1-206ENST00000540896 Q8N377 158 aa4.02□□□□□ -1.77
CLTCL1-206ENST00000540896 PPDPFLQ8WWR9 84 aa4.02□□□□□ -1.77
CLTCL1-206ENST00000540896 SPRR4Q96PI1 79 aa4.02□□□□□ -1.77
CLTCL1-206ENST00000540896 PRO0461Q9UI25 63 aa4.02□□□□□ -1.77
CLTCL1-206ENST00000540896 FAT1Q14517 4588 aa4.01□□□□□ -1.77
CLTCL1-206ENST00000540896 VPS13BQ7Z7G8 4022 aa4.01□□□□□ -1.77
CLTCL1-206ENST00000540896 IGLV5-48A0A075B6I7 105 aa4.01□□□□□ -1.77
CLTCL1-206ENST00000540896 SPINK6Q6UWN8 80 aa4.01□□□□□ -1.77
CLTCL1-206ENST00000540896 LINC01547P58512 204 aaPredicted RBP4□□□□□ -1.77
CLTCL1-206ENST00000540896 RBM3P98179 157 aaKnown RBP4□□□□□ -1.77
CLTCL1-206ENST00000540896 ETDBQ3ZM63 59 aa4□□□□□ -1.77
CLTCL1-206ENST00000540896 TEN1Q86WV5 123 aa4□□□□□ -1.77
CLTCL1-206ENST00000540896 C3orf22Q8N5N4 141 aa4□□□□□ -1.77
CLTCL1-206ENST00000540896 JMJD7-PLA2G4BH0Y9G9 81 aa3.99□□□□□ -1.77
CLTCL1-206ENST00000540896 SPRR1BP22528 89 aa3.99□□□□□ -1.77
CLTCL1-206ENST00000540896 KRTAP10-4P60372 401 aaPredicted RBP3.99□□□□□ -1.77
CLTCL1-206ENST00000540896 Q8N9P0 234 aaPredicted RBP3.99□□□□□ -1.77
CLTCL1-206ENST00000540896 DSCR8Q96T75 97 aa3.99□□□□□ -1.77
CLTCL1-206ENST00000540896 ANAPC11Q9NYG5 84 aa3.99□□□□□ -1.77
CLTCL1-206ENST00000540896 IGLV9-49A0A0B4J1Y8 123 aa3.98□□□□□ -1.77
CLTCL1-206ENST00000540896 C9orf153Q5TBE3 101 aa3.98□□□□□ -1.77
CLTCL1-206ENST00000540896 LINC01600Q96MT4 127 aa3.98□□□□□ -1.77
CLTCL1-206ENST00000540896 LINC00483Q53H64 154 aa3.97□□□□□ -1.77
CLTCL1-206ENST00000540896 SMIM29Q86T20 159 aa3.97□□□□□ -1.77
CLTCL1-206ENST00000540896 C14orf132Q9NPU4 83 aa3.97□□□□□ -1.77
CLTCL1-206ENST00000540896 CRYGAP11844 174 aa3.96□□□□□ -1.78
CLTCL1-206ENST00000540896 PDE6GP18545 87 aa3.96□□□□□ -1.78
CLTCL1-206ENST00000540896 FAM229BQ4G0N7 80 aa3.96□□□□□ -1.78
CLTCL1-206ENST00000540896 VPS25Q9BRG1 176 aa3.96□□□□□ -1.78
CLTCL1-206ENST00000540896 MOBPQ13875 183 aa3.95□□□□□ -1.78
CLTCL1-206ENST00000540896 LCE1AQ5T7P2 110 aa3.95□□□□□ -1.78
CLTCL1-206ENST00000540896 Q6JHZ5 121 aa3.95□□□□□ -1.78
CLTCL1-206ENST00000540896 OBSCN-AS1Q96MR7 158 aa3.95□□□□□ -1.78
CLTCL1-206ENST00000540896 DMBT1Q9UGM3 2413 aaPredicted RBP3.95□□□□□ -1.78
CLTCL1-206ENST00000540896 LOC110117498A0A087WWA1 95 aa3.94□□□□□ -1.78
CLTCL1-206ENST00000540896 J3QR89 54 aa3.94□□□□□ -1.78
CLTCL1-206ENST00000540896 Q8NBF4 154 aa3.94□□□□□ -1.78
CLTCL1-206ENST00000540896 FLG2Q5D862 2391 aaPredicted RBP3.94□□□□□ -1.78
CLTCL1-206ENST00000540896 IGLV8-61A0A075B6I0 122 aa3.93□□□□□ -1.78
CLTCL1-206ENST00000540896 A0A087X002 238 aa3.93□□□□□ -1.78
CLTCL1-206ENST00000540896 A0A0G2JQZ4 141 aa3.93□□□□□ -1.78
CLTCL1-206ENST00000540896 TRBV7-4A0A0J9YYF1 115 aa3.93□□□□□ -1.78
CLTCL1-206ENST00000540896 CCKP06307 115 aa3.93□□□□□ -1.78
CLTCL1-206ENST00000540896 KRTAP1-4P0C5Y4 121 aa3.93□□□□□ -1.78
CLTCL1-206ENST00000540896 PRR26Q8N8Z3 221 aa3.93□□□□□ -1.78
CLTCL1-206ENST00000540896 TYMSOSQ8TAI1 123 aa3.93□□□□□ -1.78
CLTCL1-206ENST00000540896 PKHD1L1Q86WI1 4243 aa3.92□□□□□ -1.78
CLTCL1-206ENST00000540896 A0A0A0MQY5 61 aa3.92□□□□□ -1.78
CLTCL1-206ENST00000540896 K7ERU9 68 aa3.92□□□□□ -1.78
CLTCL1-206ENST00000540896 IGFL1Q6UW32 110 aa3.92□□□□□ -1.78
CLTCL1-206ENST00000540896 HRCT1Q6UXD1 115 aa3.92□□□□□ -1.78
CLTCL1-206ENST00000540896 Q6ZQT0 140 aa3.92□□□□□ -1.78
CLTCL1-206ENST00000540896 SSBP3-AS1Q7Z2R9 100 aa3.92□□□□□ -1.78
CLTCL1-206ENST00000540896 KRTAP13-2Q52LG2 175 aa3.91□□□□□ -1.78
CLTCL1-206ENST00000540896 A0A1W2PNM2 257 aa3.9□□□□□ -1.79
CLTCL1-206ENST00000540896 MYCBP2O75592 4640 aa3.9□□□□□ -1.79
CLTCL1-206ENST00000540896 HERC1Q15751 4861 aa3.9□□□□□ -1.79
CLTCL1-206ENST00000540896 IGKV2-30P06310 120 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms