RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 Q1RN00 199 aa8.47□□□□□ -1.05
USB1-203ENST00000539737 FP248Q71RG6 208 aaPredicted RBP8.47□□□□□ -1.05
USB1-203ENST00000539737 DEFB105AQ8NG35 78 aa8.47□□□□□ -1.05
USB1-203ENST00000539737 hADV29S1A0JD25 119 aa8.46□□□□□ -1.06
USB1-203ENST00000539737 PRO1854Q9UHT4 67 aa8.46□□□□□ -1.06
USB1-203ENST00000539737 LCE2DQ5TA82 110 aaPredicted RBP8.45□□□□□ -1.06
USB1-203ENST00000539737 LINC01547P58512 204 aaPredicted RBP8.44□□□□□ -1.06
USB1-203ENST00000539737 SNCGO76070 127 aa8.43□□□□□ -1.06
USB1-203ENST00000539737 RPS29P62273 56 aaKnown RBP8.43□□□□□ -1.06
USB1-203ENST00000539737 Q6ZQY7 126 aa8.43□□□□□ -1.06
USB1-203ENST00000539737 H0YGX0 51 aa8.42□□□□□ -1.06
USB1-203ENST00000539737 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.42□□□□□ -1.06
USB1-203ENST00000539737 KRTAP13-3Q3SY46 172 aa8.4□□□□□ -1.06
USB1-203ENST00000539737 SMIM29Q86T20 159 aa8.4□□□□□ -1.06
USB1-203ENST00000539737 Q8N377 158 aa8.4□□□□□ -1.06
USB1-203ENST00000539737 PRO1933Q9H354 126 aa8.4□□□□□ -1.06
USB1-203ENST00000539737 F8WEM9 126 aa8.39□□□□□ -1.07
USB1-203ENST00000539737 K7ERJ3 54 aa8.39□□□□□ -1.07
USB1-203ENST00000539737 PPDPFLQ8WWR9 84 aa8.39□□□□□ -1.07
USB1-203ENST00000539737 A0A1B0GX51 115 aa8.37□□□□□ -1.07
USB1-203ENST00000539737 TRIAP1O43715 76 aa8.37□□□□□ -1.07
USB1-203ENST00000539737 ASB16-AS1Q495Z4 193 aa8.37□□□□□ -1.07
USB1-203ENST00000539737 OCIAD2Q56VL3 154 aa8.37□□□□□ -1.07
USB1-203ENST00000539737 LOC105371267A0A1B0GV96 52 aa8.36□□□□□ -1.07
USB1-203ENST00000539737 M0R143 59 aa8.36□□□□□ -1.07
USB1-203ENST00000539737 TSTD3H0UI37 97 aa8.35□□□□□ -1.07
USB1-203ENST00000539737 PSMB2P49721 201 aa8.35□□□□□ -1.07
USB1-203ENST00000539737 CD164Q04900 197 aa8.35□□□□□ -1.07
USB1-203ENST00000539737 LCE2CQ5TA81 110 aa8.35□□□□□ -1.07
USB1-203ENST00000539737 LIMD2Q9BT23 127 aa8.35□□□□□ -1.07
USB1-203ENST00000539737 GHRHP01286 108 aa8.34□□□□□ -1.07
USB1-203ENST00000539737 COX6CP09669 75 aa8.34□□□□□ -1.07
USB1-203ENST00000539737 FAM218AQ96MZ4 157 aa8.34□□□□□ -1.07
USB1-203ENST00000539737 HRCT1Q6UXD1 115 aa8.32□□□□□ -1.08
USB1-203ENST00000539737 Q6JHZ5 121 aa8.31□□□□□ -1.08
USB1-203ENST00000539737 SNHG12Q9BXW3 62 aa8.31□□□□□ -1.08
USB1-203ENST00000539737 IGLV8-61A0A075B6I0 122 aa8.3□□□□□ -1.08
USB1-203ENST00000539737 DNAL4O96015 105 aa8.3□□□□□ -1.08
USB1-203ENST00000539737 SEC61BP60468 96 aaKnown RBP8.3□□□□□ -1.08
USB1-203ENST00000539737 CLEC2BQ92478 149 aa8.29□□□□□ -1.08
USB1-203ENST00000539737 KRTAP19-2Q3LHN2 52 aa8.28□□□□□ -1.08
USB1-203ENST00000539737 H3BQ85 93 aa8.26□□□□□ -1.09
USB1-203ENST00000539737 Q5XG85 94 aa8.26□□□□□ -1.09
USB1-203ENST00000539737 MT1HP80294 61 aa8.25□□□□□ -1.09
USB1-203ENST00000539737 IGFL1Q6UW32 110 aa8.25□□□□□ -1.09
USB1-203ENST00000539737 ORMDL1Q9P0S3 153 aa8.25□□□□□ -1.09
USB1-203ENST00000539737 A0A0G2JQZ4 141 aa8.24□□□□□ -1.09
USB1-203ENST00000539737 SCGB1C2P0DMR2 95 aa8.24□□□□□ -1.09
USB1-203ENST00000539737 FABP2P12104 132 aa8.24□□□□□ -1.09
USB1-203ENST00000539737 H3BUT2 72 aa8.23□□□□□ -1.09
USB1-203ENST00000539737 NDUFV3P56181 108 aaKnown RBP8.23□□□□□ -1.09
USB1-203ENST00000539737 TCL1BO95988 128 aa8.22□□□□□ -1.09
USB1-203ENST00000539737 TRACP01848 142 aa8.22□□□□□ -1.09
USB1-203ENST00000539737 LST1O00453 97 aa8.21□□□□□ -1.1
USB1-203ENST00000539737 XP32Q5T750 250 aa8.21□□□□□ -1.1
USB1-203ENST00000539737 TRBV7-7A0A0K0K1E9 115 aa8.2□□□□□ -1.1
USB1-203ENST00000539737 H3BMG7 143 aa8.19□□□□□ -1.1
USB1-203ENST00000539737 TMEM256-PLSCR3K7ERE1 68 aa8.19□□□□□ -1.1
USB1-203ENST00000539737 BATFQ16520 125 aa8.19□□□□□ -1.1
USB1-203ENST00000539737 LYRM7Q5U5X0 104 aa8.18□□□□□ -1.1
USB1-203ENST00000539737 Q6Q795 121 aa8.17□□□□□ -1.1
USB1-203ENST00000539737 UBE2V1Q13404 147 aa8.15□□□□□ -1.1
USB1-203ENST00000539737 ATXN8Q156A1 80 aa8.15□□□□□ -1.1
USB1-203ENST00000539737 PCOTHQ58A44 107 aa8.15□□□□□ -1.1
USB1-203ENST00000539737 C1orf195Q5TG92 126 aa8.15□□□□□ -1.1
USB1-203ENST00000539737 NAA38Q9BRA0 125 aaKnown RBP8.15□□□□□ -1.1
USB1-203ENST00000539737 LORP23490 312 aaPredicted RBP8.14□□□□□ -1.11
USB1-203ENST00000539737 TEN1Q86WV5 123 aa8.14□□□□□ -1.11
USB1-203ENST00000539737 SS18L2Q9UHA2 77 aa8.14□□□□□ -1.11
USB1-203ENST00000539737 KRTAP10-6P60371 365 aaPredicted RBP8.13□□□□□ -1.11
USB1-203ENST00000539737 FLGP20930 4061 aaPredicted RBP8.11□□□□□ -1.11
USB1-203ENST00000539737 C9orf92A6NGG3 77 aa8.11□□□□□ -1.11
USB1-203ENST00000539737 ANKRD29Q8N6D5 301 aa8.11□□□□□ -1.11
USB1-203ENST00000539737 A0A1B0GV72 72 aa8.1□□□□□ -1.11
USB1-203ENST00000539737 TRBV20-1A0A075B6N2 111 aa8.09□□□□□ -1.11
USB1-203ENST00000539737 A0A087WSZ3 146 aa8.08□□□□□ -1.12
USB1-203ENST00000539737 BAALC-AS2P0C853 105 aa8.08□□□□□ -1.12
USB1-203ENST00000539737 TRBV7-4A0A0J9YYF1 115 aa8.07□□□□□ -1.12
USB1-203ENST00000539737 A0A1W2PNM2 257 aa8.07□□□□□ -1.12
USB1-203ENST00000539737 C9orf118A6NHY6 69 aa8.07□□□□□ -1.12
USB1-203ENST00000539737 TAX1BP3O14907 124 aa8.06□□□□□ -1.12
USB1-203ENST00000539737 RBM3P98179 157 aaKnown RBP8.06□□□□□ -1.12
USB1-203ENST00000539737 DSCR8Q96T75 97 aa8.05□□□□□ -1.12
USB1-203ENST00000539737 CCKP06307 115 aa8.04□□□□□ -1.12
USB1-203ENST00000539737 A0A1W2PPM0 123 aa8.03□□□□□ -1.12
USB1-203ENST00000539737 JMJD7-PLA2G4BH0Y9G9 81 aa8.02□□□□□ -1.13
USB1-203ENST00000539737 C9JAW5 83 aa8.01□□□□□ -1.13
USB1-203ENST00000539737 M0R2T5 61 aa8.01□□□□□ -1.13
USB1-203ENST00000539737 COL5A1-AS1Q5SY13 56 aa8□□□□□ -1.13
USB1-203ENST00000539737 C21orf62-AS1Q17RA5 79 aa7.99□□□□□ -1.13
USB1-203ENST00000539737 VPS25Q9BRG1 176 aa7.99□□□□□ -1.13
USB1-203ENST00000539737 H3BT86 120 aa7.97□□□□□ -1.13
USB1-203ENST00000539737 Q96NJ1 140 aa7.97□□□□□ -1.13
USB1-203ENST00000539737 PDE6GP18545 87 aa7.96□□□□□ -1.14
USB1-203ENST00000539737 LOC110117498A0A087WWA1 95 aa7.95□□□□□ -1.14
USB1-203ENST00000539737 KRTAP9-7A8MTY7 169 aa7.95□□□□□ -1.14
USB1-203ENST00000539737 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.95□□□□□ -1.14
USB1-203ENST00000539737 SIGMAR1Q99720 223 aa7.95□□□□□ -1.14
USB1-203ENST00000539737 SPCS1Q9Y6A9 102 aa7.95□□□□□ -1.14
USB1-203ENST00000539737 SSPOA2VEC9 5147 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms