RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 IGLV5-48A0A075B6I7 105 aa4.16□□□□□ -1.74
LSAMP-207ENST00000539563 ZNF462Q96JM2 2506 aa4.15□□□□□ -1.74
LSAMP-207ENST00000539563 DSPP15924 2871 aaKnown RBP4.15□□□□□ -1.75
LSAMP-207ENST00000539563 CRYBG3Q68DQ2 2970 aa4.15□□□□□ -1.75
LSAMP-207ENST00000539563 CSMD2Q7Z408 3487 aa4.15□□□□□ -1.75
LSAMP-207ENST00000539563 SMR3BP02814 79 aaPredicted RBP4.15□□□□□ -1.75
LSAMP-207ENST00000539563 ACANP16112 2415 aa4.14□□□□□ -1.75
LSAMP-207ENST00000539563 A0A1W2PNM2 257 aa4.14□□□□□ -1.75
LSAMP-207ENST00000539563 KRTAP1-1Q07627 177 aa4.14□□□□□ -1.75
LSAMP-207ENST00000539563 ANAPC11Q9NYG5 84 aa4.14□□□□□ -1.75
LSAMP-207ENST00000539563 AKAP9Q99996 3911 aa4.14□□□□□ -1.75
LSAMP-207ENST00000539563 CHD8Q9HCK8 2581 aa4.13□□□□□ -1.75
LSAMP-207ENST00000539563 FAM104AQ969W3 186 aa4.13□□□□□ -1.75
LSAMP-207ENST00000539563 CASC10Q5T4H9 136 aa4.13□□□□□ -1.75
LSAMP-207ENST00000539563 A0A0G2JQZ4 141 aa4.13□□□□□ -1.75
LSAMP-207ENST00000539563 CELSR2Q9HCU4 2923 aa4.12□□□□□ -1.75
LSAMP-207ENST00000539563 SVEP1Q4LDE5 3571 aa4.12□□□□□ -1.75
LSAMP-207ENST00000539563 MTORP42345 2549 aa4.12□□□□□ -1.75
LSAMP-207ENST00000539563 ZNF469Q96JG9 3925 aaPredicted RBP4.1□□□□□ -1.75
LSAMP-207ENST00000539563 CDC42SE1Q9NRR8 79 aa4.1□□□□□ -1.75
LSAMP-207ENST00000539563 KTN1-AS1Q86SY8 53 aa4.09□□□□□ -1.75
LSAMP-207ENST00000539563 FAM229BQ4G0N7 80 aa4.09□□□□□ -1.75
LSAMP-207ENST00000539563 WIPF1O43516 503 aa4.09□□□□□ -1.75
LSAMP-207ENST00000539563 OCR1Q9BZK8 76 aa4.09□□□□□ -1.76
LSAMP-207ENST00000539563 LCA10Q71F78 164 aa4.08□□□□□ -1.76
LSAMP-207ENST00000539563 AKAP13Q12802 2813 aa4.08□□□□□ -1.76
LSAMP-207ENST00000539563 CEP295Q9C0D2 2601 aa4.07□□□□□ -1.76
LSAMP-207ENST00000539563 TNP2Q05952 138 aa4.07□□□□□ -1.76
LSAMP-207ENST00000539563 Q1T7F1 81 aa4.07□□□□□ -1.76
LSAMP-207ENST00000539563 CUBNO60494 3623 aa4.07□□□□□ -1.76
LSAMP-207ENST00000539563 POLQO75417 2590 aa4.07□□□□□ -1.76
LSAMP-207ENST00000539563 Q8N1X5 172 aa4.07□□□□□ -1.76
LSAMP-207ENST00000539563 IGLV7-46A0A075B6I9 117 aa4.06□□□□□ -1.76
LSAMP-207ENST00000539563 CFAP46Q8IYW2 2715 aa4.06□□□□□ -1.76
LSAMP-207ENST00000539563 Q6ZSA8 131 aa4.06□□□□□ -1.76
LSAMP-207ENST00000539563 PRRC2CQ9Y520 2896 aaKnown RBP4.06□□□□□ -1.76
LSAMP-207ENST00000539563 PLAC8Q9NZF1 115 aa4.05□□□□□ -1.76
LSAMP-207ENST00000539563 ASH1LQ9NR48 2969 aaKnown RBP4.04□□□□□ -1.76
LSAMP-207ENST00000539563 FLG2Q5D862 2391 aaPredicted RBP4.04□□□□□ -1.76
LSAMP-207ENST00000539563 A0A0D9SG42 100 aa4.04□□□□□ -1.76
LSAMP-207ENST00000539563 FASNP49327 2511 aaKnown RBP4.04□□□□□ -1.76
LSAMP-207ENST00000539563 LINC01554Q52M75 96 aa4.04□□□□□ -1.76
LSAMP-207ENST00000539563 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.04□□□□□ -1.76
LSAMP-207ENST00000539563 SPRR1AP35321 89 aa4.03□□□□□ -1.76
LSAMP-207ENST00000539563 PRR26Q8N8Z3 221 aa4.02□□□□□ -1.77
LSAMP-207ENST00000539563 LUZP6Q538Z0 58 aa4.01□□□□□ -1.77
LSAMP-207ENST00000539563 A0A1B0GU33 70 aa4.01□□□□□ -1.77
LSAMP-207ENST00000539563 HRES1P13985 223 aa4□□□□□ -1.77
LSAMP-207ENST00000539563 Q75L30 129 aa4□□□□□ -1.77
LSAMP-207ENST00000539563 HRNRQ86YZ3 2850 aaPredicted RBP4□□□□□ -1.77
LSAMP-207ENST00000539563 KMT2BQ9UMN6 2715 aaPredicted RBP4□□□□□ -1.77
LSAMP-207ENST00000539563 ZCCHC13Q8WW36 166 aaKnown RBP4□□□□□ -1.77
LSAMP-207ENST00000539563 SPRR1BP22528 89 aa3.99□□□□□ -1.77
LSAMP-207ENST00000539563 MMP24-AS1A0A0U1RRL7 71 aa3.99□□□□□ -1.77
LSAMP-207ENST00000539563 DMAC1Q96GE9 116 aa3.99□□□□□ -1.77
LSAMP-207ENST00000539563 TENM4Q6N022 2769 aa3.98□□□□□ -1.77
LSAMP-207ENST00000539563 S4R3F8 94 aa3.98□□□□□ -1.77
LSAMP-207ENST00000539563 USP24Q9UPU5 2620 aa3.97□□□□□ -1.77
LSAMP-207ENST00000539563 LINC00483Q53H64 154 aa3.97□□□□□ -1.77
LSAMP-207ENST00000539563 CAMK2N1Q7Z7J9 78 aa3.97□□□□□ -1.77
LSAMP-207ENST00000539563 LINC01558Q9Y6Z2 57 aa3.97□□□□□ -1.77
LSAMP-207ENST00000539563 CSAG1Q6PB30 78 aa3.96□□□□□ -1.78
LSAMP-207ENST00000539563 LINC00472Q9H8W2 130 aa3.96□□□□□ -1.78
LSAMP-207ENST00000539563 CELSR1Q9NYQ6 3014 aa3.95□□□□□ -1.78
LSAMP-207ENST00000539563 FBN2P35556 2912 aa3.95□□□□□ -1.78
LSAMP-207ENST00000539563 ITPR3Q14573 2671 aa3.95□□□□□ -1.78
LSAMP-207ENST00000539563 M0R2T5 61 aa3.95□□□□□ -1.78
LSAMP-207ENST00000539563 Q8NDZ9 215 aa3.94□□□□□ -1.78
LSAMP-207ENST00000539563 FLNAP21333 2647 aaKnown RBP3.94□□□□□ -1.78
LSAMP-207ENST00000539563 Q5W150 140 aa3.94□□□□□ -1.78
LSAMP-207ENST00000539563 LRBAP50851 2863 aa3.93□□□□□ -1.78
LSAMP-207ENST00000539563 SEC61BP60468 96 aaKnown RBP3.93□□□□□ -1.78
LSAMP-207ENST00000539563 Q8N9P0 234 aaPredicted RBP3.93□□□□□ -1.78
LSAMP-207ENST00000539563 KRTAP26-1Q6PEX3 210 aa3.93□□□□□ -1.78
LSAMP-207ENST00000539563 ANK3Q12955 4377 aaKnown RBP3.91□□□□□ -1.78
LSAMP-207ENST00000539563 ADGRG4Q8IZF6 3080 aa3.91□□□□□ -1.78
LSAMP-207ENST00000539563 SPINK7P58062 85 aa3.91□□□□□ -1.78
LSAMP-207ENST00000539563 UBR5O95071 2799 aaPredicted RBP3.91□□□□□ -1.78
LSAMP-207ENST00000539563 COL12A1Q99715 3063 aa3.9□□□□□ -1.79
LSAMP-207ENST00000539563 FP248Q71RG6 208 aaPredicted RBP3.88□□□□□ -1.79
LSAMP-207ENST00000539563 LCE6AA0A183 80 aa3.88□□□□□ -1.79
LSAMP-207ENST00000539563 Q5VSD8 79 aa3.88□□□□□ -1.79
LSAMP-207ENST00000539563 Q5XG85 94 aa3.87□□□□□ -1.79
LSAMP-207ENST00000539563 KRTAP1-5Q9BYS1 174 aa3.87□□□□□ -1.79
LSAMP-207ENST00000539563 R4GN34 69 aa3.87□□□□□ -1.79
LSAMP-207ENST00000539563 Q5VV11 94 aa3.87□□□□□ -1.79
LSAMP-207ENST00000539563 KRTAP10-1P60331 282 aa3.86□□□□□ -1.79
LSAMP-207ENST00000539563 UTP20O75691 2785 aaKnown RBP3.86□□□□□ -1.79
LSAMP-207ENST00000539563 Q6ZR54 194 aa3.86□□□□□ -1.79
LSAMP-207ENST00000539563 TACC2O95359 2948 aa3.86□□□□□ -1.79
LSAMP-207ENST00000539563 HELZ2Q9BYK8 2649 aaKnown RBP3.86□□□□□ -1.79
LSAMP-207ENST00000539563 OXTP01178 125 aa3.85□□□□□ -1.79
LSAMP-207ENST00000539563 KRTAP4-16G5E9R7 235 aaPredicted RBP3.84□□□□□ -1.79
LSAMP-207ENST00000539563 ANK2Q01484 3957 aa3.84□□□□□ -1.79
LSAMP-207ENST00000539563 EPG5Q9HCE0 2579 aa3.84□□□□□ -1.79
LSAMP-207ENST00000539563 DNAH3Q8TD57 4116 aa3.84□□□□□ -1.79
LSAMP-207ENST00000539563 CYSTM1Q9H1C7 97 aa3.84□□□□□ -1.8
LSAMP-207ENST00000539563 RPL37P61927 97 aaKnown RBP3.83□□□□□ -1.8
LSAMP-207ENST00000539563 ATRQ13535 2644 aa3.83□□□□□ -1.8
LSAMP-207ENST00000539563 KRTAP10-2P60368 255 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms