RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 NOTCH1P46531 2555 aa3.75□□□□□ -1.81
TNFRSF1A-206ENST00000535038 TRAV7A0A075B6U4 112 aa3.74□□□□□ -1.81
TNFRSF1A-206ENST00000535038 LOC107984640A0A0U1RRK4 108 aa3.74□□□□□ -1.81
TNFRSF1A-206ENST00000535038 TMEM258P61165 79 aa3.74□□□□□ -1.81
TNFRSF1A-206ENST00000535038 Q6ZRX8 168 aa3.74□□□□□ -1.81
TNFRSF1A-206ENST00000535038 SMIM20Q8N5G0 67 aa3.74□□□□□ -1.81
TNFRSF1A-206ENST00000535038 SVIPQ8NHG7 77 aa3.74□□□□□ -1.81
TNFRSF1A-206ENST00000535038 Q9BRP9 147 aa3.74□□□□□ -1.81
TNFRSF1A-206ENST00000535038 DNAH2Q9P225 4427 aa3.74□□□□□ -1.81
TNFRSF1A-206ENST00000535038 NBEAL1Q6ZS30 2694 aa3.73□□□□□ -1.81
TNFRSF1A-206ENST00000535038 A0A1B0GVY2 172 aa3.73□□□□□ -1.81
TNFRSF1A-206ENST00000535038 A0A1B0GW54 56 aa3.73□□□□□ -1.81
TNFRSF1A-206ENST00000535038 C14orf177Q52M58 125 aa3.73□□□□□ -1.81
TNFRSF1A-206ENST00000535038 RMI2Q96E14 147 aa3.73□□□□□ -1.81
TNFRSF1A-206ENST00000535038 DHRS4-AS1Q9P1J3 65 aa3.73□□□□□ -1.81
TNFRSF1A-206ENST00000535038 FAM168BA1KXE4 195 aa3.72□□□□□ -1.81
TNFRSF1A-206ENST00000535038 EPM2AB3EWF7 344 aa3.72□□□□□ -1.81
TNFRSF1A-206ENST00000535038 NKAPP1Q8N9T2 125 aa3.72□□□□□ -1.81
TNFRSF1A-206ENST00000535038 DNAH8Q96JB1 4490 aa3.72□□□□□ -1.81
TNFRSF1A-206ENST00000535038 LYSTQ99698 3801 aa3.72□□□□□ -1.81
TNFRSF1A-206ENST00000535038 A0A1W2PNM2 257 aa3.71□□□□□ -1.82
TNFRSF1A-206ENST00000535038 IGKV4-1P06312 121 aa3.71□□□□□ -1.82
TNFRSF1A-206ENST00000535038 CNBPP62633 177 aaKnown RBP3.71□□□□□ -1.82
TNFRSF1A-206ENST00000535038 HAMPP81172 84 aa3.71□□□□□ -1.82
TNFRSF1A-206ENST00000535038 KLKP1Q107X0 134 aa3.71□□□□□ -1.82
TNFRSF1A-206ENST00000535038 LCE3CQ5T5A8 94 aa3.71□□□□□ -1.82
TNFRSF1A-206ENST00000535038 DPH3Q96FX2 82 aa3.71□□□□□ -1.82
TNFRSF1A-206ENST00000535038 SPRR4Q96PI1 79 aa3.71□□□□□ -1.82
TNFRSF1A-206ENST00000535038 PRKDCP78527 4128 aaKnown RBP3.71□□□□□ -1.82
TNFRSF1A-206ENST00000535038 COL6A5A8TX70 2615 aa3.7□□□□□ -1.82
TNFRSF1A-206ENST00000535038 J3KT08 172 aa3.7□□□□□ -1.82
TNFRSF1A-206ENST00000535038 ERC2-IT1O76042 136 aa3.7□□□□□ -1.82
TNFRSF1A-206ENST00000535038 OXTP01178 125 aa3.7□□□□□ -1.82
TNFRSF1A-206ENST00000535038 IGLV8-61A0A075B6I0 122 aa3.69□□□□□ -1.82
TNFRSF1A-206ENST00000535038 H7BZZ5 65 aa3.69□□□□□ -1.82
TNFRSF1A-206ENST00000535038 MRPL55Q7Z7F7 128 aaKnown RBP3.69□□□□□ -1.82
TNFRSF1A-206ENST00000535038 ST20-AS1Q8NBB2 130 aa3.69□□□□□ -1.82
TNFRSF1A-206ENST00000535038 Q8NBF4 154 aa3.69□□□□□ -1.82
TNFRSF1A-206ENST00000535038 APLNQ9ULZ1 77 aa3.69□□□□□ -1.82
TNFRSF1A-206ENST00000535038 STAB2Q8WWQ8 2551 aa3.69□□□□□ -1.82
TNFRSF1A-206ENST00000535038 HECTD4Q9Y4D8 3996 aa3.69□□□□□ -1.82
TNFRSF1A-206ENST00000535038 LCE6AA0A183 80 aa3.68□□□□□ -1.82
TNFRSF1A-206ENST00000535038 ETDCA0A1B0GVM5 59 aa3.68□□□□□ -1.82
TNFRSF1A-206ENST00000535038 RPL37AP8A6NKH3 93 aa3.68□□□□□ -1.82
TNFRSF1A-206ENST00000535038 C16orf90A8MZG2 172 aa3.68□□□□□ -1.82
TNFRSF1A-206ENST00000535038 PRB2P02812 416 aaPredicted RBP3.68□□□□□ -1.82
TNFRSF1A-206ENST00000535038 C20orf197Q8N268 126 aa3.68□□□□□ -1.82
TNFRSF1A-206ENST00000535038 OCR1Q9BZK8 76 aa3.68□□□□□ -1.82
TNFRSF1A-206ENST00000535038 A0A096LNI7 61 aa3.67□□□□□ -1.82
TNFRSF1A-206ENST00000535038 SPRR1BP22528 89 aa3.67□□□□□ -1.82
TNFRSF1A-206ENST00000535038 REG3GQ6UW15 175 aa3.67□□□□□ -1.82
TNFRSF1A-206ENST00000535038 SCXQ7RTU7 201 aa3.67□□□□□ -1.82
TNFRSF1A-206ENST00000535038 CSMD3Q7Z407 3707 aa3.67□□□□□ -1.82
TNFRSF1A-206ENST00000535038 MGAM2Q2M2H8 2515 aa3.67□□□□□ -1.82
TNFRSF1A-206ENST00000535038 DNAH11Q96DT5 4516 aa3.67□□□□□ -1.82
TNFRSF1A-206ENST00000535038 STARD9Q9P2P6 4700 aa3.66□□□□□ -1.82
TNFRSF1A-206ENST00000535038 A0A1W2PNN7 141 aa3.66□□□□□ -1.82
TNFRSF1A-206ENST00000535038 H0Y9J4 135 aa3.66□□□□□ -1.82
TNFRSF1A-206ENST00000535038 DSCR10P59022 87 aa3.66□□□□□ -1.82
TNFRSF1A-206ENST00000535038 NREPQ16612 68 aa3.66□□□□□ -1.82
TNFRSF1A-206ENST00000535038 C1orf137Q5JT78 98 aa3.66□□□□□ -1.82
TNFRSF1A-206ENST00000535038 FAM19A5Q7Z5A7 132 aaPredicted RBP3.66□□□□□ -1.82
TNFRSF1A-206ENST00000535038 A0A0U1RQV1 116 aa3.65□□□□□ -1.83
TNFRSF1A-206ENST00000535038 LRCOL1A6NCL2 159 aa3.65□□□□□ -1.83
TNFRSF1A-206ENST00000535038 C3orf84H3BNL1 204 aa3.65□□□□□ -1.83
TNFRSF1A-206ENST00000535038 BPY2O14599 106 aa3.65□□□□□ -1.83
TNFRSF1A-206ENST00000535038 FUSP35637 526 aaKnown RBP eCLIP3.65□□□□□ -1.83
TNFRSF1A-206ENST00000535038 KRTAP11-1Q8IUC1 163 aa3.65□□□□□ -1.83
TNFRSF1A-206ENST00000535038 Q8N9L7 120 aa3.65□□□□□ -1.83
TNFRSF1A-206ENST00000535038 DEFB105AQ8NG35 78 aa3.65□□□□□ -1.83
TNFRSF1A-206ENST00000535038 FAM236DA0A1B0GTK5 79 aa3.64□□□□□ -1.83
TNFRSF1A-206ENST00000535038 NDUFC1O43677 76 aa3.64□□□□□ -1.83
TNFRSF1A-206ENST00000535038 FAM236CP0DP71 79 aa3.64□□□□□ -1.83
TNFRSF1A-206ENST00000535038 Q6ZRN7 208 aaPredicted RBP3.64□□□□□ -1.83
TNFRSF1A-206ENST00000535038 KRTAP13-1Q8IUC0 172 aa3.64□□□□□ -1.83
TNFRSF1A-206ENST00000535038 B9D2Q9BPU9 175 aa3.64□□□□□ -1.83
TNFRSF1A-206ENST00000535038 DNAH5Q8TE73 4624 aa3.63□□□□□ -1.83
TNFRSF1A-206ENST00000535038 Q5XG85 94 aa3.63□□□□□ -1.83
TNFRSF1A-206ENST00000535038 IGFL1Q6UW32 110 aa3.63□□□□□ -1.83
TNFRSF1A-206ENST00000535038 C9orf163Q8N9P6 203 aa3.63□□□□□ -1.83
TNFRSF1A-206ENST00000535038 TMEM254Q8TBM7 123 aa3.63□□□□□ -1.83
TNFRSF1A-206ENST00000535038 ZCCHC13Q8WW36 166 aaKnown RBP3.63□□□□□ -1.83
TNFRSF1A-206ENST00000535038 SERP1Q9Y6X1 66 aa3.63□□□□□ -1.83
TNFRSF1A-206ENST00000535038 COL7A1Q02388 2944 aa3.63□□□□□ -1.83
TNFRSF1A-206ENST00000535038 ALMS1Q8TCU4 4167 aa3.62□□□□□ -1.83
TNFRSF1A-206ENST00000535038 ATP5EP56381 51 aaPredicted RBP3.62□□□□□ -1.83
TNFRSF1A-206ENST00000535038 UBE2BP63146 152 aa3.62□□□□□ -1.83
TNFRSF1A-206ENST00000535038 SNURFQ9Y675 71 aa3.62□□□□□ -1.83
TNFRSF1A-206ENST00000535038 F8WEM9 126 aa3.61□□□□□ -1.83
TNFRSF1A-206ENST00000535038 PRLHP81277 87 aa3.61□□□□□ -1.83
TNFRSF1A-206ENST00000535038 PHF5AQ7RTV0 110 aaKnown RBP3.61□□□□□ -1.83
TNFRSF1A-206ENST00000535038 OBSCNQ5VST9 7968 aa3.6□□□□□ -1.83
TNFRSF1A-206ENST00000535038 NBDYA0A0U1RRE5 68 aa3.6□□□□□ -1.83
TNFRSF1A-206ENST00000535038 K7EQZ3 153 aa3.6□□□□□ -1.83
TNFRSF1A-206ENST00000535038 CHTF8P0CG12 524 aa3.6□□□□□ -1.83
TNFRSF1A-206ENST00000535038 PKIGQ9Y2B9 76 aa3.6□□□□□ -1.83
TNFRSF1A-206ENST00000535038 IGKV2-24A0A0C4DH68 120 aa3.59□□□□□ -1.83
TNFRSF1A-206ENST00000535038 A0A0G2JQZ4 141 aa3.59□□□□□ -1.83
TNFRSF1A-206ENST00000535038 PANO1I0J062 215 aa3.59□□□□□ -1.83
TNFRSF1A-206ENST00000535038 KMT2AQ03164 3969 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms