RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 C1orf134Q5TEV5 83 aa1.9□□□□□ -2.11
CSDE1-216ENST00000534389 Q6ZRX8 168 aa1.9□□□□□ -2.11
CSDE1-216ENST00000534389 C15orf56Q8N910 161 aa1.9□□□□□ -2.11
CSDE1-216ENST00000534389 RETNLBQ9BQ08 111 aa1.9□□□□□ -2.11
CSDE1-216ENST00000534389 LINC00472Q9H8W2 130 aa1.9□□□□□ -2.11
CSDE1-216ENST00000534389 ZNF706Q9Y5V0 76 aaPredicted RBP1.9□□□□□ -2.11
CSDE1-216ENST00000534389 A0A087WSZ3 146 aa1.89□□□□□ -2.11
CSDE1-216ENST00000534389 A8MWP4 228 aa1.89□□□□□ -2.11
CSDE1-216ENST00000534389 ZNF861PO60384 105 aa1.89□□□□□ -2.11
CSDE1-216ENST00000534389 P0C880 135 aa1.89□□□□□ -2.11
CSDE1-216ENST00000534389 LELP1Q5T871 98 aa1.89□□□□□ -2.11
CSDE1-216ENST00000534389 KRTAP4-3Q9BYR4 195 aa1.89□□□□□ -2.11
CSDE1-216ENST00000534389 PRO0255Q9UI72 69 aa1.89□□□□□ -2.11
CSDE1-216ENST00000534389 SPENQ96T58 3664 aaKnown RBP1.88□□□□□ -2.11
CSDE1-216ENST00000534389 K7EIL1 84 aa1.88□□□□□ -2.11
CSDE1-216ENST00000534389 CAMK2N2Q96S95 79 aa1.88□□□□□ -2.11
CSDE1-216ENST00000534389 SPG11Q96JI7 2443 aa1.88□□□□□ -2.11
CSDE1-216ENST00000534389 ZFHX4Q86UP3 3567 aa1.88□□□□□ -2.11
CSDE1-216ENST00000534389 CSPG4Q6UVK1 2322 aa1.88□□□□□ -2.11
CSDE1-216ENST00000534389 ITPR1Q14643 2758 aa1.87□□□□□ -2.11
CSDE1-216ENST00000534389 DEFB131BA0A096LNP1 70 aa1.87□□□□□ -2.11
CSDE1-216ENST00000534389 IGKV2-24A0A0C4DH68 120 aa1.87□□□□□ -2.11
CSDE1-216ENST00000534389 A0A1B0GVY2 172 aa1.87□□□□□ -2.11
CSDE1-216ENST00000534389 DEFB4AO15263 64 aa1.87□□□□□ -2.11
CSDE1-216ENST00000534389 KRTAP13-3Q3SY46 172 aa1.87□□□□□ -2.11
CSDE1-216ENST00000534389 LCE3CQ5T5A8 94 aa1.87□□□□□ -2.11
CSDE1-216ENST00000534389 ACACAQ13085 2346 aa1.86□□□□□ -2.11
CSDE1-216ENST00000534389 LRBAP50851 2863 aa1.86□□□□□ -2.11
CSDE1-216ENST00000534389 CHD6Q8TD26 2715 aa1.86□□□□□ -2.11
CSDE1-216ENST00000534389 LOC400499M0QZD8 3231 aa1.86□□□□□ -2.11
CSDE1-216ENST00000534389 ADGRG4Q8IZF6 3080 aa1.86□□□□□ -2.11
CSDE1-216ENST00000534389 GVINP1Q7Z2Y8 2422 aa1.86□□□□□ -2.11
CSDE1-216ENST00000534389 IGHV6-1A0A0B4J1U7 121 aa1.86□□□□□ -2.11
CSDE1-216ENST00000534389 ROMO1P60602 79 aa1.86□□□□□ -2.11
CSDE1-216ENST00000534389 Q96NJ1 140 aa1.86□□□□□ -2.11
CSDE1-216ENST00000534389 EYSQ5T1H1 3165 aa1.86□□□□□ -2.11
CSDE1-216ENST00000534389 FN1P02751 2386 aaKnown RBP1.85□□□□□ -2.11
CSDE1-216ENST00000534389 ANKRD17O75179 2603 aaKnown RBP1.85□□□□□ -2.11
CSDE1-216ENST00000534389 DMXL1Q9Y485 3027 aa1.85□□□□□ -2.11
CSDE1-216ENST00000534389 CMC4P56277 68 aaPredicted RBP1.85□□□□□ -2.11
CSDE1-216ENST00000534389 MIR22HGQ0VDD5 57 aa1.85□□□□□ -2.11
CSDE1-216ENST00000534389 CASC10Q5T4H9 136 aa1.85□□□□□ -2.11
CSDE1-216ENST00000534389 Q5W150 140 aa1.85□□□□□ -2.11
CSDE1-216ENST00000534389 KRTAP11-1Q8IUC1 163 aa1.85□□□□□ -2.11
CSDE1-216ENST00000534389 C8orf17Q9NRJ1 99 aa1.85□□□□□ -2.11
CSDE1-216ENST00000534389 OTOGLQ3ZCN5 2332 aa1.85□□□□□ -2.11
CSDE1-216ENST00000534389 RIF1Q5UIP0 2472 aaKnown RBP1.84□□□□□ -2.11
CSDE1-216ENST00000534389 TLX1NBP0CAT3 122 aa1.84□□□□□ -2.11
CSDE1-216ENST00000534389 HTN3P15516 51 aa1.84□□□□□ -2.11
CSDE1-216ENST00000534389 KRTAP10-3P60369 221 aa1.84□□□□□ -2.11
CSDE1-216ENST00000534389 KRTAP25-1Q3LHN0 102 aa1.84□□□□□ -2.11
CSDE1-216ENST00000534389 ANAPC11Q9NYG5 84 aa1.84□□□□□ -2.11
CSDE1-216ENST00000534389 ANKRD11Q6UB99 2663 aaPredicted RBP1.84□□□□□ -2.11
CSDE1-216ENST00000534389 JMJD1CQ15652 2540 aa1.84□□□□□ -2.12
CSDE1-216ENST00000534389 MAP1AP78559 2803 aaPredicted RBP1.84□□□□□ -2.12
CSDE1-216ENST00000534389 TLN1Q9Y490 2541 aaKnown RBP1.83□□□□□ -2.12
CSDE1-216ENST00000534389 NBASA2RRP1 2371 aa1.83□□□□□ -2.12
CSDE1-216ENST00000534389 SPRR1BP22528 89 aa1.83□□□□□ -2.12
CSDE1-216ENST00000534389 PRLHP81277 87 aa1.83□□□□□ -2.12
CSDE1-216ENST00000534389 DMAC1Q96GE9 116 aa1.83□□□□□ -2.12
CSDE1-216ENST00000534389 CCL19Q99731 98 aa1.83□□□□□ -2.12
CSDE1-216ENST00000534389 TP53AIP1Q9HCN2 124 aa1.83□□□□□ -2.12
CSDE1-216ENST00000534389 BOD1L1Q8NFC6 3051 aa1.83□□□□□ -2.12
CSDE1-216ENST00000534389 PTPN13Q12923 2485 aa1.82□□□□□ -2.12
CSDE1-216ENST00000534389 COL12A1Q99715 3063 aa1.82□□□□□ -2.12
CSDE1-216ENST00000534389 A0A1B0GU69 56 aa1.82□□□□□ -2.12
CSDE1-216ENST00000534389 A8MUU9 505 aa1.82□□□□□ -2.12
CSDE1-216ENST00000534389 KRTAP1-4P0C5Y4 121 aa1.82□□□□□ -2.12
CSDE1-216ENST00000534389 RELNP78509 3460 aa1.82□□□□□ -2.12
CSDE1-216ENST00000534389 SETXQ7Z333 2677 aaKnown RBP1.82□□□□□ -2.12
CSDE1-216ENST00000534389 IGF2RP11717 2491 aa1.81□□□□□ -2.12
CSDE1-216ENST00000534389 CELSR1Q9NYQ6 3014 aa1.81□□□□□ -2.12
CSDE1-216ENST00000534389 CHTF8P0CG12 524 aa1.81□□□□□ -2.12
CSDE1-216ENST00000534389 ACYP2P14621 99 aa1.81□□□□□ -2.12
CSDE1-216ENST00000534389 DEFB135Q30KP9 77 aa1.81□□□□□ -2.12
CSDE1-216ENST00000534389 ZFYVE26Q68DK2 2539 aa1.81□□□□□ -2.12
CSDE1-216ENST00000534389 TLN2Q9Y4G6 2542 aa1.81□□□□□ -2.12
CSDE1-216ENST00000534389 NCOR2Q9Y618 2525 aa1.8□□□□□ -2.12
CSDE1-216ENST00000534389 A0A096LNI7 61 aa1.8□□□□□ -2.12
CSDE1-216ENST00000534389 A0A1B0GVX0 72 aa1.8□□□□□ -2.12
CSDE1-216ENST00000534389 UQCR11O14957 56 aa1.8□□□□□ -2.12
CSDE1-216ENST00000534389 IGLV7-43P04211 117 aa1.8□□□□□ -2.12
CSDE1-216ENST00000534389 LINC00483Q53H64 154 aa1.8□□□□□ -2.12
CSDE1-216ENST00000534389 LINC00304Q8N9R0 145 aa1.8□□□□□ -2.12
CSDE1-216ENST00000534389 MRPL34Q9BQ48 92 aaKnown RBP1.8□□□□□ -2.12
CSDE1-216ENST00000534389 F8P00451 2351 aa1.8□□□□□ -2.12
CSDE1-216ENST00000534389 HIVEP3Q5T1R4 2406 aa1.8□□□□□ -2.12
CSDE1-216ENST00000534389 ASH1LQ9NR48 2969 aaKnown RBP1.8□□□□□ -2.12
CSDE1-216ENST00000534389 CRIPTQ9P021 101 aa1.79□□□□□ -2.12
CSDE1-216ENST00000534389 BSNQ9UPA5 3926 aa1.79□□□□□ -2.12
CSDE1-216ENST00000534389 SPTBN4Q9H254 2564 aa1.79□□□□□ -2.12
CSDE1-216ENST00000534389 APCP25054 2843 aa1.79□□□□□ -2.12
CSDE1-216ENST00000534389 OTOGQ6ZRI0 2925 aa1.78□□□□□ -2.12
CSDE1-216ENST00000534389 KRTAP9-6A8MVA2 160 aa1.78□□□□□ -2.12
CSDE1-216ENST00000534389 H0YAA0 97 aa1.78□□□□□ -2.12
CSDE1-216ENST00000534389 SPART-AS1P0CW21 52 aa1.78□□□□□ -2.12
CSDE1-216ENST00000534389 LINC01556Q5JQF7 62 aa1.78□□□□□ -2.12
CSDE1-216ENST00000534389 SVEP1Q4LDE5 3571 aa1.78□□□□□ -2.12
CSDE1-216ENST00000534389 ATMQ13315 3056 aa1.78□□□□□ -2.12
CSDE1-216ENST00000534389 ASPMQ8IZT6 3477 aa1.78□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms