RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 FAM19A1Q7Z5A9 133 aa5.18□□□□□ -1.58
NEDD8-207ENST00000533242 CYSTM1Q9H1C7 97 aa5.18□□□□□ -1.58
NEDD8-207ENST00000533242 FAM168BA1KXE4 195 aa5.17□□□□□ -1.58
NEDD8-207ENST00000533242 M0R378 163 aa5.17□□□□□ -1.58
NEDD8-207ENST00000533242 KRTAP7-1Q8IUC3 87 aa5.17□□□□□ -1.58
NEDD8-207ENST00000533242 LOC110117498A0A087WWA1 95 aa5.16□□□□□ -1.58
NEDD8-207ENST00000533242 LCE2AQ5TA79 106 aaPredicted RBP5.15□□□□□ -1.58
NEDD8-207ENST00000533242 USP17L23D6RBM5 183 aa5.15□□□□□ -1.59
NEDD8-207ENST00000533242 C3orf22Q8N5N4 141 aa5.15□□□□□ -1.59
NEDD8-207ENST00000533242 C7orf33Q8WU49 177 aa5.15□□□□□ -1.59
NEDD8-207ENST00000533242 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.14□□□□□ -1.59
NEDD8-207ENST00000533242 C9orf163Q8N9P6 203 aa5.14□□□□□ -1.59
NEDD8-207ENST00000533242 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.14□□□□□ -1.59
NEDD8-207ENST00000533242 TRBV7-4A0A0J9YYF1 115 aa5.14□□□□□ -1.59
NEDD8-207ENST00000533242 RPL37AP8A6NKH3 93 aa5.14□□□□□ -1.59
NEDD8-207ENST00000533242 UQCRQO14949 82 aa5.13□□□□□ -1.59
NEDD8-207ENST00000533242 COX7CP15954 63 aa5.13□□□□□ -1.59
NEDD8-207ENST00000533242 C9orf153Q5TBE3 101 aa5.13□□□□□ -1.59
NEDD8-207ENST00000533242 Q6ZVQ6 151 aa5.13□□□□□ -1.59
NEDD8-207ENST00000533242 DSCR8Q96T75 97 aa5.13□□□□□ -1.59
NEDD8-207ENST00000533242 TRBV7-6A0A0J9YX20 115 aa5.13□□□□□ -1.59
NEDD8-207ENST00000533242 ATOX1O00244 68 aa5.13□□□□□ -1.59
NEDD8-207ENST00000533242 UBL5Q9BZL1 73 aa5.13□□□□□ -1.59
NEDD8-207ENST00000533242 KCNQ1DNQ9H478 68 aa5.12□□□□□ -1.59
NEDD8-207ENST00000533242 PANO1I0J062 215 aa5.12□□□□□ -1.59
NEDD8-207ENST00000533242 LINC01547P58512 204 aaPredicted RBP5.12□□□□□ -1.59
NEDD8-207ENST00000533242 NKAPP1Q8N9T2 125 aa5.11□□□□□ -1.59
NEDD8-207ENST00000533242 Q9BRP9 147 aa5.11□□□□□ -1.59
NEDD8-207ENST00000533242 KRTAP4-16G5E9R7 235 aaPredicted RBP5.11□□□□□ -1.59
NEDD8-207ENST00000533242 TLX1NBP0CAT3 122 aa5.11□□□□□ -1.59
NEDD8-207ENST00000533242 DEFB105AQ8NG35 78 aa5.11□□□□□ -1.59
NEDD8-207ENST00000533242 ATP5EP2Q5VTU8 51 aa5.1□□□□□ -1.59
NEDD8-207ENST00000533242 Q8N377 158 aa5.1□□□□□ -1.59
NEDD8-207ENST00000533242 F8WDY8 70 aa5.09□□□□□ -1.59
NEDD8-207ENST00000533242 IGLV1-50A0A075B6I6 118 aa5.09□□□□□ -1.59
NEDD8-207ENST00000533242 CRYGAP11844 174 aa5.09□□□□□ -1.59
NEDD8-207ENST00000533242 CNBPP62633 177 aaKnown RBP5.09□□□□□ -1.59
NEDD8-207ENST00000533242 FAM19A5Q7Z5A7 132 aaPredicted RBP5.09□□□□□ -1.59
NEDD8-207ENST00000533242 SMIM20Q8N5G0 67 aa5.09□□□□□ -1.59
NEDD8-207ENST00000533242 SERP2Q8N6R1 65 aa5.09□□□□□ -1.59
NEDD8-207ENST00000533242 ST20-AS1Q8NBB2 130 aa5.09□□□□□ -1.59
NEDD8-207ENST00000533242 ERC2-IT1O76042 136 aa5.08□□□□□ -1.6
NEDD8-207ENST00000533242 TNXBP22105 4242 aa5.08□□□□□ -1.6
NEDD8-207ENST00000533242 Q6ZRX8 168 aa5.08□□□□□ -1.6
NEDD8-207ENST00000533242 SPRR1AP35321 89 aa5.07□□□□□ -1.6
NEDD8-207ENST00000533242 SPACA4Q8TDM5 124 aa5.07□□□□□ -1.6
NEDD8-207ENST00000533242 DPH3Q96FX2 82 aa5.07□□□□□ -1.6
NEDD8-207ENST00000533242 PLAC8Q9NZF1 115 aa5.07□□□□□ -1.6
NEDD8-207ENST00000533242 IGLV5-37A0A075B6J1 123 aa5.07□□□□□ -1.6
NEDD8-207ENST00000533242 H3BQ85 93 aa5.07□□□□□ -1.6
NEDD8-207ENST00000533242 PDE6GP18545 87 aa5.07□□□□□ -1.6
NEDD8-207ENST00000533242 Q8N9L7 120 aa5.07□□□□□ -1.6
NEDD8-207ENST00000533242 LRP2P98164 4655 aa5.06□□□□□ -1.6
NEDD8-207ENST00000533242 KRTAP10-8P60410 259 aa5.06□□□□□ -1.6
NEDD8-207ENST00000533242 RNF213Q63HN8 5207 aa5.05□□□□□ -1.6
NEDD8-207ENST00000533242 A0A096LNI7 61 aa5.05□□□□□ -1.6
NEDD8-207ENST00000533242 CHTF8P0CG12 524 aa5.05□□□□□ -1.6
NEDD8-207ENST00000533242 MRPL55Q7Z7F7 128 aaKnown RBP5.05□□□□□ -1.6
NEDD8-207ENST00000533242 CXCL6P80162 114 aa5.05□□□□□ -1.6
NEDD8-207ENST00000533242 IGLV5-48A0A075B6I7 105 aa5.04□□□□□ -1.6
NEDD8-207ENST00000533242 IGKV2-24A0A0C4DH68 120 aa5.04□□□□□ -1.6
NEDD8-207ENST00000533242 A0A0G2JQZ4 141 aa5.04□□□□□ -1.6
NEDD8-207ENST00000533242 A0A1W2PNN7 141 aa5.04□□□□□ -1.6
NEDD8-207ENST00000533242 PRYO14603 147 aa5.04□□□□□ -1.6
NEDD8-207ENST00000533242 LOC107984640A0A0U1RRK4 108 aa5.03□□□□□ -1.6
NEDD8-207ENST00000533242 ETDCA0A1B0GVM5 59 aa5.03□□□□□ -1.6
NEDD8-207ENST00000533242 A0A1W2PNM2 257 aa5.03□□□□□ -1.6
NEDD8-207ENST00000533242 REG3GQ6UW15 175 aa5.03□□□□□ -1.6
NEDD8-207ENST00000533242 KRTAP11-1Q8IUC1 163 aa5.03□□□□□ -1.6
NEDD8-207ENST00000533242 SPINK6Q6UWN8 80 aa5.03□□□□□ -1.6
NEDD8-207ENST00000533242 BPY2O14599 106 aa5.02□□□□□ -1.61
NEDD8-207ENST00000533242 DHRS4-AS1Q9P1J3 65 aa5.02□□□□□ -1.61
NEDD8-207ENST00000533242 C20orf197Q8N268 126 aa5.02□□□□□ -1.61
NEDD8-207ENST00000533242 IGKV4-1P06312 121 aa5.01□□□□□ -1.61
NEDD8-207ENST00000533242 PRLHP81277 87 aa5.01□□□□□ -1.61
NEDD8-207ENST00000533242 UBE2BP63146 152 aa5.01□□□□□ -1.61
NEDD8-207ENST00000533242 SMIM29Q86T20 159 aa5.01□□□□□ -1.61
NEDD8-207ENST00000533242 NREPQ16612 68 aa5□□□□□ -1.61
NEDD8-207ENST00000533242 C1orf137Q5JT78 98 aa5□□□□□ -1.61
NEDD8-207ENST00000533242 TRAV7A0A075B6U4 112 aa4.98□□□□□ -1.61
NEDD8-207ENST00000533242 SNURFQ9Y675 71 aa4.98□□□□□ -1.61
NEDD8-207ENST00000533242 LORP23490 312 aaPredicted RBP4.98□□□□□ -1.61
NEDD8-207ENST00000533242 PHF5AQ7RTV0 110 aaKnown RBP4.98□□□□□ -1.61
NEDD8-207ENST00000533242 PKIGQ9Y2B9 76 aa4.98□□□□□ -1.61
NEDD8-207ENST00000533242 Q8NBF4 154 aa4.97□□□□□ -1.61
NEDD8-207ENST00000533242 TMEM258P61165 79 aa4.97□□□□□ -1.61
NEDD8-207ENST00000533242 LINC00474Q9P2X8 69 aa4.97□□□□□ -1.61
NEDD8-207ENST00000533242 H7BZZ5 65 aa4.96□□□□□ -1.61
NEDD8-207ENST00000533242 HIGD2AQ9BW72 106 aa4.96□□□□□ -1.61
NEDD8-207ENST00000533242 SPRR4Q96PI1 79 aa4.96□□□□□ -1.62
NEDD8-207ENST00000533242 KRTAP9-2Q9BYQ4 174 aa4.96□□□□□ -1.62
NEDD8-207ENST00000533242 BCE1O60756 84 aa4.95□□□□□ -1.62
NEDD8-207ENST00000533242 IGFL1Q6UW32 110 aa4.95□□□□□ -1.62
NEDD8-207ENST00000533242 DSCR10P59022 87 aa4.94□□□□□ -1.62
NEDD8-207ENST00000533242 KLKP1Q107X0 134 aa4.94□□□□□ -1.62
NEDD8-207ENST00000533242 J3KT08 172 aa4.94□□□□□ -1.62
NEDD8-207ENST00000533242 DEFB116Q30KQ4 102 aa4.94□□□□□ -1.62
NEDD8-207ENST00000533242 OCR1Q9BZK8 76 aa4.94□□□□□ -1.62
NEDD8-207ENST00000533242 K7EQZ3 153 aa4.92□□□□□ -1.62
NEDD8-207ENST00000533242 A0A0U1RQV1 116 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms