RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.49□□□□□ -1.052e-10■■■■■ 55.6
NEDD8-207ENST00000533242 EIF3GO75821 320 aaKnown RBP eCLIP6.69□□□□□ -1.341e-7■■■■□ 19.4
NEDD8-207ENST00000533242 EFTUD2Q15029 972 aaKnown RBP eCLIP8.36□□□□□ -1.071e-8■■■□□ 18.3
NEDD8-207ENST00000533242 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.66□□□□□ -0.383e-7■■■□□ 16.4
NEDD8-207ENST00000533242 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.2□□□□□ -0.782e-13■■□□□ 14.4
NEDD8-207ENST00000533242 FTOQ9C0B1 505 aaKnown RBP eCLIP9.49□□□□□ -0.891e-6■■□□□ 13.4
NEDD8-207ENST00000533242 KHSRPQ92945 711 aaKnown RBP eCLIP9.47□□□□□ -0.894e-7■■□□□ 13.3
NEDD8-207ENST00000533242 DDX3XO00571 662 aaKnown RBP eCLIP8.69□□□□□ -1.022e-10■■□□□ 12.1
NEDD8-207ENST00000533242 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.04□□□□□ -1.281e-15■□□□□ 10.2
NEDD8-207ENST00000533242 ZNF622Q969S3 477 aaKnown RBP eCLIP10.9□□□□□ -0.671e-16■□□□□ 9.9
NEDD8-207ENST00000533242 PTBP1P26599 531 aaKnown RBP eCLIP7.24□□□□□ -1.257e-6■□□□□ 9.8
NEDD8-207ENST00000533242 HNRNPKP61978 463 aaKnown RBP eCLIP8.23□□□□□ -1.095e-7■□□□□ 9.7
NEDD8-207ENST00000533242 HNRNPCP07910 306 aaKnown RBP eCLIP7.55□□□□□ -1.23e-9■□□□□ 8.5
NEDD8-207ENST00000533242 PCBP2Q15366 365 aaKnown RBP eCLIP7.81□□□□□ -1.169e-10■□□□□ 8.1
Retrieved 14 of 14 RNA–protein pairs in 3.5 ms