RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 UTP20O75691 2785 aaKnown RBP9.75□□□□□ -0.85
PCDHA3-202ENST00000532566 C8orf17Q9NRJ1 99 aa9.75□□□□□ -0.85
PCDHA3-202ENST00000532566 LOC101927531A0A1B0GV80 90 aa9.75□□□□□ -0.85
PCDHA3-202ENST00000532566 PSORS1C2Q9UIG4 136 aa9.75□□□□□ -0.85
PCDHA3-202ENST00000532566 CFAP47Q6ZTR5 3102 aa9.74□□□□□ -0.85
PCDHA3-202ENST00000532566 ITPR2Q14571 2701 aa9.73□□□□□ -0.85
PCDHA3-202ENST00000532566 SPRR4Q96PI1 79 aa9.73□□□□□ -0.85
PCDHA3-202ENST00000532566 PLA2G1BP04054 148 aaKnown RBP9.73□□□□□ -0.85
PCDHA3-202ENST00000532566 FAM229AH3BQW9 127 aa9.72□□□□□ -0.85
PCDHA3-202ENST00000532566 C7orf65Q6ZTY9 151 aa9.72□□□□□ -0.85
PCDHA3-202ENST00000532566 A0A1B0GVX0 72 aa9.72□□□□□ -0.85
PCDHA3-202ENST00000532566 SPAG11AQ6PDA7 123 aa9.72□□□□□ -0.85
PCDHA3-202ENST00000532566 ANAPC11Q9NYG5 84 aa9.71□□□□□ -0.86
PCDHA3-202ENST00000532566 LOC400499M0QZD8 3231 aa9.71□□□□□ -0.86
PCDHA3-202ENST00000532566 IGLV7-43P04211 117 aa9.69□□□□□ -0.86
PCDHA3-202ENST00000532566 A0A1B0GU69 56 aa9.67□□□□□ -0.86
PCDHA3-202ENST00000532566 ZANQ9Y493 2812 aa9.67□□□□□ -0.86
PCDHA3-202ENST00000532566 SPRR1AP35321 89 aa9.65□□□□□ -0.86
PCDHA3-202ENST00000532566 Q96NJ1 140 aa9.65□□□□□ -0.86
PCDHA3-202ENST00000532566 NSD1Q96L73 2696 aaPredicted RBP9.65□□□□□ -0.87
PCDHA3-202ENST00000532566 KRTAP26-1Q6PEX3 210 aa9.64□□□□□ -0.87
PCDHA3-202ENST00000532566 COA5Q86WW8 74 aa9.63□□□□□ -0.87
PCDHA3-202ENST00000532566 DSCR10P59022 87 aa9.63□□□□□ -0.87
PCDHA3-202ENST00000532566 OCR1Q9BZK8 76 aa9.63□□□□□ -0.87
PCDHA3-202ENST00000532566 APCP25054 2843 aa9.61□□□□□ -0.87
PCDHA3-202ENST00000532566 USP34Q70CQ2 3546 aa9.61□□□□□ -0.87
PCDHA3-202ENST00000532566 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.6□□□□□ -0.87
PCDHA3-202ENST00000532566 A8MUN3 132 aa9.59□□□□□ -0.87
PCDHA3-202ENST00000532566 HRNRQ86YZ3 2850 aaPredicted RBP9.58□□□□□ -0.88
PCDHA3-202ENST00000532566 ASH1LQ9NR48 2969 aaKnown RBP9.57□□□□□ -0.88
PCDHA3-202ENST00000532566 LINC00304Q8N9R0 145 aa9.56□□□□□ -0.88
PCDHA3-202ENST00000532566 TNP2Q05952 138 aa9.56□□□□□ -0.88
PCDHA3-202ENST00000532566 KRTAP1-5Q9BYS1 174 aa9.55□□□□□ -0.88
PCDHA3-202ENST00000532566 HIVEP1P15822 2718 aa9.54□□□□□ -0.88
PCDHA3-202ENST00000532566 MYO15AQ9UKN7 3530 aa9.54□□□□□ -0.88
PCDHA3-202ENST00000532566 SPANXA2-OT1Q8N9U9 137 aa9.52□□□□□ -0.89
PCDHA3-202ENST00000532566 CYP4F30PQ9H0H9 118 aa9.52□□□□□ -0.89
PCDHA3-202ENST00000532566 NIPBLQ6KC79 2804 aaeCLIP9.52□□□□□ -0.89
PCDHA3-202ENST00000532566 SMR3BP02814 79 aaPredicted RBP9.51□□□□□ -0.89
PCDHA3-202ENST00000532566 CELSR2Q9HCU4 2923 aa9.48□□□□□ -0.89
PCDHA3-202ENST00000532566 LINC00336Q6ZUF6 198 aa9.48□□□□□ -0.89
PCDHA3-202ENST00000532566 SPRR1BP22528 89 aa9.47□□□□□ -0.89
PCDHA3-202ENST00000532566 STAB2Q8WWQ8 2551 aa9.47□□□□□ -0.89
PCDHA3-202ENST00000532566 ATP11AUNQ6ZP68 121 aa9.46□□□□□ -0.89
PCDHA3-202ENST00000532566 CD164Q04900 197 aa9.46□□□□□ -0.9
PCDHA3-202ENST00000532566 IGLV8-61A0A075B6I0 122 aa9.46□□□□□ -0.9
PCDHA3-202ENST00000532566 PLAC8Q9NZF1 115 aa9.46□□□□□ -0.9
PCDHA3-202ENST00000532566 CYSTM1Q9H1C7 97 aa9.43□□□□□ -0.9
PCDHA3-202ENST00000532566 NF1P21359 2839 aa9.42□□□□□ -0.9
PCDHA3-202ENST00000532566 KMT2BQ9UMN6 2715 aaPredicted RBP9.42□□□□□ -0.9
PCDHA3-202ENST00000532566 C9orf92A6NGG3 77 aa9.4□□□□□ -0.9
PCDHA3-202ENST00000532566 DMBT1Q9UGM3 2413 aaPredicted RBP9.4□□□□□ -0.91
PCDHA3-202ENST00000532566 MMP24-AS1A0A0U1RRL7 71 aa9.39□□□□□ -0.91
PCDHA3-202ENST00000532566 KRTAP4-16G5E9R7 235 aaPredicted RBP9.38□□□□□ -0.91
PCDHA3-202ENST00000532566 UQCR11O14957 56 aa9.38□□□□□ -0.91
PCDHA3-202ENST00000532566 LINC00472Q9H8W2 130 aa9.38□□□□□ -0.91
PCDHA3-202ENST00000532566 FBN2P35556 2912 aa9.37□□□□□ -0.91
PCDHA3-202ENST00000532566 CRYBG3Q68DQ2 2970 aa9.36□□□□□ -0.91
PCDHA3-202ENST00000532566 DCHS2Q6V1P9 2916 aa9.36□□□□□ -0.91
PCDHA3-202ENST00000532566 FAM229BQ4G0N7 80 aa9.35□□□□□ -0.91
PCDHA3-202ENST00000532566 IGLV7-46A0A075B6I9 117 aa9.32□□□□□ -0.92
PCDHA3-202ENST00000532566 Q1T7F1 81 aa9.29□□□□□ -0.92
PCDHA3-202ENST00000532566 PRR26Q8N8Z3 221 aa9.29□□□□□ -0.92
PCDHA3-202ENST00000532566 MIR22HGQ0VDD5 57 aa9.26□□□□□ -0.93
PCDHA3-202ENST00000532566 PANO1I0J062 215 aa9.25□□□□□ -0.93
PCDHA3-202ENST00000532566 Q8N1X5 172 aa9.25□□□□□ -0.93
PCDHA3-202ENST00000532566 MXRA5Q9NR99 2828 aa9.24□□□□□ -0.93
PCDHA3-202ENST00000532566 TENM4Q6N022 2769 aa9.23□□□□□ -0.93
PCDHA3-202ENST00000532566 HRES1P13985 223 aa9.22□□□□□ -0.93
PCDHA3-202ENST00000532566 Q5XG85 94 aa9.22□□□□□ -0.93
PCDHA3-202ENST00000532566 FP248Q71RG6 208 aaPredicted RBP9.21□□□□□ -0.93
PCDHA3-202ENST00000532566 LINC00483Q53H64 154 aa9.19□□□□□ -0.94
PCDHA3-202ENST00000532566 FLG2Q5D862 2391 aaPredicted RBP9.19□□□□□ -0.94
PCDHA3-202ENST00000532566 Q6ZR54 194 aa9.19□□□□□ -0.94
PCDHA3-202ENST00000532566 Q8N9P0 234 aaPredicted RBP9.18□□□□□ -0.94
PCDHA3-202ENST00000532566 WDFY3Q8IZQ1 3526 aa9.18□□□□□ -0.94
PCDHA3-202ENST00000532566 J3QL48 77 aa9.18□□□□□ -0.94
PCDHA3-202ENST00000532566 RELNP78509 3460 aa9.18□□□□□ -0.94
PCDHA3-202ENST00000532566 CDC42SE1Q9NRR8 79 aa9.17□□□□□ -0.94
PCDHA3-202ENST00000532566 KRTAP10-2P60368 255 aa9.16□□□□□ -0.94
PCDHA3-202ENST00000532566 KRTAP7-1Q8IUC3 87 aa9.16□□□□□ -0.94
PCDHA3-202ENST00000532566 KRTAP10-1P60331 282 aa9.15□□□□□ -0.95
PCDHA3-202ENST00000532566 OXTP01178 125 aa9.14□□□□□ -0.95
PCDHA3-202ENST00000532566 KRTAP29-1A8MX34 341 aaPredicted RBP9.12□□□□□ -0.95
PCDHA3-202ENST00000532566 MUC3AQ02505 3323 aa9.12□□□□□ -0.95
PCDHA3-202ENST00000532566 Q5W150 140 aa9.12□□□□□ -0.95
PCDHA3-202ENST00000532566 Q6ZRN7 208 aaPredicted RBP9.12□□□□□ -0.95
PCDHA3-202ENST00000532566 KRTAP11-1Q8IUC1 163 aa9.11□□□□□ -0.95
PCDHA3-202ENST00000532566 ZCCHC13Q8WW36 166 aaKnown RBP9.1□□□□□ -0.95
PCDHA3-202ENST00000532566 Q75L30 129 aa9.09□□□□□ -0.95
PCDHA3-202ENST00000532566 LINC01558Q9Y6Z2 57 aa9.09□□□□□ -0.95
PCDHA3-202ENST00000532566 KTN1-AS1Q86SY8 53 aa9.08□□□□□ -0.96
PCDHA3-202ENST00000532566 DCHS1Q96JQ0 3298 aa9.06□□□□□ -0.96
PCDHA3-202ENST00000532566 LAMA5O15230 3695 aa9.04□□□□□ -0.96
PCDHA3-202ENST00000532566 RBM12B-AS1Q9P1G2 102 aa9.04□□□□□ -0.96
PCDHA3-202ENST00000532566 ASPMQ8IZT6 3477 aa9.02□□□□□ -0.97
PCDHA3-202ENST00000532566 LCE6AA0A183 80 aa9.01□□□□□ -0.97
PCDHA3-202ENST00000532566 COX6B2Q6YFQ2 88 aa9.01□□□□□ -0.97
PCDHA3-202ENST00000532566 Q5VV11 94 aa9□□□□□ -0.97
PCDHA3-202ENST00000532566 A0A087X002 238 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 172.1 ms