RNA–Protein interactions for RNA: ENST00000531474.2

NXF1-209, Transcript of nuclear RNA export factor 1, human

TSL 3

Gene NXF1, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXF1-209	ENST00000531474	RYR1	P21817	5038 aa		5.92	□□□□□ -1.46
NXF1-209	ENST00000531474	SMR3B	P02814	79 aa	Predicted RBP	5.91	□□□□□ -1.46
NXF1-209	ENST00000531474	UBE2B	P63146	152 aa		5.91	□□□□□ -1.46
NXF1-209	ENST00000531474		Q6JHZ5	121 aa		5.91	□□□□□ -1.46
NXF1-209	ENST00000531474	LINC00846	Q9NV44	126 aa		5.91	□□□□□ -1.46
NXF1-209	ENST00000531474	PLAC8	Q9NZF1	115 aa		5.91	□□□□□ -1.46
NXF1-209	ENST00000531474	KIAA1109	Q2LD37	5005 aa		5.91	□□□□□ -1.46
NXF1-209	ENST00000531474	IGLV5-48	A0A075B6I7	105 aa		5.9	□□□□□ -1.46
NXF1-209	ENST00000531474	LOC100996750	A0A140TA64	210 aa		5.9	□□□□□ -1.46
NXF1-209	ENST00000531474		A0A1B0GV72	72 aa		5.9	□□□□□ -1.46
NXF1-209	ENST00000531474		Q8N377	158 aa		5.9	□□□□□ -1.46
NXF1-209	ENST00000531474	KRTAP4-6	Q9BYQ5	205 aa		5.9	□□□□□ -1.46
NXF1-209	ENST00000531474	DNAH8	Q96JB1	4490 aa		5.89	□□□□□ -1.47
NXF1-209	ENST00000531474	EPM2A	B3EWF7	344 aa		5.89	□□□□□ -1.47
NXF1-209	ENST00000531474	SMCR5	Q8TEV8	140 aa		5.89	□□□□□ -1.47
NXF1-209	ENST00000531474		Q9BRP9	147 aa		5.89	□□□□□ -1.47
NXF1-209	ENST00000531474	APOB	P04114	4563 aa	Known RBP	5.89	□□□□□ -1.47
NXF1-209	ENST00000531474	FAM19A1	Q7Z5A9	133 aa		5.88	□□□□□ -1.47
NXF1-209	ENST00000531474	DEFB105A	Q8NG35	78 aa		5.88	□□□□□ -1.47
NXF1-209	ENST00000531474	LINC01547	P58512	204 aa	Predicted RBP	5.87	□□□□□ -1.47
NXF1-209	ENST00000531474		F8WEM9	126 aa		5.86	□□□□□ -1.47
NXF1-209	ENST00000531474	PHF5A	Q7RTV0	110 aa	Known RBP	5.86	□□□□□ -1.47
NXF1-209	ENST00000531474		Q8N1X5	172 aa		5.86	□□□□□ -1.47
NXF1-209	ENST00000531474	HERC2	O95714	4834 aa		5.86	□□□□□ -1.47
NXF1-209	ENST00000531474		Q5VSD8	79 aa		5.85	□□□□□ -1.47
NXF1-209	ENST00000531474	ANAPC13	Q9BS18	74 aa		5.85	□□□□□ -1.47
NXF1-209	ENST00000531474	BCE1	O60756	84 aa		5.84	□□□□□ -1.47
NXF1-209	ENST00000531474	UBE2A	P49459	152 aa		5.84	□□□□□ -1.47
NXF1-209	ENST00000531474	RPL37A	P61513	92 aa	Known RBP	5.84	□□□□□ -1.47
NXF1-209	ENST00000531474	CXCL6	P80162	114 aa		5.84	□□□□□ -1.47
NXF1-209	ENST00000531474	KRTAP17-1	Q9BYP8	105 aa		5.84	□□□□□ -1.47
NXF1-209	ENST00000531474	PLA2G1B	P04054	148 aa	Known RBP	5.83	□□□□□ -1.48
NXF1-209	ENST00000531474	C1orf137	Q5JT78	98 aa		5.83	□□□□□ -1.48
NXF1-209	ENST00000531474	ERC2-IT1	O76042	136 aa		5.82	□□□□□ -1.48
NXF1-209	ENST00000531474	SPRR1B	P22528	89 aa		5.82	□□□□□ -1.48
NXF1-209	ENST00000531474	NREP	Q16612	68 aa		5.82	□□□□□ -1.48
NXF1-209	ENST00000531474		Q6ZVQ6	151 aa		5.82	□□□□□ -1.48
NXF1-209	ENST00000531474	HIGD2A	Q9BW72	106 aa		5.82	□□□□□ -1.48
NXF1-209	ENST00000531474	HSPG2	P98160	4391 aa		5.82	□□□□□ -1.48
NXF1-209	ENST00000531474	IGLV8-61	A0A075B6I0	122 aa		5.81	□□□□□ -1.48
NXF1-209	ENST00000531474	IGKV3D-7	A0A0C4DH55	119 aa		5.81	□□□□□ -1.48
NXF1-209	ENST00000531474	ATOX1	O00244	68 aa		5.81	□□□□□ -1.48
NXF1-209	ENST00000531474	ST20-AS1	Q8NBB2	130 aa		5.81	□□□□□ -1.48
NXF1-209	ENST00000531474	FAM236A	A0A1B0GUQ0	79 aa		5.8	□□□□□ -1.48
NXF1-209	ENST00000531474	FAM236B	A0A1B0GV22	79 aa		5.8	□□□□□ -1.48
NXF1-209	ENST00000531474	PRLH	P81277	87 aa		5.8	□□□□□ -1.48
NXF1-209	ENST00000531474	KRTAP11-1	Q8IUC1	163 aa		5.8	□□□□□ -1.48
NXF1-209	ENST00000531474	SPRR4	Q96PI1	79 aa		5.8	□□□□□ -1.48
NXF1-209	ENST00000531474	KRTAP4-5	Q9BYR2	181 aa		5.8	□□□□□ -1.48
NXF1-209	ENST00000531474	PSORS1C2	Q9UIG4	136 aa		5.8	□□□□□ -1.48
NXF1-209	ENST00000531474	HIST1H4A	P62805	103 aa	Known RBP	5.79	□□□□□ -1.48
NXF1-209	ENST00000531474	SMIM29	Q86T20	159 aa		5.79	□□□□□ -1.48
NXF1-209	ENST00000531474		Q8NBF4	154 aa		5.79	□□□□□ -1.48
NXF1-209	ENST00000531474	ZNF706	Q9Y5V0	76 aa	Predicted RBP	5.79	□□□□□ -1.48
NXF1-209	ENST00000531474	CRYGA	P11844	174 aa		5.77	□□□□□ -1.49
NXF1-209	ENST00000531474	KRTAP10-4	P60372	401 aa	Predicted RBP	5.77	□□□□□ -1.49
NXF1-209	ENST00000531474	KRTAP13-1	Q8IUC0	172 aa		5.77	□□□□□ -1.49
NXF1-209	ENST00000531474		A0A1W2PNM2	257 aa		5.76	□□□□□ -1.49
NXF1-209	ENST00000531474	SMIM20	Q8N5G0	67 aa		5.76	□□□□□ -1.49
NXF1-209	ENST00000531474	C3orf22	Q8N5N4	141 aa		5.76	□□□□□ -1.49
NXF1-209	ENST00000531474	BPY2	O14599	106 aa		5.75	□□□□□ -1.49
NXF1-209	ENST00000531474	VPS13B	Q7Z7G8	4022 aa		5.74	□□□□□ -1.49
NXF1-209	ENST00000531474	ZNF861P	O60384	105 aa		5.74	□□□□□ -1.49
NXF1-209	ENST00000531474	IGLV7-43	P04211	117 aa		5.74	□□□□□ -1.49
NXF1-209	ENST00000531474	FAT1	Q14517	4588 aa		5.74	□□□□□ -1.49
NXF1-209	ENST00000531474	ABCA13	Q86UQ4	5058 aa		5.73	□□□□□ -1.49
NXF1-209	ENST00000531474	UQCRQ	O14949	82 aa		5.73	□□□□□ -1.49
NXF1-209	ENST00000531474	IGFL1	Q6UW32	110 aa		5.73	□□□□□ -1.49
NXF1-209	ENST00000531474	LINC00483	Q53H64	154 aa		5.72	□□□□□ -1.49
NXF1-209	ENST00000531474	SRRM2	Q9UQ35	2752 aa	Known RBP	5.72	□□□□□ -1.49
NXF1-209	ENST00000531474	COX7C	P15954	63 aa		5.71	□□□□□ -1.5
NXF1-209	ENST00000531474	SERP2	Q8N6R1	65 aa		5.71	□□□□□ -1.5
NXF1-209	ENST00000531474		A0A087WVE0	104 aa		5.7	□□□□□ -1.5
NXF1-209	ENST00000531474	SPINK6	Q6UWN8	80 aa		5.7	□□□□□ -1.5
NXF1-209	ENST00000531474	LCE2B	O14633	110 aa		5.69	□□□□□ -1.5
NXF1-209	ENST00000531474	TRAV7	A0A075B6U4	112 aa		5.67	□□□□□ -1.5
NXF1-209	ENST00000531474		A0A087WSZ3	146 aa		5.66	□□□□□ -1.5
NXF1-209	ENST00000531474	CCDC179	H3BU77	68 aa		5.66	□□□□□ -1.5
NXF1-209	ENST00000531474		J3KT08	172 aa		5.66	□□□□□ -1.5
NXF1-209	ENST00000531474	IGKV4-1	P06312	121 aa		5.66	□□□□□ -1.5
NXF1-209	ENST00000531474	PCLO	Q9Y6V0	5065 aa		5.66	□□□□□ -1.5
NXF1-209	ENST00000531474	C9orf153	Q5TBE3	101 aa		5.65	□□□□□ -1.5
NXF1-209	ENST00000531474	SS18L2	Q9UHA2	77 aa		5.65	□□□□□ -1.5
NXF1-209	ENST00000531474	SSBP3-AS1	Q7Z2R9	100 aa		5.64	□□□□□ -1.51
NXF1-209	ENST00000531474	PKHD1L1	Q86WI1	4243 aa		5.63	□□□□□ -1.51
NXF1-209	ENST00000531474	IGLV9-49	A0A0B4J1Y8	123 aa		5.63	□□□□□ -1.51
NXF1-209	ENST00000531474	NDUFB1	O75438	58 aa		5.61	□□□□□ -1.51
NXF1-209	ENST00000531474	OXT	P01178	125 aa		5.61	□□□□□ -1.51
NXF1-209	ENST00000531474	DSCR10	P59022	87 aa		5.61	□□□□□ -1.51
NXF1-209	ENST00000531474	CD164	Q04900	197 aa		5.61	□□□□□ -1.51
NXF1-209	ENST00000531474	KRTAP29-1	A8MX34	341 aa	Predicted RBP	5.6	□□□□□ -1.51
NXF1-209	ENST00000531474	KRTAP1-4	P0C5Y4	121 aa		5.6	□□□□□ -1.51
NXF1-209	ENST00000531474	LINC00472	Q9H8W2	130 aa		5.6	□□□□□ -1.51
NXF1-209	ENST00000531474		A0A0G2JQZ4	141 aa		5.59	□□□□□ -1.51
NXF1-209	ENST00000531474	MOBP	Q13875	183 aa		5.59	□□□□□ -1.51
NXF1-209	ENST00000531474	FAM229B	Q4G0N7	80 aa		5.59	□□□□□ -1.51
NXF1-209	ENST00000531474	LCE2C	Q5TA81	110 aa		5.59	□□□□□ -1.51
NXF1-209	ENST00000531474		Q8N9L7	120 aa		5.59	□□□□□ -1.51
NXF1-209	ENST00000531474	ANAPC11	Q9NYG5	84 aa		5.59	□□□□□ -1.51
NXF1-209	ENST00000531474	FLG2	Q5D862	2391 aa	Predicted RBP	5.59	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms