RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 Q8N377 158 aa3.98□□□□□ -1.77
ITGB1-218ENST00000528877 COPS9Q8WXC6 57 aa3.98□□□□□ -1.77
ITGB1-218ENST00000528877 TTTY13Q9BZ97 58 aa3.98□□□□□ -1.77
ITGB1-218ENST00000528877 IGLV9-49A0A0B4J1Y8 123 aa3.97□□□□□ -1.77
ITGB1-218ENST00000528877 IFITM1P13164 125 aa3.97□□□□□ -1.77
ITGB1-218ENST00000528877 HINT1P49773 126 aaPredicted RBP3.97□□□□□ -1.77
ITGB1-218ENST00000528877 SNRPEP62304 92 aaKnown RBP3.97□□□□□ -1.77
ITGB1-218ENST00000528877 KRTAP4-4Q9BYR3 166 aa3.97□□□□□ -1.77
ITGB1-218ENST00000528877 SLC25A20O43772 301 aa3.96□□□□□ -1.78
ITGB1-218ENST00000528877 SLC25A34Q6PIV7 304 aa3.96□□□□□ -1.78
ITGB1-218ENST00000528877 SCGB1D4Q6XE38 83 aa3.96□□□□□ -1.78
ITGB1-218ENST00000528877 ST20-AS1Q8NBB2 130 aa3.96□□□□□ -1.78
ITGB1-218ENST00000528877 C6orf99Q4VX62 202 aa3.95□□□□□ -1.78
ITGB1-218ENST00000528877 OR13C6PQ8NH95 151 aa3.95□□□□□ -1.78
ITGB1-218ENST00000528877 A0A1B0GWB2 263 aa3.94□□□□□ -1.78
ITGB1-218ENST00000528877 COX7BP24311 80 aa3.94□□□□□ -1.78
ITGB1-218ENST00000528877 ASB16-AS1Q495Z4 193 aa3.94□□□□□ -1.78
ITGB1-218ENST00000528877 C9orf153Q5TBE3 101 aa3.94□□□□□ -1.78
ITGB1-218ENST00000528877 PCP2Q8IVA1 136 aa3.94□□□□□ -1.78
ITGB1-218ENST00000528877 ATOH7Q8N100 152 aa3.94□□□□□ -1.78
ITGB1-218ENST00000528877 HIST3H2BBQ8N257 126 aa3.94□□□□□ -1.78
ITGB1-218ENST00000528877 HIST1H2BLQ99880 126 aa3.94□□□□□ -1.78
ITGB1-218ENST00000528877 IGLV5-48A0A075B6I7 105 aa3.93□□□□□ -1.78
ITGB1-218ENST00000528877 LIMD2Q9BT23 127 aa3.93□□□□□ -1.78
ITGB1-218ENST00000528877 TRAV13-2A0A0B4J235 113 aa3.92□□□□□ -1.78
ITGB1-218ENST00000528877 A4D1N5 150 aa3.92□□□□□ -1.78
ITGB1-218ENST00000528877 S100A1P23297 94 aa3.92□□□□□ -1.78
ITGB1-218ENST00000528877 CD164Q04900 197 aa3.92□□□□□ -1.78
ITGB1-218ENST00000528877 LAMTOR3Q9UHA4 124 aa3.92□□□□□ -1.78
ITGB1-218ENST00000528877 TEX49A0A1B0GTD5 131 aa3.91□□□□□ -1.78
ITGB1-218ENST00000528877 LINC01547P58512 204 aaPredicted RBP3.91□□□□□ -1.78
ITGB1-218ENST00000528877 Q5XG85 94 aa3.91□□□□□ -1.78
ITGB1-218ENST00000528877 MUSTN1Q8IVN3 82 aa3.91□□□□□ -1.78
ITGB1-218ENST00000528877 CRCT1Q9UGL9 99 aa3.91□□□□□ -1.78
ITGB1-218ENST00000528877 A6NDN8 102 aa3.9□□□□□ -1.79
ITGB1-218ENST00000528877 S100A2P29034 98 aa3.9□□□□□ -1.79
ITGB1-218ENST00000528877 NHP2Q9NX24 153 aaKnown RBP3.9□□□□□ -1.79
ITGB1-218ENST00000528877 HSBP1L1C9JCN9 74 aa3.89□□□□□ -1.79
ITGB1-218ENST00000528877 SEC61BP60468 96 aaKnown RBP3.89□□□□□ -1.79
ITGB1-218ENST00000528877 SMIM29Q86T20 159 aa3.89□□□□□ -1.79
ITGB1-218ENST00000528877 SMIM11BQ8TCY0 68 aa3.89□□□□□ -1.79
ITGB1-218ENST00000528877 PRO1933Q9H354 126 aa3.89□□□□□ -1.79
ITGB1-218ENST00000528877 TAL2Q16559 108 aa3.88□□□□□ -1.79
ITGB1-218ENST00000528877 DLEU1O43261 78 aa3.87□□□□□ -1.79
ITGB1-218ENST00000528877 S100A6P06703 90 aa3.87□□□□□ -1.79
ITGB1-218ENST00000528877 Q1RN00 199 aa3.87□□□□□ -1.79
ITGB1-218ENST00000528877 H7C2G1 150 aa3.86□□□□□ -1.79
ITGB1-218ENST00000528877 LINC00575Q6W349 94 aa3.86□□□□□ -1.79
ITGB1-218ENST00000528877 DEFB105AQ8NG35 78 aa3.86□□□□□ -1.79
ITGB1-218ENST00000528877 KRTAP4-1Q9BYQ7 146 aa3.86□□□□□ -1.79
ITGB1-218ENST00000528877 FSIP2Q5CZC0 6907 aa3.86□□□□□ -1.79
ITGB1-218ENST00000528877 IGLV8-61A0A075B6I0 122 aa3.85□□□□□ -1.79
ITGB1-218ENST00000528877 COX8AP10176 69 aa3.85□□□□□ -1.79
ITGB1-218ENST00000528877 VAMP3Q15836 100 aa3.85□□□□□ -1.79
ITGB1-218ENST00000528877 PPDPFLQ8WWR9 84 aa3.85□□□□□ -1.79
ITGB1-218ENST00000528877 BVES-AS1Q5T3Y7 98 aa3.84□□□□□ -1.79
ITGB1-218ENST00000528877 C1orf195Q5TG92 126 aa3.84□□□□□ -1.79
ITGB1-218ENST00000528877 HRCT1Q6UXD1 115 aa3.84□□□□□ -1.79
ITGB1-218ENST00000528877 hADV29S1A0JD25 119 aa3.83□□□□□ -1.8
ITGB1-218ENST00000528877 SCGB1D1O95968 90 aa3.83□□□□□ -1.8
ITGB1-218ENST00000528877 Q6JHZ5 121 aa3.83□□□□□ -1.8
ITGB1-218ENST00000528877 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.83□□□□□ -1.8
ITGB1-218ENST00000528877 Q6ZQY7 126 aa3.83□□□□□ -1.8
ITGB1-218ENST00000528877 CLEC2BQ92478 149 aa3.83□□□□□ -1.8
ITGB1-218ENST00000528877 HIST1H4GQ99525 98 aa3.83□□□□□ -1.8
ITGB1-218ENST00000528877 HIGD1BQ9P298 99 aa3.83□□□□□ -1.8
ITGB1-218ENST00000528877 F8WEM9 126 aa3.82□□□□□ -1.8
ITGB1-218ENST00000528877 A0A0B4J2C4 111 aa3.81□□□□□ -1.8
ITGB1-218ENST00000528877 TCL1BO95988 128 aa3.81□□□□□ -1.8
ITGB1-218ENST00000528877 KRTAP19-2Q3LHN2 52 aa3.81□□□□□ -1.8
ITGB1-218ENST00000528877 C2orf91Q6ZV80 131 aa3.81□□□□□ -1.8
ITGB1-218ENST00000528877 C12orf57Q99622 126 aa3.81□□□□□ -1.8
ITGB1-218ENST00000528877 A0A0G2JQZ4 141 aa3.8□□□□□ -1.8
ITGB1-218ENST00000528877 TRBV7-7A0A0K0K1E9 115 aa3.8□□□□□ -1.8
ITGB1-218ENST00000528877 CFC1BP0CG36 223 aa3.8□□□□□ -1.8
ITGB1-218ENST00000528877 CFC1P0CG37 223 aa3.8□□□□□ -1.8
ITGB1-218ENST00000528877 OCIAD2Q56VL3 154 aa3.8□□□□□ -1.8
ITGB1-218ENST00000528877 IGFL1Q6UW32 110 aa3.8□□□□□ -1.8
ITGB1-218ENST00000528877 C9orf92A6NGG3 77 aa3.79□□□□□ -1.8
ITGB1-218ENST00000528877 SPATA45Q537H7 98 aa3.79□□□□□ -1.8
ITGB1-218ENST00000528877 VAMP8Q9BV40 100 aa3.79□□□□□ -1.8
ITGB1-218ENST00000528877 RPL37P61927 97 aaKnown RBP3.78□□□□□ -1.8
ITGB1-218ENST00000528877 PCOTHQ58A44 107 aa3.78□□□□□ -1.8
ITGB1-218ENST00000528877 Q6Q795 121 aa3.78□□□□□ -1.8
ITGB1-218ENST00000528877 C14orf144Q96I85 54 aa3.78□□□□□ -1.8
ITGB1-218ENST00000528877 A0A1B0GX51 115 aa3.77□□□□□ -1.81
ITGB1-218ENST00000528877 H0YGX0 51 aa3.77□□□□□ -1.81
ITGB1-218ENST00000528877 CEND1Q8N111 149 aa3.77□□□□□ -1.81
ITGB1-218ENST00000528877 RAB37Q96AX2 223 aa3.77□□□□□ -1.81
ITGB1-218ENST00000528877 FAM218AQ96MZ4 157 aa3.77□□□□□ -1.81
ITGB1-218ENST00000528877 SNCGO76070 127 aa3.75□□□□□ -1.81
ITGB1-218ENST00000528877 SNHG12Q9BXW3 62 aa3.75□□□□□ -1.81
ITGB1-218ENST00000528877 SS18L2Q9UHA2 77 aa3.75□□□□□ -1.81
ITGB1-218ENST00000528877 PRO1854Q9UHT4 67 aa3.75□□□□□ -1.81
ITGB1-218ENST00000528877 H3BUT2 72 aa3.74□□□□□ -1.81
ITGB1-218ENST00000528877 FXYD2P54710 66 aa3.74□□□□□ -1.81
ITGB1-218ENST00000528877 MT1HP80294 61 aa3.74□□□□□ -1.81
ITGB1-218ENST00000528877 Q75L30 129 aa3.74□□□□□ -1.81
ITGB1-218ENST00000528877 FLGP20930 4061 aaPredicted RBP3.74□□□□□ -1.81
ITGB1-218ENST00000528877 NDUFV3P56181 108 aaKnown RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms