RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 KRTAP13-1Q8IUC0 172 aa9.15□□□□□ -0.94
ECHDC1-220ENST00000528402 CRYGAP11844 174 aa9.14□□□□□ -0.95
ECHDC1-220ENST00000528402 A0A087WVE0 104 aa9.13□□□□□ -0.95
ECHDC1-220ENST00000528402 UQCRQO14949 82 aa9.13□□□□□ -0.95
ECHDC1-220ENST00000528402 BPY2O14599 106 aa9.12□□□□□ -0.95
ECHDC1-220ENST00000528402 SMIM20Q8N5G0 67 aa9.12□□□□□ -0.95
ECHDC1-220ENST00000528402 ZNF706Q9Y5V0 76 aaPredicted RBP9.12□□□□□ -0.95
ECHDC1-220ENST00000528402 COX7CP15954 63 aa9.11□□□□□ -0.95
ECHDC1-220ENST00000528402 IGFL1Q6UW32 110 aa9.1□□□□□ -0.95
ECHDC1-220ENST00000528402 SERP2Q8N6R1 65 aa9.1□□□□□ -0.95
ECHDC1-220ENST00000528402 DNAH6Q9C0G6 4158 aa9.1□□□□□ -0.95
ECHDC1-220ENST00000528402 CCDC179H3BU77 68 aa9.08□□□□□ -0.96
ECHDC1-220ENST00000528402 RPL37AP61513 92 aaKnown RBP9.08□□□□□ -0.96
ECHDC1-220ENST00000528402 PSORS1C2Q9UIG4 136 aa9.05□□□□□ -0.96
ECHDC1-220ENST00000528402 ZNF861PO60384 105 aa9.05□□□□□ -0.96
ECHDC1-220ENST00000528402 LINC00483Q53H64 154 aa9.05□□□□□ -0.96
ECHDC1-220ENST00000528402 FBN3Q75N90 2809 aa9.05□□□□□ -0.96
ECHDC1-220ENST00000528402 IGKV4-1P06312 121 aa9.02□□□□□ -0.97
ECHDC1-220ENST00000528402 C9orf153Q5TBE3 101 aa9.02□□□□□ -0.97
ECHDC1-220ENST00000528402 SCXQ7RTU7 201 aa9.02□□□□□ -0.97
ECHDC1-220ENST00000528402 DNAH17Q9UFH2 4485 aa9.02□□□□□ -0.97
ECHDC1-220ENST00000528402 TRAV7A0A075B6U4 112 aa9.01□□□□□ -0.97
ECHDC1-220ENST00000528402 ALMS1Q8TCU4 4167 aa9□□□□□ -0.97
ECHDC1-220ENST00000528402 DNAH2Q9P225 4427 aa8.99□□□□□ -0.97
ECHDC1-220ENST00000528402 KMT2AQ03164 3969 aa8.99□□□□□ -0.97
ECHDC1-220ENST00000528402 HECTD4Q9Y4D8 3996 aa8.99□□□□□ -0.97
ECHDC1-220ENST00000528402 A0A087WSZ3 146 aa8.97□□□□□ -0.97
ECHDC1-220ENST00000528402 IGLV7-43P04211 117 aa8.97□□□□□ -0.97
ECHDC1-220ENST00000528402 KRTAP10-2P60368 255 aa8.97□□□□□ -0.97
ECHDC1-220ENST00000528402 Q6ZSA8 131 aa8.97□□□□□ -0.97
ECHDC1-220ENST00000528402 TGP01266 2768 aa8.95□□□□□ -0.98
ECHDC1-220ENST00000528402 DSCR10P59022 87 aa8.94□□□□□ -0.98
ECHDC1-220ENST00000528402 CIRBP-AS1Q8TBR5 109 aa8.94□□□□□ -0.98
ECHDC1-220ENST00000528402 J3KT08 172 aa8.93□□□□□ -0.98
ECHDC1-220ENST00000528402 A0A0G2JQZ4 141 aa8.92□□□□□ -0.98
ECHDC1-220ENST00000528402 LINC00336Q6ZUF6 198 aa8.92□□□□□ -0.98
ECHDC1-220ENST00000528402 Q8N9L7 120 aa8.92□□□□□ -0.98
ECHDC1-220ENST00000528402 IGLV9-49A0A0B4J1Y8 123 aa8.91□□□□□ -0.98
ECHDC1-220ENST00000528402 FAM30AQ9NZY2 134 aa8.91□□□□□ -0.98
ECHDC1-220ENST00000528402 SS18L2Q9UHA2 77 aa8.91□□□□□ -0.98
ECHDC1-220ENST00000528402 KRTAP10-1P60331 282 aa8.89□□□□□ -0.99
ECHDC1-220ENST00000528402 LINC00472Q9H8W2 130 aa8.89□□□□□ -0.99
ECHDC1-220ENST00000528402 LCE6AA0A183 80 aa8.87□□□□□ -0.99
ECHDC1-220ENST00000528402 K7EQZ3 153 aa8.87□□□□□ -0.99
ECHDC1-220ENST00000528402 SSBP3-AS1Q7Z2R9 100 aa8.87□□□□□ -0.99
ECHDC1-220ENST00000528402 HCG22E2RYF7 251 aa8.86□□□□□ -0.99
ECHDC1-220ENST00000528402 A8MWP4 228 aa8.85□□□□□ -0.99
ECHDC1-220ENST00000528402 MOBPQ13875 183 aa8.85□□□□□ -0.99
ECHDC1-220ENST00000528402 OCR1Q9BZK8 76 aa8.85□□□□□ -0.99
ECHDC1-220ENST00000528402 CD164Q04900 197 aa8.84□□□□□ -0.99
ECHDC1-220ENST00000528402 KLKP1Q107X0 134 aa8.84□□□□□ -0.99
ECHDC1-220ENST00000528402 NDUFB1O75438 58 aa8.83□□□□□ -1
ECHDC1-220ENST00000528402 TMEM258P61165 79 aa8.83□□□□□ -1
ECHDC1-220ENST00000528402 PRR15Q8IV56 129 aa8.83□□□□□ -1
ECHDC1-220ENST00000528402 C20orf197Q8N268 126 aa8.83□□□□□ -1
ECHDC1-220ENST00000528402 NDUFC1O43677 76 aa8.82□□□□□ -1
ECHDC1-220ENST00000528402 DNAH8Q96JB1 4490 aa8.82□□□□□ -1
ECHDC1-220ENST00000528402 FRAS1Q86XX4 4008 aa8.82□□□□□ -1
ECHDC1-220ENST00000528402 FAM229BQ4G0N7 80 aa8.81□□□□□ -1
ECHDC1-220ENST00000528402 DEFB116Q30KQ4 102 aa8.8□□□□□ -1
ECHDC1-220ENST00000528402 DNAH11Q96DT5 4516 aa8.78□□□□□ -1
ECHDC1-220ENST00000528402 ANAPC11Q9NYG5 84 aa8.78□□□□□ -1
ECHDC1-220ENST00000528402 DNAH5Q8TE73 4624 aa8.77□□□□□ -1.01
ECHDC1-220ENST00000528402 TMEM254Q8TBM7 123 aa8.77□□□□□ -1.01
ECHDC1-220ENST00000528402 SRRM2Q9UQ35 2752 aaKnown RBP8.76□□□□□ -1.01
ECHDC1-220ENST00000528402 C5orf47Q569G3 176 aa8.76□□□□□ -1.01
ECHDC1-220ENST00000528402 HYDINQ4G0P3 5121 aa8.75□□□□□ -1.01
ECHDC1-220ENST00000528402 KRTAP29-1A8MX34 341 aaPredicted RBP8.75□□□□□ -1.01
ECHDC1-220ENST00000528402 HRCT1Q6UXD1 115 aa8.75□□□□□ -1.01
ECHDC1-220ENST00000528402 Q96NJ1 140 aa8.75□□□□□ -1.01
ECHDC1-220ENST00000528402 CDK2AP2O75956 126 aa8.74□□□□□ -1.01
ECHDC1-220ENST00000528402 CASC2Q6XLA1 102 aa8.74□□□□□ -1.01
ECHDC1-220ENST00000528402 ASB16-AS1Q495Z4 193 aa8.73□□□□□ -1.01
ECHDC1-220ENST00000528402 CYSTM1Q9H1C7 97 aa8.73□□□□□ -1.01
ECHDC1-220ENST00000528402 A0A0U1RQV1 116 aa8.72□□□□□ -1.01
ECHDC1-220ENST00000528402 RPS28P62857 69 aaKnown RBP8.72□□□□□ -1.01
ECHDC1-220ENST00000528402 H7BZZ5 65 aa8.71□□□□□ -1.01
ECHDC1-220ENST00000528402 WFDC13Q8IUB5 93 aa8.71□□□□□ -1.01
ECHDC1-220ENST00000528402 PKD1P98161 4303 aa8.71□□□□□ -1.02
ECHDC1-220ENST00000528402 Q5XG85 94 aa8.7□□□□□ -1.02
ECHDC1-220ENST00000528402 SPINK6Q6UWN8 80 aa8.7□□□□□ -1.02
ECHDC1-220ENST00000528402 SNURFQ9Y675 71 aa8.7□□□□□ -1.02
ECHDC1-220ENST00000528402 A0A1B0GVY2 172 aa8.69□□□□□ -1.02
ECHDC1-220ENST00000528402 ATP5EP56381 51 aaPredicted RBP8.69□□□□□ -1.02
ECHDC1-220ENST00000528402 FAT2Q9NYQ8 4349 aa8.68□□□□□ -1.02
ECHDC1-220ENST00000528402 MMP24-AS1A0A0U1RRL7 71 aa8.68□□□□□ -1.02
ECHDC1-220ENST00000528402 A0A1B0GVX0 72 aa8.68□□□□□ -1.02
ECHDC1-220ENST00000528402 hDV103S1A0JD37 113 aa8.67□□□□□ -1.02
ECHDC1-220ENST00000528402 H3BPC8 53 aa8.67□□□□□ -1.02
ECHDC1-220ENST00000528402 FAM236DA0A1B0GTK5 79 aa8.66□□□□□ -1.02
ECHDC1-220ENST00000528402 FAM236CP0DP71 79 aa8.66□□□□□ -1.02
ECHDC1-220ENST00000528402 MP68P56378 58 aa8.66□□□□□ -1.02
ECHDC1-220ENST00000528402 TP53AIP1Q9HCN2 124 aa8.66□□□□□ -1.02
ECHDC1-220ENST00000528402 C8orf17Q9NRJ1 99 aa8.65□□□□□ -1.02
ECHDC1-220ENST00000528402 LCE2BO14633 110 aa8.64□□□□□ -1.03
ECHDC1-220ENST00000528402 KRTAP1-4P0C5Y4 121 aa8.64□□□□□ -1.03
ECHDC1-220ENST00000528402 KRTAP13-2Q52LG2 175 aa8.64□□□□□ -1.03
ECHDC1-220ENST00000528402 A0A087X002 238 aa8.63□□□□□ -1.03
ECHDC1-220ENST00000528402 LIMD2Q9BT23 127 aa8.63□□□□□ -1.03
ECHDC1-220ENST00000528402 PLA2G1BP04054 148 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 157.5 ms