RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 SEC61BP60468 96 aaKnown RBP4.59□□□□□ -1.68
CTNND1-216ENST00000527467 S4R3F8 94 aa4.58□□□□□ -1.68
CTNND1-216ENST00000527467 CENPFP49454 3210 aa4.58□□□□□ -1.68
CTNND1-216ENST00000527467 FLG2Q5D862 2391 aaPredicted RBP4.58□□□□□ -1.68
CTNND1-216ENST00000527467 M0R2T5 61 aa4.58□□□□□ -1.68
CTNND1-216ENST00000527467 KLK9Q2XQG4 91 aa4.57□□□□□ -1.68
CTNND1-216ENST00000527467 CHD7Q9P2D1 2997 aa4.56□□□□□ -1.68
CTNND1-216ENST00000527467 IGSF10Q6WRI0 2623 aa4.55□□□□□ -1.68
CTNND1-216ENST00000527467 ITPR3Q14573 2671 aa4.55□□□□□ -1.68
CTNND1-216ENST00000527467 A0A087WTM6 91 aa4.55□□□□□ -1.68
CTNND1-216ENST00000527467 CNBPP62633 177 aaKnown RBP4.54□□□□□ -1.68
CTNND1-216ENST00000527467 ZCCHC13Q8WW36 166 aaKnown RBP4.54□□□□□ -1.68
CTNND1-216ENST00000527467 BPTFQ12830 3046 aa4.54□□□□□ -1.68
CTNND1-216ENST00000527467 NDUFAF8A1L188 74 aa4.53□□□□□ -1.68
CTNND1-216ENST00000527467 OXTP01178 125 aa4.53□□□□□ -1.68
CTNND1-216ENST00000527467 FLNAP21333 2647 aaKnown RBP4.52□□□□□ -1.69
CTNND1-216ENST00000527467 MMP24-AS1A0A0U1RRL7 71 aa4.52□□□□□ -1.69
CTNND1-216ENST00000527467 SMR3BP02814 79 aaPredicted RBP4.52□□□□□ -1.69
CTNND1-216ENST00000527467 SPTBN5Q9NRC6 3674 aaKnown RBP4.51□□□□□ -1.69
CTNND1-216ENST00000527467 MGAM2Q2M2H8 2515 aa4.51□□□□□ -1.69
CTNND1-216ENST00000527467 C20orf166-AS1Q96NR2 134 aa4.51□□□□□ -1.69
CTNND1-216ENST00000527467 LINC00612Q8N6U2 182 aa4.5□□□□□ -1.69
CTNND1-216ENST00000527467 SETD2Q9BYW2 2564 aaPredicted RBP4.5□□□□□ -1.69
CTNND1-216ENST00000527467 CR1P17927 2039 aa4.5□□□□□ -1.69
CTNND1-216ENST00000527467 KRTAP25-1Q3LHN0 102 aa4.49□□□□□ -1.69
CTNND1-216ENST00000527467 Q5W150 140 aa4.49□□□□□ -1.69
CTNND1-216ENST00000527467 MKI67P46013 3256 aaKnown RBP4.49□□□□□ -1.69
CTNND1-216ENST00000527467 M0QZ58 72 aa4.49□□□□□ -1.69
CTNND1-216ENST00000527467 Q5VSD8 79 aa4.49□□□□□ -1.69
CTNND1-216ENST00000527467 CYSTM1Q9H1C7 97 aa4.49□□□□□ -1.69
CTNND1-216ENST00000527467 ATRQ13535 2644 aa4.49□□□□□ -1.69
CTNND1-216ENST00000527467 TEP1Q99973 2627 aaKnown RBP4.47□□□□□ -1.69
CTNND1-216ENST00000527467 KMT2BQ9UMN6 2715 aaPredicted RBP4.47□□□□□ -1.69
CTNND1-216ENST00000527467 REV3LO60673 3130 aa4.47□□□□□ -1.69
CTNND1-216ENST00000527467 GIG44P09565 113 aaPredicted RBP4.47□□□□□ -1.69
CTNND1-216ENST00000527467 SPATA8Q6RVD6 105 aa4.44□□□□□ -1.7
CTNND1-216ENST00000527467 Q8NDZ9 215 aa4.44□□□□□ -1.7
CTNND1-216ENST00000527467 STAB1Q9NY15 2570 aa4.42□□□□□ -1.7
CTNND1-216ENST00000527467 A6NN06 94 aa4.42□□□□□ -1.7
CTNND1-216ENST00000527467 WDR87Q6ZQQ6 2873 aa4.41□□□□□ -1.7
CTNND1-216ENST00000527467 COL6A5A8TX70 2615 aa4.41□□□□□ -1.7
CTNND1-216ENST00000527467 CDH23Q9H251 3354 aa4.4□□□□□ -1.71
CTNND1-216ENST00000527467 RANBP2P49792 3224 aaKnown RBP4.4□□□□□ -1.71
CTNND1-216ENST00000527467 SZT2Q5T011 3432 aa4.39□□□□□ -1.71
CTNND1-216ENST00000527467 LINC00472Q9H8W2 130 aa4.39□□□□□ -1.71
CTNND1-216ENST00000527467 ADM2Q7Z4H4 148 aa4.37□□□□□ -1.71
CTNND1-216ENST00000527467 PRUNE2Q8WUY3 3088 aa4.37□□□□□ -1.71
CTNND1-216ENST00000527467 LAMA3Q16787 3333 aa4.37□□□□□ -1.71
CTNND1-216ENST00000527467 XIRP2A4UGR9 3374 aa4.36□□□□□ -1.71
CTNND1-216ENST00000527467 Q6ZR54 194 aa4.35□□□□□ -1.71
CTNND1-216ENST00000527467 SPRR1BP22528 89 aa4.33□□□□□ -1.72
CTNND1-216ENST00000527467 PANO1I0J062 215 aa4.33□□□□□ -1.72
CTNND1-216ENST00000527467 C10orf95Q9H7T3 257 aa4.32□□□□□ -1.72
CTNND1-216ENST00000527467 SPRR1AP35321 89 aa4.31□□□□□ -1.72
CTNND1-216ENST00000527467 COL6A3P12111 3177 aa4.3□□□□□ -1.72
CTNND1-216ENST00000527467 A0A087X002 238 aa4.3□□□□□ -1.72
CTNND1-216ENST00000527467 C5orf42Q9H799 3197 aa4.3□□□□□ -1.72
CTNND1-216ENST00000527467 KRTAP26-1Q6PEX3 210 aa4.3□□□□□ -1.72
CTNND1-216ENST00000527467 A8MU10 97 aa4.28□□□□□ -1.72
CTNND1-216ENST00000527467 PLAC8Q9NZF1 115 aa4.28□□□□□ -1.72
CTNND1-216ENST00000527467 UNC80Q8N2C7 3258 aa4.27□□□□□ -1.73
CTNND1-216ENST00000527467 PP632Q6XCG6 107 aa4.27□□□□□ -1.73
CTNND1-216ENST00000527467 EYSQ5T1H1 3165 aa4.26□□□□□ -1.73
CTNND1-216ENST00000527467 DMBT1Q9UGM3 2413 aaPredicted RBP4.26□□□□□ -1.73
CTNND1-216ENST00000527467 NOTCH1P46531 2555 aa4.26□□□□□ -1.73
CTNND1-216ENST00000527467 A8MUU9 505 aa4.26□□□□□ -1.73
CTNND1-216ENST00000527467 TNP1P09430 55 aa4.25□□□□□ -1.73
CTNND1-216ENST00000527467 ASH1LQ9NR48 2969 aaKnown RBP4.25□□□□□ -1.73
CTNND1-216ENST00000527467 HIVEP1P15822 2718 aa4.25□□□□□ -1.73
CTNND1-216ENST00000527467 AKAP13Q12802 2813 aa4.24□□□□□ -1.73
CTNND1-216ENST00000527467 LAMA2P24043 3122 aaKnown RBP4.23□□□□□ -1.73
CTNND1-216ENST00000527467 UBR5O95071 2799 aaPredicted RBP4.23□□□□□ -1.73
CTNND1-216ENST00000527467 TENM4Q6N022 2769 aa4.23□□□□□ -1.73
CTNND1-216ENST00000527467 KRTAP29-1A8MX34 341 aaPredicted RBP4.23□□□□□ -1.73
CTNND1-216ENST00000527467 KRTAP11-1Q8IUC1 163 aa4.23□□□□□ -1.73
CTNND1-216ENST00000527467 KRTAP10-1P60331 282 aa4.23□□□□□ -1.73
CTNND1-216ENST00000527467 ITPR2Q14571 2701 aa4.22□□□□□ -1.73
CTNND1-216ENST00000527467 NBEAL1Q6ZS30 2694 aa4.21□□□□□ -1.74
CTNND1-216ENST00000527467 TEX15Q9BXT5 2789 aa4.21□□□□□ -1.74
CTNND1-216ENST00000527467 DSPP15924 2871 aaKnown RBP4.2□□□□□ -1.74
CTNND1-216ENST00000527467 CENPEQ02224 2701 aa4.2□□□□□ -1.74
CTNND1-216ENST00000527467 KRTAP10-2P60368 255 aa4.19□□□□□ -1.74
CTNND1-216ENST00000527467 KRTAP4-16G5E9R7 235 aaPredicted RBP4.18□□□□□ -1.74
CTNND1-216ENST00000527467 STAB2Q8WWQ8 2551 aa4.16□□□□□ -1.74
CTNND1-216ENST00000527467 DMDP11532 3685 aa4.14□□□□□ -1.75
CTNND1-216ENST00000527467 MUC3AQ02505 3323 aa4.14□□□□□ -1.75
CTNND1-216ENST00000527467 USP34Q70CQ2 3546 aa4.12□□□□□ -1.75
CTNND1-216ENST00000527467 MYO15AQ9UKN7 3530 aa4.12□□□□□ -1.75
CTNND1-216ENST00000527467 NSD1Q96L73 2696 aaPredicted RBP4.12□□□□□ -1.75
CTNND1-216ENST00000527467 P0C880 135 aa4.12□□□□□ -1.75
CTNND1-216ENST00000527467 TRIOO75962 3097 aa4.11□□□□□ -1.75
CTNND1-216ENST00000527467 BSNQ9UPA5 3926 aa4.08□□□□□ -1.76
CTNND1-216ENST00000527467 PRRC2CQ9Y520 2896 aaKnown RBP4.08□□□□□ -1.76
CTNND1-216ENST00000527467 NOTCH2NLQ7Z3S9 236 aa4.08□□□□□ -1.76
CTNND1-216ENST00000527467 A0A0C4DFX4 3053 aa4.07□□□□□ -1.76
CTNND1-216ENST00000527467 KRTAP1-5Q9BYS1 174 aa4.07□□□□□ -1.76
CTNND1-216ENST00000527467 RPS29P62273 56 aaKnown RBP4.07□□□□□ -1.76
CTNND1-216ENST00000527467 FLNCQ14315 2725 aa4.06□□□□□ -1.76
CTNND1-216ENST00000527467 DMXL1Q9Y485 3027 aa4.06□□□□□ -1.76
CTNND1-216ENST00000527467 LCE2DQ5TA82 110 aaPredicted RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms