RNA–Protein interactions for RNA: ENST00000527203.5

FGFR1-231, Transcript of fibroblast growth factor receptor 1, human

TSL 3

Gene FGFR1, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-231	ENST00000527203	TRBV7-6	A0A0J9YX20	115 aa		6.14	□□□□□ -1.43
FGFR1-231	ENST00000527203	C20orf202	A1L168	122 aa		6.13	□□□□□ -1.43
FGFR1-231	ENST00000527203	SMIM11B	Q8TCY0	68 aa		6.13	□□□□□ -1.43
FGFR1-231	ENST00000527203	IFITM1	P13164	125 aa		6.12	□□□□□ -1.43
FGFR1-231	ENST00000527203	COA6	Q5JTJ3	125 aa	Known RBP	6.12	□□□□□ -1.43
FGFR1-231	ENST00000527203	CRCT1	Q9UGL9	99 aa		6.12	□□□□□ -1.43
FGFR1-231	ENST00000527203	RPL37	P61927	97 aa	Known RBP	6.11	□□□□□ -1.43
FGFR1-231	ENST00000527203		Q5XG85	94 aa		6.1	□□□□□ -1.43
FGFR1-231	ENST00000527203	COPS9	Q8WXC6	57 aa		6.1	□□□□□ -1.43
FGFR1-231	ENST00000527203	TRAV13-2	A0A0B4J235	113 aa		6.08	□□□□□ -1.44
FGFR1-231	ENST00000527203	KRTAP10-6	P60371	365 aa	Predicted RBP	6.08	□□□□□ -1.44
FGFR1-231	ENST00000527203		Q6ZVH6	145 aa		6.08	□□□□□ -1.44
FGFR1-231	ENST00000527203	NHP2	Q9NX24	153 aa	Known RBP	6.08	□□□□□ -1.44
FGFR1-231	ENST00000527203		A4D1N5	150 aa		6.07	□□□□□ -1.44
FGFR1-231	ENST00000527203		F8WEM9	126 aa		6.07	□□□□□ -1.44
FGFR1-231	ENST00000527203	COX6B2	Q6YFQ2	88 aa		6.07	□□□□□ -1.44
FGFR1-231	ENST00000527203		Q6ZQY7	126 aa		6.07	□□□□□ -1.44
FGFR1-231	ENST00000527203		M0R2T5	61 aa		6.06	□□□□□ -1.44
FGFR1-231	ENST00000527203	CFC1B	P0CG36	223 aa		6.06	□□□□□ -1.44
FGFR1-231	ENST00000527203	C12orf57	Q99622	126 aa		6.06	□□□□□ -1.44
FGFR1-231	ENST00000527203	TCL1B	O95988	128 aa		6.05	□□□□□ -1.44
FGFR1-231	ENST00000527203	LINC00575	Q6W349	94 aa		6.05	□□□□□ -1.44
FGFR1-231	ENST00000527203	FLG	P20930	4061 aa	Predicted RBP	6.04	□□□□□ -1.44
FGFR1-231	ENST00000527203	IGFL1	Q6UW32	110 aa		6.04	□□□□□ -1.44
FGFR1-231	ENST00000527203	hADV29S1	A0JD25	119 aa		6.03	□□□□□ -1.44
FGFR1-231	ENST00000527203	TRBV7-7	A0A0K0K1E9	115 aa		6.02	□□□□□ -1.45
FGFR1-231	ENST00000527203	VAMP3	Q15836	100 aa		6.02	□□□□□ -1.45
FGFR1-231	ENST00000527203	CLEC2B	Q92478	149 aa		6.02	□□□□□ -1.45
FGFR1-231	ENST00000527203	OBSCN-AS1	Q96MR7	158 aa		6.02	□□□□□ -1.45
FGFR1-231	ENST00000527203		H3BUT2	72 aa		6.01	□□□□□ -1.45
FGFR1-231	ENST00000527203	HIST3H2BB	Q8N257	126 aa		6.01	□□□□□ -1.45
FGFR1-231	ENST00000527203	HIST1H2BL	Q99880	126 aa		6.01	□□□□□ -1.45
FGFR1-231	ENST00000527203	HSBP1L1	C9JCN9	74 aa		5.99	□□□□□ -1.45
FGFR1-231	ENST00000527203	S100A2	P29034	98 aa		5.99	□□□□□ -1.45
FGFR1-231	ENST00000527203	SNRPE	P62304	92 aa	Known RBP	5.99	□□□□□ -1.45
FGFR1-231	ENST00000527203		Q6JHZ5	121 aa		5.99	□□□□□ -1.45
FGFR1-231	ENST00000527203		Q6Q795	121 aa		5.99	□□□□□ -1.45
FGFR1-231	ENST00000527203	OCIAD2	Q56VL3	154 aa		5.98	□□□□□ -1.45
FGFR1-231	ENST00000527203	KRTAP9-9	Q9BYP9	154 aa		5.98	□□□□□ -1.45
FGFR1-231	ENST00000527203	KRTAP9-4	Q9BYQ2	154 aa		5.98	□□□□□ -1.45
FGFR1-231	ENST00000527203	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	5.96	□□□□□ -1.46
FGFR1-231	ENST00000527203	HIST1H4G	Q99525	98 aa		5.96	□□□□□ -1.46
FGFR1-231	ENST00000527203	SNHG12	Q9BXW3	62 aa		5.95	□□□□□ -1.46
FGFR1-231	ENST00000527203	BVES-AS1	Q5T3Y7	98 aa		5.94	□□□□□ -1.46
FGFR1-231	ENST00000527203	ATP11AUN	Q6ZP68	121 aa		5.94	□□□□□ -1.46
FGFR1-231	ENST00000527203		Q75L30	129 aa		5.94	□□□□□ -1.46
FGFR1-231	ENST00000527203		Q96NJ1	140 aa		5.94	□□□□□ -1.46
FGFR1-231	ENST00000527203	LST1	O00453	97 aa		5.93	□□□□□ -1.46
FGFR1-231	ENST00000527203	SCGB1D1	O95968	90 aa		5.93	□□□□□ -1.46
FGFR1-231	ENST00000527203	FAM218A	Q96MZ4	157 aa		5.92	□□□□□ -1.46
FGFR1-231	ENST00000527203	S100A6	P06703	90 aa		5.9	□□□□□ -1.46
FGFR1-231	ENST00000527203	CFC1	P0CG37	223 aa		5.9	□□□□□ -1.46
FGFR1-231	ENST00000527203	COX8A	P10176	69 aa		5.9	□□□□□ -1.46
FGFR1-231	ENST00000527203	PPDPFL	Q8WWR9	84 aa		5.9	□□□□□ -1.46
FGFR1-231	ENST00000527203		A0A087WSZ3	146 aa		5.89	□□□□□ -1.47
FGFR1-231	ENST00000527203	LCE4A	Q5TA78	99 aa		5.89	□□□□□ -1.47
FGFR1-231	ENST00000527203	RAB37	Q96AX2	223 aa		5.89	□□□□□ -1.47
FGFR1-231	ENST00000527203	C14orf144	Q96I85	54 aa		5.89	□□□□□ -1.47
FGFR1-231	ENST00000527203	DSCR10	P59022	87 aa		5.88	□□□□□ -1.47
FGFR1-231	ENST00000527203		A0A1B0GV72	72 aa		5.87	□□□□□ -1.47
FGFR1-231	ENST00000527203	NDUFV3	P56181	108 aa	Known RBP	5.87	□□□□□ -1.47
FGFR1-231	ENST00000527203	SS18L2	Q9UHA2	77 aa		5.87	□□□□□ -1.47
FGFR1-231	ENST00000527203	PAM16	Q9Y3D7	125 aa		5.87	□□□□□ -1.47
FGFR1-231	ENST00000527203	KRTAP4-8	A0A0G2JLE6	195 aa		5.86	□□□□□ -1.47
FGFR1-231	ENST00000527203	TEN1	Q86WV5	123 aa		5.86	□□□□□ -1.47
FGFR1-231	ENST00000527203	C20orf166-AS1	Q96NR2	134 aa		5.86	□□□□□ -1.47
FGFR1-231	ENST00000527203	SPATA45	Q537H7	98 aa		5.85	□□□□□ -1.47
FGFR1-231	ENST00000527203	C2orf91	Q6ZV80	131 aa		5.85	□□□□□ -1.47
FGFR1-231	ENST00000527203	SIGMAR1	Q99720	223 aa		5.85	□□□□□ -1.47
FGFR1-231	ENST00000527203	KRTAP3-1	Q9BYR8	98 aa		5.85	□□□□□ -1.47
FGFR1-231	ENST00000527203		A0A0B4J2C4	111 aa		5.84	□□□□□ -1.47
FGFR1-231	ENST00000527203	KRTAP9-7	A8MTY7	169 aa		5.84	□□□□□ -1.47
FGFR1-231	ENST00000527203		A8MUU9	505 aa		5.84	□□□□□ -1.47
FGFR1-231	ENST00000527203		H3BMG7	143 aa		5.84	□□□□□ -1.47
FGFR1-231	ENST00000527203	DLEU1	O43261	78 aa		5.84	□□□□□ -1.47
FGFR1-231	ENST00000527203	FABP2	P12104	132 aa		5.84	□□□□□ -1.47
FGFR1-231	ENST00000527203		A0A1W2PNM2	257 aa		5.82	□□□□□ -1.48
FGFR1-231	ENST00000527203	KRTAP23-1	A1A580	65 aa		5.82	□□□□□ -1.48
FGFR1-231	ENST00000527203		H0YGX0	51 aa		5.82	□□□□□ -1.48
FGFR1-231	ENST00000527203	USH2A	O75445	5202 aa		5.81	□□□□□ -1.48
FGFR1-231	ENST00000527203	KRTAP16-1	A8MUX0	517 aa		5.81	□□□□□ -1.48
FGFR1-231	ENST00000527203	SNCG	O76070	127 aa		5.81	□□□□□ -1.48
FGFR1-231	ENST00000527203	LCE1D	Q5T752	114 aa		5.81	□□□□□ -1.48
FGFR1-231	ENST00000527203	KRTAP9-8	Q9BYQ0	159 aa		5.81	□□□□□ -1.48
FGFR1-231	ENST00000527203	HIGD1B	Q9P298	99 aa		5.81	□□□□□ -1.48
FGFR1-231	ENST00000527203	TRIAP1	O43715	76 aa		5.8	□□□□□ -1.48
FGFR1-231	ENST00000527203	FXYD2	P54710	66 aa		5.8	□□□□□ -1.48
FGFR1-231	ENST00000527203	CEND1	Q8N111	149 aa		5.8	□□□□□ -1.48
FGFR1-231	ENST00000527203	SSPO	A2VEC9	5147 aa		5.79	□□□□□ -1.48
FGFR1-231	ENST00000527203	TRBV20-1	A0A075B6N2	111 aa		5.79	□□□□□ -1.48
FGFR1-231	ENST00000527203	DEFB116	Q30KQ4	102 aa		5.79	□□□□□ -1.48
FGFR1-231	ENST00000527203	VAMP8	Q9BV40	100 aa		5.79	□□□□□ -1.48
FGFR1-231	ENST00000527203	S100A1	P23297	94 aa		5.78	□□□□□ -1.48
FGFR1-231	ENST00000527203	NOTCH2NL	Q7Z3S9	236 aa		5.78	□□□□□ -1.48
FGFR1-231	ENST00000527203	PRO1854	Q9UHT4	67 aa		5.78	□□□□□ -1.48
FGFR1-231	ENST00000527203	FAM236D	A0A1B0GTK5	79 aa		5.77	□□□□□ -1.49
FGFR1-231	ENST00000527203		K7ERJ3	54 aa		5.77	□□□□□ -1.49
FGFR1-231	ENST00000527203	IGKV4-1	P06312	121 aa		5.77	□□□□□ -1.49
FGFR1-231	ENST00000527203	FAM236C	P0DP71	79 aa		5.77	□□□□□ -1.49
FGFR1-231	ENST00000527203		A0A1B0GX51	115 aa		5.75	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 46 ms