RNA–Protein interactions for RNA: ENST00000521545.6

LAPTM4B-203, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4B, Length 915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-203ENST00000521545 C12orf57Q99622 126 aa13.96□□□□□ -0.17
LAPTM4B-203ENST00000521545 BVES-AS1Q5T3Y7 98 aa13.95□□□□□ -0.18
LAPTM4B-203ENST00000521545 LCE2CQ5TA81 110 aa13.94□□□□□ -0.18
LAPTM4B-203ENST00000521545 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.94□□□□□ -0.18
LAPTM4B-203ENST00000521545 OCIAD2Q56VL3 154 aa13.93□□□□□ -0.18
LAPTM4B-203ENST00000521545 COX8AP10176 69 aa13.92□□□□□ -0.18
LAPTM4B-203ENST00000521545 CLEC2BQ92478 149 aa13.92□□□□□ -0.18
LAPTM4B-203ENST00000521545 RPL37P61927 97 aaKnown RBP13.91□□□□□ -0.18
LAPTM4B-203ENST00000521545 IGFL1Q6UW32 110 aa13.9□□□□□ -0.18
LAPTM4B-203ENST00000521545 PPDPFLQ8WWR9 84 aa13.9□□□□□ -0.18
LAPTM4B-203ENST00000521545 SNHG12Q9BXW3 62 aa13.9□□□□□ -0.18
LAPTM4B-203ENST00000521545 TRBV7-7A0A0K0K1E9 115 aa13.88□□□□□ -0.19
LAPTM4B-203ENST00000521545 KRTAP9-6A0A140TA67 174 aa13.88□□□□□ -0.19
LAPTM4B-203ENST00000521545 KRTAP19-2Q3LHN2 52 aa13.88□□□□□ -0.19
LAPTM4B-203ENST00000521545 DLEU1O43261 78 aa13.86□□□□□ -0.19
LAPTM4B-203ENST00000521545 SNCGO76070 127 aa13.84□□□□□ -0.19
LAPTM4B-203ENST00000521545 RAB37Q96AX2 223 aa13.83□□□□□ -0.2
LAPTM4B-203ENST00000521545 MT1HP80294 61 aa13.81□□□□□ -0.2
LAPTM4B-203ENST00000521545 LCE2DQ5TA82 110 aaPredicted RBP13.81□□□□□ -0.2
LAPTM4B-203ENST00000521545 CFC1BP0CG36 223 aa13.8□□□□□ -0.2
LAPTM4B-203ENST00000521545 CFC1P0CG37 223 aa13.8□□□□□ -0.2
LAPTM4B-203ENST00000521545 C14orf144Q96I85 54 aa13.8□□□□□ -0.2
LAPTM4B-203ENST00000521545 H3BUT2 72 aa13.77□□□□□ -0.21
LAPTM4B-203ENST00000521545 HIGD1BQ9P298 99 aa13.77□□□□□ -0.21
LAPTM4B-203ENST00000521545 H0YGX0 51 aa13.76□□□□□ -0.21
LAPTM4B-203ENST00000521545 PAM16Q9Y3D7 125 aa13.76□□□□□ -0.21
LAPTM4B-203ENST00000521545 LST1O00453 97 aa13.75□□□□□ -0.21
LAPTM4B-203ENST00000521545 SPATA45Q537H7 98 aa13.75□□□□□ -0.21
LAPTM4B-203ENST00000521545 A0A0B4J2C4 111 aa13.73□□□□□ -0.21
LAPTM4B-203ENST00000521545 COX6B2Q6YFQ2 88 aa13.72□□□□□ -0.21
LAPTM4B-203ENST00000521545 OBSCN-AS1Q96MR7 158 aa13.72□□□□□ -0.21
LAPTM4B-203ENST00000521545 VAMP8Q9BV40 100 aa13.71□□□□□ -0.21
LAPTM4B-203ENST00000521545 SS18L2Q9UHA2 77 aa13.69□□□□□ -0.22
LAPTM4B-203ENST00000521545 ATP11AUNQ6ZP68 121 aa13.68□□□□□ -0.22
LAPTM4B-203ENST00000521545 NDUFV3P56181 108 aaKnown RBP13.67□□□□□ -0.22
LAPTM4B-203ENST00000521545 GHRHP01286 108 aa13.66□□□□□ -0.22
LAPTM4B-203ENST00000521545 Q6Q795 121 aa13.66□□□□□ -0.22
LAPTM4B-203ENST00000521545 C2orf91Q6ZV80 131 aa13.66□□□□□ -0.22
LAPTM4B-203ENST00000521545 FAM218AQ96MZ4 157 aa13.66□□□□□ -0.22
LAPTM4B-203ENST00000521545 M0R2T5 61 aa13.65□□□□□ -0.22
LAPTM4B-203ENST00000521545 Q75L30 129 aa13.65□□□□□ -0.22
LAPTM4B-203ENST00000521545 TEN1Q86WV5 123 aa13.65□□□□□ -0.22
LAPTM4B-203ENST00000521545 CEND1Q8N111 149 aa13.65□□□□□ -0.22
LAPTM4B-203ENST00000521545 TMEM238LA0A1B0GVL6 79 aa13.64□□□□□ -0.23
LAPTM4B-203ENST00000521545 A6NJY4 79 aa13.64□□□□□ -0.23
LAPTM4B-203ENST00000521545 PRO1854Q9UHT4 67 aa13.64□□□□□ -0.23
LAPTM4B-203ENST00000521545 A0A1B0GX51 115 aa13.62□□□□□ -0.23
LAPTM4B-203ENST00000521545 Q96NJ1 140 aa13.61□□□□□ -0.23
LAPTM4B-203ENST00000521545 H3BMG7 143 aa13.6□□□□□ -0.23
LAPTM4B-203ENST00000521545 FABP2P12104 132 aa13.6□□□□□ -0.23
LAPTM4B-203ENST00000521545 KRTAP10-6P60371 365 aaPredicted RBP13.58□□□□□ -0.24
LAPTM4B-203ENST00000521545 A0A087WSZ3 146 aa13.56□□□□□ -0.24
LAPTM4B-203ENST00000521545 LORP23490 312 aaPredicted RBP13.56□□□□□ -0.24
LAPTM4B-203ENST00000521545 FXYD2P54710 66 aa13.54□□□□□ -0.24
LAPTM4B-203ENST00000521545 CRCT1Q9UGL9 99 aa13.52□□□□□ -0.25
LAPTM4B-203ENST00000521545 TRIAP1O43715 76 aa13.51□□□□□ -0.25
LAPTM4B-203ENST00000521545 C20orf166-AS1Q96NR2 134 aa13.48□□□□□ -0.25
LAPTM4B-203ENST00000521545 DNAL4O96015 105 aa13.47□□□□□ -0.25
LAPTM4B-203ENST00000521545 H3BQ85 93 aa13.45□□□□□ -0.26
LAPTM4B-203ENST00000521545 A0A1W2PNM2 257 aa13.44□□□□□ -0.26
LAPTM4B-203ENST00000521545 A8MUU9 505 aa13.44□□□□□ -0.26
LAPTM4B-203ENST00000521545 PSMB2P49721 201 aa13.44□□□□□ -0.26
LAPTM4B-203ENST00000521545 ORMDL1Q9P0S3 153 aa13.44□□□□□ -0.26
LAPTM4B-203ENST00000521545 HSD52Q0P140 79 aa13.43□□□□□ -0.26
LAPTM4B-203ENST00000521545 ANKRD29Q8N6D5 301 aa13.43□□□□□ -0.26
LAPTM4B-203ENST00000521545 FLGP20930 4061 aaPredicted RBP13.42□□□□□ -0.26
LAPTM4B-203ENST00000521545 SIGMAR1Q99720 223 aa13.42□□□□□ -0.26
LAPTM4B-203ENST00000521545 COX6CP09669 75 aa13.41□□□□□ -0.26
LAPTM4B-203ENST00000521545 FSIP2Q5CZC0 6907 aa13.39□□□□□ -0.27
LAPTM4B-203ENST00000521545 DSCR10P59022 87 aa13.39□□□□□ -0.27
LAPTM4B-203ENST00000521545 TRBV7-4A0A0J9YYF1 115 aa13.38□□□□□ -0.27
LAPTM4B-203ENST00000521545 PYY3Q5JQD4 70 aa13.38□□□□□ -0.27
LAPTM4B-203ENST00000521545 A0A1B0GV72 72 aa13.37□□□□□ -0.27
LAPTM4B-203ENST00000521545 TMEM256-PLSCR3K7ERE1 68 aa13.37□□□□□ -0.27
LAPTM4B-203ENST00000521545 K7ERJ3 54 aa13.36□□□□□ -0.27
LAPTM4B-203ENST00000521545 TRBV20-1A0A075B6N2 111 aa13.35□□□□□ -0.27
LAPTM4B-203ENST00000521545 IGKV4-1P06312 121 aa13.35□□□□□ -0.27
LAPTM4B-203ENST00000521545 LINC00313P59037 77 aa13.34□□□□□ -0.27
LAPTM4B-203ENST00000521545 CCKP06307 115 aa13.29□□□□□ -0.28
LAPTM4B-203ENST00000521545 TRACP01848 142 aa13.28□□□□□ -0.28
LAPTM4B-203ENST00000521545 UQCR10Q9UDW1 63 aa13.28□□□□□ -0.28
LAPTM4B-203ENST00000521545 UBE2V1Q13404 147 aa13.27□□□□□ -0.29
LAPTM4B-203ENST00000521545 DEFB116Q30KQ4 102 aa13.24□□□□□ -0.29
LAPTM4B-203ENST00000521545 SCGB1C2P0DMR2 95 aa13.23□□□□□ -0.29
LAPTM4B-203ENST00000521545 LINC00472Q9H8W2 130 aa13.23□□□□□ -0.29
LAPTM4B-203ENST00000521545 KRTAP16-1A8MUX0 517 aa13.2□□□□□ -0.3
LAPTM4B-203ENST00000521545 VPS25Q9BRG1 176 aa13.19□□□□□ -0.3
LAPTM4B-203ENST00000521545 IGHV6-1A0A0B4J1U7 121 aa13.18□□□□□ -0.3
LAPTM4B-203ENST00000521545 NOTCH2NLQ7Z3S9 236 aa13.18□□□□□ -0.3
LAPTM4B-203ENST00000521545 RBM3P98179 157 aaKnown RBP13.17□□□□□ -0.3
LAPTM4B-203ENST00000521545 TMA7Q9Y2S6 64 aaKnown RBP13.16□□□□□ -0.3
LAPTM4B-203ENST00000521545 DSCR8Q96T75 97 aa13.15□□□□□ -0.3
LAPTM4B-203ENST00000521545 FAM236DA0A1B0GTK5 79 aa13.13□□□□□ -0.31
LAPTM4B-203ENST00000521545 FAM236CP0DP71 79 aa13.13□□□□□ -0.31
LAPTM4B-203ENST00000521545 C8orf87E5RJ46 101 aa13.09□□□□□ -0.31
LAPTM4B-203ENST00000521545 BAALC-AS2P0C853 105 aa13.09□□□□□ -0.31
LAPTM4B-203ENST00000521545 C21orf62-AS1Q17RA5 79 aa13.08□□□□□ -0.32
LAPTM4B-203ENST00000521545 RBM12B-AS1Q9P1G2 102 aa13.08□□□□□ -0.32
LAPTM4B-203ENST00000521545 A0A1B0GVX0 72 aa13.07□□□□□ -0.32
LAPTM4B-203ENST00000521545 C9JAW5 83 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms